RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 SCRT1Q9BWW7 348 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 PECRQ9BY49 303 aa1.1□□□□□ -2.23
XRN1-214ENST00000498077 RBM7Q9Y580 266 aaKnown RBP1.1□□□□□ -2.23
XRN1-214ENST00000498077 KCNE1BA0A087WTH5 132 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 OR7A17O14581 309 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 GEMIN2O14893 280 aaKnown RBP1.09□□□□□ -2.23
XRN1-214ENST00000498077 ZNF73O43830 326 aaPredicted RBP1.09□□□□□ -2.23
XRN1-214ENST00000498077 C1orf105O95561 183 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 MT-CO3P00414 261 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 HIST1H2AGP0C0S8 130 aaPredicted RBP1.09□□□□□ -2.23
XRN1-214ENST00000498077 CRYGAP11844 174 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 HIST1H2ADP20671 130 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 KIAA1024LP59773 190 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 UBE2L3P68036 154 aaKnown RBP1.09□□□□□ -2.23
XRN1-214ENST00000498077 DIAPH2-AS1Q14236 149 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 LINC00303Q3SY05 128 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 TCTEX1D4Q5JR98 221 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 ANXA8L1Q5VT79 327 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 HIST2H2AA3Q6FI13 130 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 C22orf42Q6IC83 251 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 C1orf122Q6ZSJ8 110 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 CYP2G1PQ6ZSU1 146 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 COA5Q86WW8 74 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 PQLC3Q8N755 202 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 MYLPFQ96A32 169 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 KIR2DL4Q99706 377 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 SFXN3Q9BWM7 321 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 IFT22Q9H7X7 185 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 NUDT15Q9NV35 164 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 DSTQ03001 7570 aaKnown RBP1.09□□□□□ -2.23
XRN1-214ENST00000498077 CROCCQ5TZA2 2017 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 WDR19Q8NEZ3 1342 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 RYR1P21817 5038 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 TRAV12-1A0A0B4J245 112 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 hCG_38984A0A1B0GV85 526 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 A0A1W2PNV4 684 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 FOXI3A8MTJ6 420 aaPredicted RBP1.09□□□□□ -2.23
XRN1-214ENST00000498077 CLDN34H7C241 214 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 J3QT63 122 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 ARPC3O15145 178 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 BUD23O43709 281 aaKnown RBP1.09□□□□□ -2.23
XRN1-214ENST00000498077 TYROBPO43914 113 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 SERF1AO75920 110 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 FTH1P02794 183 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 CST2P09228 141 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 OMGP23515 440 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 BDKRB1P46663 353 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 PSMB3P49720 205 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 SELENOVP59797 346 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 VSNL1P62760 191 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 BTG2P78543 158 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 DNASE1L3Q13609 305 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 TMEM41BQ5BJD5 291 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 HACD4Q5VWC8 232 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 LANCL3Q6ZV70 420 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 GPHB5Q86YW7 130 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 UBE2DNLQ8IWF7 75 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 SLC25A29Q8N8R3 303 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 PRR26Q8N8Z3 221 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 OR4A4PQ8NGN8 299 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 OBSCN-AS1Q96MR7 158 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 WFIKKN1Q96NZ8 548 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 LYSMD1Q96S90 227 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 AMELXQ99217 191 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 AICDAQ9GZX7 198 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 MS4A6AQ9H2W1 248 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 RHOJQ9H4E5 214 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 TRABDQ9H4I3 376 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 GSTK1Q9Y2Q3 226 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 PCNTO95613 3336 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 CUBNO60494 3623 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 A0A096LNI7 61 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 TGIF2-C20orf24A0A0A6YYL0 155 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 A0A0J9YW62 118 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 TEX50A0A1B0GTY4 177 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 hADV29S1A0JD25 119 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 MAP1LC3B2A6NCE7 125 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 PGPEP1LA6NFU8 196 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 BLOC1S5-TXNDC5H3BN57 136 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 SLC25A20O43772 301 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 HUS1O60921 280 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 TCRAP04437 139 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 TYMSP04818 313 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 CFC1BP0CG36 223 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 CFC1P0CG37 223 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 CD27P26842 260 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 SERPINB5P36952 375 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 KLK7P49862 253 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 S100A12P80511 92 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 DOC2AQ14183 400 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 EFNB3Q15768 340 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 C6orf99Q4VX62 202 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 CD200R1LQ6Q8B3 271 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 BOD1L2Q8IYS8 172 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 SLC7A5P1Q8MH63 180 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 C14orf178Q8N769 122 aaPredicted RBP1.09□□□□□ -2.23
XRN1-214ENST00000498077 KLHDC9Q8NEP7 349 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 OR52R1Q8NGF1 315 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 OR9G4Q8NGQ1 327 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 OR2V1Q8NHB1 315 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms