RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 DBX1A6NMT0 343 aa7.34□□□□□ -1.23
UFD1-210ENST00000494054 MARCH11A6NNE9 402 aa7.34□□□□□ -1.23
UFD1-210ENST00000494054 GPR31O00270 319 aa7.34□□□□□ -1.23
UFD1-210ENST00000494054 FGF2P09038 288 aa7.34□□□□□ -1.23
UFD1-210ENST00000494054 TRAPPC2P0DI81 140 aa7.34□□□□□ -1.23
UFD1-210ENST00000494054 TRAPPC2BP0DI82 140 aa7.34□□□□□ -1.23
UFD1-210ENST00000494054 OR13C7P0DN81 318 aa7.34□□□□□ -1.23
UFD1-210ENST00000494054 PTBP1P26599 531 aaKnown RBP eCLIP7.34□□□□□ -1.23
UFD1-210ENST00000494054 GPR183P32249 361 aa7.34□□□□□ -1.23
UFD1-210ENST00000494054 G6PCP35575 357 aa7.34□□□□□ -1.23
UFD1-210ENST00000494054 GUCA2BQ16661 112 aa7.34□□□□□ -1.23
UFD1-210ENST00000494054 FAM106AQ4KMX7 169 aa7.34□□□□□ -1.23
UFD1-210ENST00000494054 PHLDA2Q53GA4 152 aa7.34□□□□□ -1.23
UFD1-210ENST00000494054 TM4SF20Q53R12 229 aa7.34□□□□□ -1.23
UFD1-210ENST00000494054 UNQ9165/PRO28630Q6UXU0 137 aa7.34□□□□□ -1.23
UFD1-210ENST00000494054 LAX1Q8IWV1 398 aa7.34□□□□□ -1.23
UFD1-210ENST00000494054 UXS1Q8NBZ7 420 aa7.34□□□□□ -1.23
UFD1-210ENST00000494054 CXorf58Q96LI9 332 aa7.34□□□□□ -1.23
UFD1-210ENST00000494054 CMTM3Q96MX0 182 aa7.34□□□□□ -1.23
UFD1-210ENST00000494054 SPATA25Q9BR10 227 aa7.34□□□□□ -1.23
UFD1-210ENST00000494054 SCPEP1Q9HB40 452 aa7.34□□□□□ -1.23
UFD1-210ENST00000494054 NDUFA4L2Q9NRX3 87 aa7.34□□□□□ -1.23
UFD1-210ENST00000494054 TECRQ9NZ01 308 aaKnown RBP7.34□□□□□ -1.23
UFD1-210ENST00000494054 MLXQ9UH92 298 aa7.34□□□□□ -1.23
UFD1-210ENST00000494054 STARD9Q9P2P6 4700 aa7.33□□□□□ -1.24
UFD1-210ENST00000494054 IGHV3-21A0A0B4J1V1 117 aa7.33□□□□□ -1.24
UFD1-210ENST00000494054 IGHV3-35A0A0C4DH35 117 aa7.33□□□□□ -1.24
UFD1-210ENST00000494054 SMIM31A0A1B0GVY4 71 aa7.33□□□□□ -1.24
UFD1-210ENST00000494054 RBMY1BA6NDE4 496 aaKnown RBP7.33□□□□□ -1.24
UFD1-210ENST00000494054 RBMY1EA6NEQ0 496 aaKnown RBP7.33□□□□□ -1.24
UFD1-210ENST00000494054 A8MWP6 167 aa7.33□□□□□ -1.24
UFD1-210ENST00000494054 TPPPO94811 219 aa7.33□□□□□ -1.24
UFD1-210ENST00000494054 SERPINE2P07093 398 aa7.33□□□□□ -1.24
UFD1-210ENST00000494054 RBMY1DP0C7P1 496 aaKnown RBP7.33□□□□□ -1.24
UFD1-210ENST00000494054 SMIM18P0DKX4 95 aa7.33□□□□□ -1.24
UFD1-210ENST00000494054 LYL1P12980 280 aa7.33□□□□□ -1.24
UFD1-210ENST00000494054 ERVK-16P61578 105 aa7.33□□□□□ -1.24
UFD1-210ENST00000494054 ZFAND6Q6FIF0 208 aa7.33□□□□□ -1.24
UFD1-210ENST00000494054 SLC25A24Q6NUK1 477 aa7.33□□□□□ -1.24
UFD1-210ENST00000494054 CMTM1Q8IZ96 169 aa7.33□□□□□ -1.24
UFD1-210ENST00000494054 TMEM61Q8N0U2 210 aa7.33□□□□□ -1.24
UFD1-210ENST00000494054 CADM3Q8N126 398 aa7.33□□□□□ -1.24
UFD1-210ENST00000494054 GDPD1Q8N9F7 314 aa7.33□□□□□ -1.24
UFD1-210ENST00000494054 OR1L8Q8NGR8 309 aa7.33□□□□□ -1.24
UFD1-210ENST00000494054 HINT2Q9BX68 163 aa7.33□□□□□ -1.24
UFD1-210ENST00000494054 RETNQ9HD89 108 aa7.33□□□□□ -1.24
UFD1-210ENST00000494054 GAR1Q9NY12 217 aaKnown RBP7.33□□□□□ -1.24
UFD1-210ENST00000494054 SLC2A8Q9NY64 477 aa7.33□□□□□ -1.24
UFD1-210ENST00000494054 OR51B2Q9Y5P1 312 aa7.33□□□□□ -1.24
UFD1-210ENST00000494054 TENM2Q9NT68 2774 aa7.33□□□□□ -1.24
UFD1-210ENST00000494054 OR11H12B2RN74 326 aa7.32□□□□□ -1.24
UFD1-210ENST00000494054 M0QYG6 137 aa7.32□□□□□ -1.24
UFD1-210ENST00000494054 IGKV1-39P01597 117 aa7.32□□□□□ -1.24
UFD1-210ENST00000494054 IGKV1D-39P04432 117 aa7.32□□□□□ -1.24
UFD1-210ENST00000494054 C8orf88P0DMB2 117 aa7.32□□□□□ -1.24
UFD1-210ENST00000494054 RCVRNP35243 200 aa7.32□□□□□ -1.24
UFD1-210ENST00000494054 RORCP51449 518 aa7.32□□□□□ -1.24
UFD1-210ENST00000494054 TSPAN5P62079 268 aa7.32□□□□□ -1.24
UFD1-210ENST00000494054 CTF1Q16619 201 aa7.32□□□□□ -1.24
UFD1-210ENST00000494054 RNASE12Q5GAN4 147 aaKnown RBP7.32□□□□□ -1.24
UFD1-210ENST00000494054 ZNF57Q68EA5 555 aaPredicted RBP7.32□□□□□ -1.24
UFD1-210ENST00000494054 THOC7Q6I9Y2 204 aaKnown RBP7.32□□□□□ -1.24
UFD1-210ENST00000494054 PLET1Q6UQ28 207 aa7.32□□□□□ -1.24
UFD1-210ENST00000494054 TBC1D26Q86UD7 250 aa7.32□□□□□ -1.24
UFD1-210ENST00000494054 VN1R17PQ8TDU5 208 aa7.32□□□□□ -1.24
UFD1-210ENST00000494054 LSM10Q969L4 123 aaKnown RBP7.32□□□□□ -1.24
UFD1-210ENST00000494054 CHRDL1Q9BU40 450 aa7.32□□□□□ -1.24
UFD1-210ENST00000494054 HIPK2Q9H2X6 1198 aa7.32□□□□□ -1.24
UFD1-210ENST00000494054 THYN1Q9P016 225 aa7.32□□□□□ -1.24
UFD1-210ENST00000494054 F11RQ9Y624 299 aaKnown RBP7.32□□□□□ -1.24
UFD1-210ENST00000494054 CEPT1Q9Y6K0 416 aa7.32□□□□□ -1.24
UFD1-210ENST00000494054 CSMD3Q7Z407 3707 aa7.31□□□□□ -1.24
UFD1-210ENST00000494054 OR2T8A6NH00 312 aa7.31□□□□□ -1.24
UFD1-210ENST00000494054 FAM25AB3EWG3 89 aa7.31□□□□□ -1.24
UFD1-210ENST00000494054 FAM25CB3EWG5 89 aa7.31□□□□□ -1.24
UFD1-210ENST00000494054 FAM25GB3EWG6 89 aa7.31□□□□□ -1.24
UFD1-210ENST00000494054 F8W735 103 aaPredicted RBP7.31□□□□□ -1.24
UFD1-210ENST00000494054 K7EIM0 57 aa7.31□□□□□ -1.24
UFD1-210ENST00000494054 TGOLN2O43493 480 aa7.31□□□□□ -1.24
UFD1-210ENST00000494054 SNAPC5O75971 98 aa7.31□□□□□ -1.24
UFD1-210ENST00000494054 SCAF4O95104 1147 aaKnown RBP7.31□□□□□ -1.24
UFD1-210ENST00000494054 GABARAPO95166 117 aa7.31□□□□□ -1.24
UFD1-210ENST00000494054 UCP3P55916 312 aa7.31□□□□□ -1.24
UFD1-210ENST00000494054 LPCAT3Q6P1A2 487 aa7.31□□□□□ -1.24
UFD1-210ENST00000494054 BTNL8Q6UX41 500 aa7.31□□□□□ -1.24
UFD1-210ENST00000494054 HSD17B13Q7Z5P4 300 aaPredicted RBP7.31□□□□□ -1.24
UFD1-210ENST00000494054 OR52I2Q8NH67 350 aa7.31□□□□□ -1.24
UFD1-210ENST00000494054 SCARB1Q8WTV0 552 aa7.31□□□□□ -1.24
UFD1-210ENST00000494054 ISOC1Q96CN7 298 aa7.31□□□□□ -1.24
UFD1-210ENST00000494054 ZNF414Q96IQ9 312 aa7.31□□□□□ -1.24
UFD1-210ENST00000494054 SEC22AQ96IW7 307 aa7.31□□□□□ -1.24
UFD1-210ENST00000494054 FAM110AQ9BQ89 295 aa7.31□□□□□ -1.24
UFD1-210ENST00000494054 ZNF436Q9C0F3 470 aaPredicted RBP7.31□□□□□ -1.24
UFD1-210ENST00000494054 SRD5A3Q9H8P0 318 aa7.31□□□□□ -1.24
UFD1-210ENST00000494054 PALMDQ9NP74 551 aa7.31□□□□□ -1.24
UFD1-210ENST00000494054 KLK11Q9UBX7 282 aa7.31□□□□□ -1.24
UFD1-210ENST00000494054 PRNDQ9UKY0 176 aa7.31□□□□□ -1.24
UFD1-210ENST00000494054 C15orf61A6NNL5 157 aa7.3□□□□□ -1.24
UFD1-210ENST00000494054 IFNA6P05013 189 aa7.3□□□□□ -1.24
UFD1-210ENST00000494054 ZNF182P17025 639 aaPredicted RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms