RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 V9GY05 133 aa9.75□□□□□ -0.85
COL1A1-209ENST00000495677 IGHV7-4-1A0A0J9YVY3 117 aa9.74□□□□□ -0.85
COL1A1-209ENST00000495677 F8W735 103 aaPredicted RBP9.74□□□□□ -0.85
COL1A1-209ENST00000495677 J3QRK9 145 aa9.74□□□□□ -0.85
COL1A1-209ENST00000495677 DFFBO76075 338 aa9.74□□□□□ -0.85
COL1A1-209ENST00000495677 AMBPP02760 352 aa9.74□□□□□ -0.85
COL1A1-209ENST00000495677 SERPINE2P07093 398 aa9.74□□□□□ -0.85
COL1A1-209ENST00000495677 NFYAP23511 347 aaPredicted RBP9.74□□□□□ -0.85
COL1A1-209ENST00000495677 TALDO1P37837 337 aa9.74□□□□□ -0.85
COL1A1-209ENST00000495677 PLA2G7Q13093 441 aa9.74□□□□□ -0.85
COL1A1-209ENST00000495677 ARL6IP1Q15041 203 aa9.74□□□□□ -0.85
COL1A1-209ENST00000495677 TRAM1Q15629 374 aa9.74□□□□□ -0.85
COL1A1-209ENST00000495677 LIPKQ5VXJ0 399 aa9.74□□□□□ -0.85
COL1A1-209ENST00000495677 Q6ZTC4 211 aa9.74□□□□□ -0.85
COL1A1-209ENST00000495677 DHRSXQ8N5I4 330 aa9.74□□□□□ -0.85
COL1A1-209ENST00000495677 GDPD1Q8N9F7 314 aa9.74□□□□□ -0.85
COL1A1-209ENST00000495677 C20orf24Q9BUV8 137 aa9.74□□□□□ -0.85
COL1A1-209ENST00000495677 RHPN1-AS1Q9BWJ2 59 aa9.74□□□□□ -0.85
COL1A1-209ENST00000495677 C8orf4Q9NR00 106 aa9.74□□□□□ -0.85
COL1A1-209ENST00000495677 SPATA2Q9UM82 520 aa9.74□□□□□ -0.85
COL1A1-209ENST00000495677 LSM2Q9Y333 95 aaKnown RBP9.74□□□□□ -0.85
COL1A1-209ENST00000495677 HSPG2P98160 4391 aa9.73□□□□□ -0.85
COL1A1-209ENST00000495677 NACAE9PAV3 2078 aa9.73□□□□□ -0.85
COL1A1-209ENST00000495677 IGKV1D-13A0A0B4J2D9 117 aa9.73□□□□□ -0.85
COL1A1-209ENST00000495677 ZNF705EA8MWA4 302 aaPredicted RBP9.73□□□□□ -0.85
COL1A1-209ENST00000495677 UPK2O00526 184 aa9.73□□□□□ -0.85
COL1A1-209ENST00000495677 RBFOX2O43251 390 aaKnown RBP eCLIP9.73□□□□□ -0.85
COL1A1-209ENST00000495677 IGKV1-13P0DP09 117 aa9.73□□□□□ -0.85
COL1A1-209ENST00000495677 RAB6AP20340 208 aa9.73□□□□□ -0.85
COL1A1-209ENST00000495677 PAFAH1B2P68402 229 aa9.73□□□□□ -0.85
COL1A1-209ENST00000495677 MSMO1Q15800 293 aa9.73□□□□□ -0.85
COL1A1-209ENST00000495677 TMEM116Q8NCL8 245 aa9.73□□□□□ -0.85
COL1A1-209ENST00000495677 SCARB1Q8WTV0 552 aa9.73□□□□□ -0.85
COL1A1-209ENST00000495677 ZNF414Q96IQ9 312 aa9.73□□□□□ -0.85
COL1A1-209ENST00000495677 CMTM3Q96MX0 182 aa9.73□□□□□ -0.85
COL1A1-209ENST00000495677 COMMD5Q9GZQ3 224 aa9.73□□□□□ -0.85
COL1A1-209ENST00000495677 DCSTAMPQ9H295 470 aa9.73□□□□□ -0.85
COL1A1-209ENST00000495677 C21orf62Q9NYP8 219 aa9.73□□□□□ -0.85
COL1A1-209ENST00000495677 METTL21EPA6NDL7 271 aa9.72□□□□□ -0.85
COL1A1-209ENST00000495677 CDK2AP2O75956 126 aa9.72□□□□□ -0.85
COL1A1-209ENST00000495677 CTSGP08311 255 aa9.72□□□□□ -0.85
COL1A1-209ENST00000495677 TAS2R31P59538 309 aa9.72□□□□□ -0.85
COL1A1-209ENST00000495677 SLC25A24Q6NUK1 477 aa9.72□□□□□ -0.85
COL1A1-209ENST00000495677 CNIH2Q6PI25 160 aa9.72□□□□□ -0.85
COL1A1-209ENST00000495677 Q6ZR54 194 aa9.72□□□□□ -0.85
COL1A1-209ENST00000495677 C8orf59Q8N0T1 100 aaPredicted RBP9.72□□□□□ -0.85
COL1A1-209ENST00000495677 CENPSQ8N2Z9 138 aa9.72□□□□□ -0.85
COL1A1-209ENST00000495677 BPIFB6Q8NFQ5 453 aa9.72□□□□□ -0.85
COL1A1-209ENST00000495677 DGCR14Q96DF8 476 aaKnown RBP9.72□□□□□ -0.85
COL1A1-209ENST00000495677 QTRT1Q9BXR0 403 aaKnown RBP9.72□□□□□ -0.85
COL1A1-209ENST00000495677 HRASLSQ9HDD0 168 aa9.72□□□□□ -0.85
COL1A1-209ENST00000495677 TRAV2A0A0B4J234 112 aa9.71□□□□□ -0.86
COL1A1-209ENST00000495677 IGHV4-28A0A0C4DH34 117 aa9.71□□□□□ -0.86
COL1A1-209ENST00000495677 M0R2N4 97 aa9.71□□□□□ -0.86
COL1A1-209ENST00000495677 ZNF207O43670 478 aaKnown RBP9.71□□□□□ -0.86
COL1A1-209ENST00000495677 HPRT1P00492 218 aa9.71□□□□□ -0.86
COL1A1-209ENST00000495677 GIG44P09565 113 aaPredicted RBP9.71□□□□□ -0.86
COL1A1-209ENST00000495677 NQO2P16083 231 aa9.71□□□□□ -0.86
COL1A1-209ENST00000495677 PSMA1P25786 263 aaKnown RBP9.71□□□□□ -0.86
COL1A1-209ENST00000495677 RELQ04864 619 aaPredicted RBP9.71□□□□□ -0.86
COL1A1-209ENST00000495677 ZNF575Q86XF7 245 aa9.71□□□□□ -0.86
COL1A1-209ENST00000495677 PACRGLQ8N7B6 248 aa9.71□□□□□ -0.86
COL1A1-209ENST00000495677 ZBTB34Q8NCN2 500 aa9.71□□□□□ -0.86
COL1A1-209ENST00000495677 OR10W1Q8NGF6 305 aa9.71□□□□□ -0.86
COL1A1-209ENST00000495677 UFD1Q92890 307 aa9.71□□□□□ -0.86
COL1A1-209ENST00000495677 TMEM203Q969S6 136 aa9.71□□□□□ -0.86
COL1A1-209ENST00000495677 TAS2R8Q9NYW2 309 aa9.71□□□□□ -0.86
COL1A1-209ENST00000495677 F11RQ9Y624 299 aaKnown RBP9.71□□□□□ -0.86
COL1A1-209ENST00000495677 A0A075B6Q4 140 aa9.7□□□□□ -0.86
COL1A1-209ENST00000495677 IGHV3OR16-8A0A075B7F1 116 aa9.7□□□□□ -0.86
COL1A1-209ENST00000495677 ELOA3CA0A087WX78 387 aaPredicted RBP9.7□□□□□ -0.86
COL1A1-209ENST00000495677 TRAV14DV4A0A0A6YYC5 116 aa9.7□□□□□ -0.86
COL1A1-209ENST00000495677 TRAV3A0A0B4J244 114 aa9.7□□□□□ -0.86
COL1A1-209ENST00000495677 K7EIM0 57 aa9.7□□□□□ -0.86
COL1A1-209ENST00000495677 TRAPPC2P0DI81 140 aa9.7□□□□□ -0.86
COL1A1-209ENST00000495677 TRAPPC2BP0DI82 140 aa9.7□□□□□ -0.86
COL1A1-209ENST00000495677 OR13C7P0DN81 318 aa9.7□□□□□ -0.86
COL1A1-209ENST00000495677 TFPI2P48307 235 aa9.7□□□□□ -0.86
COL1A1-209ENST00000495677 WT1-ASQ06250 92 aa9.7□□□□□ -0.86
COL1A1-209ENST00000495677 HES5Q5TA89 166 aa9.7□□□□□ -0.86
COL1A1-209ENST00000495677 SPAG16Q8N0X2 631 aa9.7□□□□□ -0.86
COL1A1-209ENST00000495677 CADM3Q8N126 398 aa9.7□□□□□ -0.86
COL1A1-209ENST00000495677 NDUFAF3Q9BU61 184 aa9.7□□□□□ -0.86
COL1A1-209ENST00000495677 X6R8D5 127 aa9.7□□□□□ -0.86
COL1A1-209ENST00000495677 DEFB131BA0A096LNP1 70 aa9.69□□□□□ -0.86
COL1A1-209ENST00000495677 TEX50A0A1B0GTY4 177 aa9.69□□□□□ -0.86
COL1A1-209ENST00000495677 GNAO1P09471 354 aa9.69□□□□□ -0.86
COL1A1-209ENST00000495677 SPP1P10451 314 aa9.69□□□□□ -0.86
COL1A1-209ENST00000495677 CALRP27797 417 aaKnown RBP9.69□□□□□ -0.86
COL1A1-209ENST00000495677 HACD4Q5VWC8 232 aa9.69□□□□□ -0.86
COL1A1-209ENST00000495677 MORN3Q6PF18 240 aaPredicted RBP9.69□□□□□ -0.86
COL1A1-209ENST00000495677 STHQ8IWL8 128 aa9.69□□□□□ -0.86
COL1A1-209ENST00000495677 OR1L8Q8NGR8 309 aa9.69□□□□□ -0.86
COL1A1-209ENST00000495677 GIMAP1Q8WWP7 306 aa9.69□□□□□ -0.86
COL1A1-209ENST00000495677 TXN2Q99757 166 aa9.69□□□□□ -0.86
COL1A1-209ENST00000495677 VSIRQ9H7M9 311 aa9.69□□□□□ -0.86
COL1A1-209ENST00000495677 PLEKHA2Q9HB19 425 aa9.69□□□□□ -0.86
COL1A1-209ENST00000495677 NDUFA4L2Q9NRX3 87 aa9.69□□□□□ -0.86
COL1A1-209ENST00000495677 ELF5Q9UKW6 265 aaPredicted RBP9.69□□□□□ -0.86
COL1A1-209ENST00000495677 IGKV3-7A0A075B6H7 116 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms