RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 PARP11Q9NR21 331 aa17.19■□□□□ 0.34
ECHDC3-205ENST00000496136 KCNAB3O43448 404 aa17.18■□□□□ 0.34
ECHDC3-205ENST00000496136 SCGB1D2O95969 90 aa17.18■□□□□ 0.34
ECHDC3-205ENST00000496136 Q6ZSV7 163 aa17.18■□□□□ 0.34
ECHDC3-205ENST00000496136 Q8N2B8 174 aa17.18■□□□□ 0.34
ECHDC3-205ENST00000496136 SGMS2Q8NHU3 365 aa17.18■□□□□ 0.34
ECHDC3-205ENST00000496136 ABHD5Q8WTS1 349 aa17.18■□□□□ 0.34
ECHDC3-205ENST00000496136 TEX22C9J3V5 150 aa17.17■□□□□ 0.34
ECHDC3-205ENST00000496136 TSPAN9O75954 239 aa17.17■□□□□ 0.34
ECHDC3-205ENST00000496136 APELAP0DMC3 54 aa17.17■□□□□ 0.34
ECHDC3-205ENST00000496136 POLR2GP62487 172 aaKnown RBP eCLIP17.17■□□□□ 0.34
ECHDC3-205ENST00000496136 CD83Q01151 205 aa17.17■□□□□ 0.34
ECHDC3-205ENST00000496136 LFNGQ8NES3 379 aa17.17■□□□□ 0.34
ECHDC3-205ENST00000496136 RBKSQ9H477 322 aa17.17■□□□□ 0.34
ECHDC3-205ENST00000496136 IGF1P05019 195 aa17.17■□□□□ 0.34
ECHDC3-205ENST00000496136 GIPP09681 153 aaPredicted RBP17.17■□□□□ 0.34
ECHDC3-205ENST00000496136 RAB32Q13637 225 aa17.17■□□□□ 0.34
ECHDC3-205ENST00000496136 PPP1R1CQ8WVI7 109 aa17.17■□□□□ 0.34
ECHDC3-205ENST00000496136 LINC00527Q9UJ94 153 aa17.17■□□□□ 0.34
ECHDC3-205ENST00000496136 CEBPZOSA8MTT3 80 aa17.16■□□□□ 0.34
ECHDC3-205ENST00000496136 SYNGR2O43760 224 aa17.16■□□□□ 0.34
ECHDC3-205ENST00000496136 IGLC7A0M8Q6 106 aa17.15■□□□□ 0.34
ECHDC3-205ENST00000496136 MED6O75586 246 aa17.15■□□□□ 0.34
ECHDC3-205ENST00000496136 WT1-ASQ06250 92 aa17.15■□□□□ 0.34
ECHDC3-205ENST00000496136 TMEM95Q3KNT9 176 aa17.15■□□□□ 0.34
ECHDC3-205ENST00000496136 LRRC37A5PQ49AS3 106 aa17.15■□□□□ 0.34
ECHDC3-205ENST00000496136 ASPHD1Q5U4P2 390 aa17.15■□□□□ 0.34
ECHDC3-205ENST00000496136 ASB13Q8WXK3 278 aa17.15■□□□□ 0.34
ECHDC3-205ENST00000496136 NOL4LQ96MY1 436 aaPredicted RBP17.15■□□□□ 0.34
ECHDC3-205ENST00000496136 PLEKHA3Q9HB20 300 aa17.15■□□□□ 0.34
ECHDC3-205ENST00000496136 WSB1Q9Y6I7 421 aa17.15■□□□□ 0.34
ECHDC3-205ENST00000496136 G3V318 75 aa17.15■□□□□ 0.34
ECHDC3-205ENST00000496136 K7EPK0 472 aa17.15■□□□□ 0.34
ECHDC3-205ENST00000496136 AP4M1O00189 453 aa17.15■□□□□ 0.34
ECHDC3-205ENST00000496136 AREGP15514 252 aa17.15■□□□□ 0.34
ECHDC3-205ENST00000496136 VDAC2P45880 294 aaPredicted RBP17.15■□□□□ 0.34
ECHDC3-205ENST00000496136 CRIP2P52943 208 aaPredicted RBP17.15■□□□□ 0.34
ECHDC3-205ENST00000496136 RAP2BP61225 183 aa17.15■□□□□ 0.34
ECHDC3-205ENST00000496136 AKIRIN2Q53H80 203 aa17.15■□□□□ 0.34
ECHDC3-205ENST00000496136 DTD1Q8TEA8 209 aa17.15■□□□□ 0.34
ECHDC3-205ENST00000496136 SRSF8Q9BRL6 282 aaKnown RBP17.15■□□□□ 0.34
ECHDC3-205ENST00000496136 RANGRFQ9HD47 186 aaPredicted RBP17.15■□□□□ 0.34
ECHDC3-205ENST00000496136 RCL1Q9Y2P8 373 aaKnown RBP17.15■□□□□ 0.34
ECHDC3-205ENST00000496136 LSM5Q9Y4Y9 91 aaKnown RBP17.15■□□□□ 0.34
ECHDC3-205ENST00000496136 A0A1W2PN81 502 aa17.14■□□□□ 0.33
ECHDC3-205ENST00000496136 OR13C7P0DN81 318 aa17.14■□□□□ 0.33
ECHDC3-205ENST00000496136 PSMB6P28072 239 aa17.14■□□□□ 0.33
ECHDC3-205ENST00000496136 CHRNA7P36544 502 aa17.14■□□□□ 0.33
ECHDC3-205ENST00000496136 ARSJQ5FYB0 599 aaPredicted RBP17.14■□□□□ 0.33
ECHDC3-205ENST00000496136 C11orf87Q6NUJ2 197 aa17.14■□□□□ 0.33
ECHDC3-205ENST00000496136 INS-IGF2F8WCM5 200 aa17.13■□□□□ 0.33
ECHDC3-205ENST00000496136 WRBO00258 174 aa17.13■□□□□ 0.33
ECHDC3-205ENST00000496136 HOXA1P49639 335 aaPredicted RBP17.13■□□□□ 0.33
ECHDC3-205ENST00000496136 S100A10P60903 97 aa17.13■□□□□ 0.33
ECHDC3-205ENST00000496136 TMEM267Q0VDI3 215 aaPredicted RBP17.13■□□□□ 0.33
ECHDC3-205ENST00000496136 UNQ5815/PRO19632Q6UWF5 114 aa17.13■□□□□ 0.33
ECHDC3-205ENST00000496136 OR2T6Q8NHC8 308 aa17.13■□□□□ 0.33
ECHDC3-205ENST00000496136 ST6GAL2Q96JF0 529 aa17.13■□□□□ 0.33
ECHDC3-205ENST00000496136 ENY2Q9NPA8 101 aa17.13■□□□□ 0.33
ECHDC3-205ENST00000496136 HEYLQ9NQ87 328 aaPredicted RBP17.13■□□□□ 0.33
ECHDC3-205ENST00000496136 ZFP57Q9NU63 452 aa17.13■□□□□ 0.33
ECHDC3-205ENST00000496136 SERTAD4Q9NUC0 356 aa17.13■□□□□ 0.33
ECHDC3-205ENST00000496136 TRAV41A0A0B4J266 112 aa17.12■□□□□ 0.33
ECHDC3-205ENST00000496136 SSSCA1O60232 199 aa17.12■□□□□ 0.33
ECHDC3-205ENST00000496136 CCNKO75909 580 aa17.12■□□□□ 0.33
ECHDC3-205ENST00000496136 MPC2O95563 127 aa17.12■□□□□ 0.33
ECHDC3-205ENST00000496136 IAPPP10997 89 aa17.12■□□□□ 0.33
ECHDC3-205ENST00000496136 ECSCRQ19T08 205 aa17.12■□□□□ 0.33
ECHDC3-205ENST00000496136 C19orf54Q5BKX5 351 aa17.12■□□□□ 0.33
ECHDC3-205ENST00000496136 Q5BKY6 102 aa17.12■□□□□ 0.33
ECHDC3-205ENST00000496136 HSD17B13Q7Z5P4 300 aaPredicted RBP17.12■□□□□ 0.33
ECHDC3-205ENST00000496136 STPG2Q8N412 459 aa17.12■□□□□ 0.33
ECHDC3-205ENST00000496136 TMEM68Q96MH6 324 aa17.12■□□□□ 0.33
ECHDC3-205ENST00000496136 HIPK2Q9H2X6 1198 aa17.12■□□□□ 0.33
ECHDC3-205ENST00000496136 ZNF580Q9UK33 172 aa17.12■□□□□ 0.33
ECHDC3-205ENST00000496136 H0YIZ8 118 aa17.12■□□□□ 0.33
ECHDC3-205ENST00000496136 TMEM50AO95807 157 aa17.12■□□□□ 0.33
ECHDC3-205ENST00000496136 REG1AP05451 166 aa17.12■□□□□ 0.33
ECHDC3-205ENST00000496136 ERHP84090 104 aaKnown RBP17.12■□□□□ 0.33
ECHDC3-205ENST00000496136 OR2C3Q8N628 320 aa17.12■□□□□ 0.33
ECHDC3-205ENST00000496136 OR2T35Q8NGX2 323 aa17.12■□□□□ 0.33
ECHDC3-205ENST00000496136 C16orf95Q9H693 158 aa17.12■□□□□ 0.33
ECHDC3-205ENST00000496136 NDUFA7O95182 113 aa17.11■□□□□ 0.33
ECHDC3-205ENST00000496136 PAX9P55771 341 aa17.11■□□□□ 0.33
ECHDC3-205ENST00000496136 PRIMA1Q86XR5 153 aa17.11■□□□□ 0.33
ECHDC3-205ENST00000496136 TTC9CQ8N5M4 171 aa17.11■□□□□ 0.33
ECHDC3-205ENST00000496136 OR5T1Q8NG75 326 aa17.11■□□□□ 0.33
ECHDC3-205ENST00000496136 RAB40CQ96S21 281 aa17.11■□□□□ 0.33
ECHDC3-205ENST00000496136 RNF126Q9BV68 326 aa17.11■□□□□ 0.33
ECHDC3-205ENST00000496136 DEDDO75618 318 aa17.1■□□□□ 0.33
ECHDC3-205ENST00000496136 AKAP14Q86UN6 197 aa17.1■□□□□ 0.33
ECHDC3-205ENST00000496136 MRPL41Q8IXM3 137 aaKnown RBP17.1■□□□□ 0.33
ECHDC3-205ENST00000496136 LINC01006Q8NI28 216 aa17.1■□□□□ 0.33
ECHDC3-205ENST00000496136 CIB3Q96Q77 187 aaPredicted RBP17.1■□□□□ 0.33
ECHDC3-205ENST00000496136 C11orf1Q9H5F2 150 aa17.1■□□□□ 0.33
ECHDC3-205ENST00000496136 RLN2P04090 185 aa17.1■□□□□ 0.33
ECHDC3-205ENST00000496136 CRYGCP07315 174 aa17.1■□□□□ 0.33
ECHDC3-205ENST00000496136 CTRB1P17538 263 aa17.1■□□□□ 0.33
ECHDC3-205ENST00000496136 PPIFP30405 207 aaKnown RBP17.1■□□□□ 0.33
ECHDC3-205ENST00000496136 KRTAP21-3Q3LHN1 58 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms