RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 RPRD2Q5VT52 1461 aaKnown RBP2.03□□□□□ -2.08
CLK1-214ENST00000496205 A0A087WUU8 490 aa2.03□□□□□ -2.08
CLK1-214ENST00000496205 TRAV38-1A0A0B4J264 116 aa2.03□□□□□ -2.08
CLK1-214ENST00000496205 A6NED7 52 aa2.03□□□□□ -2.08
CLK1-214ENST00000496205 ARL5CA6NH57 179 aa2.03□□□□□ -2.08
CLK1-214ENST00000496205 C17orf51A8MQB3 221 aa2.03□□□□□ -2.08
CLK1-214ENST00000496205 A8MWP6 167 aa2.03□□□□□ -2.08
CLK1-214ENST00000496205 M0QZK8 103 aa2.03□□□□□ -2.08
CLK1-214ENST00000496205 OR2J2O76002 312 aa2.03□□□□□ -2.08
CLK1-214ENST00000496205 GADD45GO95257 159 aa2.03□□□□□ -2.08
CLK1-214ENST00000496205 FAM107AO95990 144 aa2.03□□□□□ -2.08
CLK1-214ENST00000496205 PPBPP02775 128 aa2.03□□□□□ -2.08
CLK1-214ENST00000496205 TRGV3P03979 118 aa2.03□□□□□ -2.08
CLK1-214ENST00000496205 HIST1H2BOP23527 126 aa2.03□□□□□ -2.08
CLK1-214ENST00000496205 HIST1H2BBP33778 126 aa2.03□□□□□ -2.08
CLK1-214ENST00000496205 GABRA2P47869 451 aa2.03□□□□□ -2.08
CLK1-214ENST00000496205 RAB13P51153 203 aa2.03□□□□□ -2.08
CLK1-214ENST00000496205 RWDD2BP57060 319 aa2.03□□□□□ -2.08
CLK1-214ENST00000496205 HIST1H2BDP58876 126 aa2.03□□□□□ -2.08
CLK1-214ENST00000496205 HIST1H2BCP62807 126 aa2.03□□□□□ -2.08
CLK1-214ENST00000496205 HIST2H2BEQ16778 126 aa2.03□□□□□ -2.08
CLK1-214ENST00000496205 DEFB115Q30KQ5 88 aa2.03□□□□□ -2.08
CLK1-214ENST00000496205 LGALS9BQ3B8N2 356 aa2.03□□□□□ -2.08
CLK1-214ENST00000496205 KRTAP13-2Q52LG2 175 aa2.03□□□□□ -2.08
CLK1-214ENST00000496205 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.03□□□□□ -2.08
CLK1-214ENST00000496205 TMEM69Q5SWH9 247 aa2.03□□□□□ -2.08
CLK1-214ENST00000496205 SAMD13Q5VXD3 122 aa2.03□□□□□ -2.08
CLK1-214ENST00000496205 LGALS9CQ6DKI2 356 aa2.03□□□□□ -2.08
CLK1-214ENST00000496205 SLC25A34Q6PIV7 304 aa2.03□□□□□ -2.08
CLK1-214ENST00000496205 C10orf126Q8N4M7 172 aa2.03□□□□□ -2.08
CLK1-214ENST00000496205 OR13D1Q8NGV5 346 aa2.03□□□□□ -2.08
CLK1-214ENST00000496205 ZNF675Q8TD23 568 aa2.03□□□□□ -2.08
CLK1-214ENST00000496205 MAFIPQ8WZ33 124 aa2.03□□□□□ -2.08
CLK1-214ENST00000496205 KLK6Q92876 244 aa2.03□□□□□ -2.08
CLK1-214ENST00000496205 HIST1H2BHQ93079 126 aa2.03□□□□□ -2.08
CLK1-214ENST00000496205 MGLLQ99685 303 aa2.03□□□□□ -2.08
CLK1-214ENST00000496205 HIST1H2BNQ99877 126 aa2.03□□□□□ -2.08
CLK1-214ENST00000496205 HIST1H2BMQ99879 126 aa2.03□□□□□ -2.08
CLK1-214ENST00000496205 CCDC32Q9BV29 185 aa2.03□□□□□ -2.08
CLK1-214ENST00000496205 SMDT1Q9H4I9 107 aa2.03□□□□□ -2.08
CLK1-214ENST00000496205 EFCAB1Q9HAE3 211 aa2.03□□□□□ -2.08
CLK1-214ENST00000496205 LRTM1Q9HBL6 345 aa2.03□□□□□ -2.08
CLK1-214ENST00000496205 SS18L2Q9UHA2 77 aa2.03□□□□□ -2.08
CLK1-214ENST00000496205 SCN1AP35498 2009 aa2.03□□□□□ -2.08
CLK1-214ENST00000496205 TUBGCP6Q96RT7 1819 aa2.03□□□□□ -2.09
CLK1-214ENST00000496205 UHRF1BP1Q6BDS2 1440 aa2.02□□□□□ -2.09
CLK1-214ENST00000496205 SETD5Q9C0A6 1442 aa2.02□□□□□ -2.09
CLK1-214ENST00000496205 DSCAML1Q8TD84 2053 aa2.02□□□□□ -2.09
CLK1-214ENST00000496205 CPDO75976 1380 aa2.02□□□□□ -2.09
CLK1-214ENST00000496205 PTPRJQ12913 1337 aa2.02□□□□□ -2.09
CLK1-214ENST00000496205 CHD5Q8TDI0 1954 aa2.02□□□□□ -2.09
CLK1-214ENST00000496205 IGLV3-12A0A075B6K2 115 aa2.02□□□□□ -2.09
CLK1-214ENST00000496205 IGKV1OR2-108A0A075B7D4 117 aa2.02□□□□□ -2.09
CLK1-214ENST00000496205 A0A1W2PRE2 83 aa2.02□□□□□ -2.09
CLK1-214ENST00000496205 ZNF98A6NK75 572 aa2.02□□□□□ -2.09
CLK1-214ENST00000496205 RIIAD1A6NNX1 92 aa2.02□□□□□ -2.09
CLK1-214ENST00000496205 H3BQ85 93 aa2.02□□□□□ -2.09
CLK1-214ENST00000496205 C19orf84I3L1E1 186 aa2.02□□□□□ -2.09
CLK1-214ENST00000496205 LECT2O14960 151 aa2.02□□□□□ -2.09
CLK1-214ENST00000496205 PRM2P04554 102 aa2.02□□□□□ -2.09
CLK1-214ENST00000496205 SLC25A16P16260 332 aa2.02□□□□□ -2.09
CLK1-214ENST00000496205 CSN1S1P47710 185 aa2.02□□□□□ -2.09
CLK1-214ENST00000496205 RBM11P57052 281 aaKnown RBP2.02□□□□□ -2.09
CLK1-214ENST00000496205 FXYD7P58549 80 aa2.02□□□□□ -2.09
CLK1-214ENST00000496205 CDC42P60953 191 aa2.02□□□□□ -2.09
CLK1-214ENST00000496205 AP1S1P61966 158 aa2.02□□□□□ -2.09
CLK1-214ENST00000496205 DHRS2Q13268 280 aa2.02□□□□□ -2.09
CLK1-214ENST00000496205 LDLRAD2Q5SZI1 272 aa2.02□□□□□ -2.09
CLK1-214ENST00000496205 RASL11AQ6T310 242 aa2.02□□□□□ -2.09
CLK1-214ENST00000496205 SSX8Q7RTT4 187 aa2.02□□□□□ -2.09
CLK1-214ENST00000496205 HMGN2P46Q86SG4 172 aa2.02□□□□□ -2.09
CLK1-214ENST00000496205 ANGPTL5Q86XS5 388 aa2.02□□□□□ -2.09
CLK1-214ENST00000496205 ZNF561Q8N587 486 aa2.02□□□□□ -2.09
CLK1-214ENST00000496205 DAND5Q8N907 189 aa2.02□□□□□ -2.09
CLK1-214ENST00000496205 OR9Q1Q8NGQ5 310 aa2.02□□□□□ -2.09
CLK1-214ENST00000496205 BORCS5Q969J3 196 aa2.02□□□□□ -2.09
CLK1-214ENST00000496205 C11orf68Q9H3H3 251 aaKnown RBP2.02□□□□□ -2.09
CLK1-214ENST00000496205 MARCOQ9UEW3 520 aaPredicted RBP2.02□□□□□ -2.09
CLK1-214ENST00000496205 OR52A1Q9UKL2 312 aa2.02□□□□□ -2.09
CLK1-214ENST00000496205 DOCK5Q9H7D0 1870 aa2.02□□□□□ -2.09
CLK1-214ENST00000496205 CCDC180Q9P1Z9 1646 aa2.02□□□□□ -2.09
CLK1-214ENST00000496205 PEG3Q9GZU2 1588 aa2.02□□□□□ -2.09
CLK1-214ENST00000496205 HECW2Q9P2P5 1572 aa2.02□□□□□ -2.09
CLK1-214ENST00000496205 ABCC12Q96J65 1359 aa2.01□□□□□ -2.09
CLK1-214ENST00000496205 IGHV3OR16-8A0A075B7F1 116 aa2.01□□□□□ -2.09
CLK1-214ENST00000496205 TRAV40A0A0B4J280 105 aa2.01□□□□□ -2.09
CLK1-214ENST00000496205 IRGMA1A4Y4 181 aa2.01□□□□□ -2.09
CLK1-214ENST00000496205 EFCAB10A6NFE3 127 aa2.01□□□□□ -2.09
CLK1-214ENST00000496205 C16orf90A8MZG2 172 aa2.01□□□□□ -2.09
CLK1-214ENST00000496205 UBFD1O14562 309 aaKnown RBP2.01□□□□□ -2.09
CLK1-214ENST00000496205 NPYP01303 97 aa2.01□□□□□ -2.09
CLK1-214ENST00000496205 TFPTP0C1Z6 253 aa2.01□□□□□ -2.09
CLK1-214ENST00000496205 OR10J4P0C629 311 aa2.01□□□□□ -2.09
CLK1-214ENST00000496205 CRHBPP24387 322 aa2.01□□□□□ -2.09
CLK1-214ENST00000496205 CRYBB3P26998 211 aa2.01□□□□□ -2.09
CLK1-214ENST00000496205 S100A7P31151 101 aa2.01□□□□□ -2.09
CLK1-214ENST00000496205 TAS2R30P59541 319 aa2.01□□□□□ -2.09
CLK1-214ENST00000496205 RPL30P62888 115 aaKnown RBP2.01□□□□□ -2.09
CLK1-214ENST00000496205 FLI1Q01543 452 aaPredicted RBP2.01□□□□□ -2.09
CLK1-214ENST00000496205 RHEBQ15382 184 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms