RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 PLP2Q04941 152 aa8.74□□□□□ -1.01
PDLIM1-205ENST00000493949 AARDQ4LEZ3 155 aa8.74□□□□□ -1.01
PDLIM1-205ENST00000493949 TRAT1Q6PIZ9 186 aa8.74□□□□□ -1.01
PDLIM1-205ENST00000493949 ZNF497Q6ZNH5 498 aa8.74□□□□□ -1.01
PDLIM1-205ENST00000493949 TMEM144Q7Z5S9 345 aa8.74□□□□□ -1.01
PDLIM1-205ENST00000493949 ZNF664Q8N3J9 261 aa8.74□□□□□ -1.01
PDLIM1-205ENST00000493949 OR51H1Q8NH63 302 aa8.74□□□□□ -1.01
PDLIM1-205ENST00000493949 OR5P3Q8WZ94 311 aa8.74□□□□□ -1.01
PDLIM1-205ENST00000493949 ALKBH3Q96Q83 286 aaPredicted RBP8.74□□□□□ -1.01
PDLIM1-205ENST00000493949 C20orf144Q9BQM9 153 aa8.74□□□□□ -1.01
PDLIM1-205ENST00000493949 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.74□□□□□ -1.01
PDLIM1-205ENST00000493949 MTCH1Q9NZJ7 389 aa8.74□□□□□ -1.01
PDLIM1-205ENST00000493949 ZNF581Q9P0T4 197 aa8.74□□□□□ -1.01
PDLIM1-205ENST00000493949 A0A0G2JRQ6 117 aa8.73□□□□□ -1.01
PDLIM1-205ENST00000493949 RAB29O14966 203 aa8.73□□□□□ -1.01
PDLIM1-205ENST00000493949 MMP23AO75900 390 aa8.73□□□□□ -1.01
PDLIM1-205ENST00000493949 IGKV1-5P01602 117 aa8.73□□□□□ -1.01
PDLIM1-205ENST00000493949 P0C879 139 aa8.73□□□□□ -1.01
PDLIM1-205ENST00000493949 RD3LP0DJH9 198 aa8.73□□□□□ -1.01
PDLIM1-205ENST00000493949 SELLP14151 372 aa8.73□□□□□ -1.01
PDLIM1-205ENST00000493949 MDKP21741 143 aaPredicted RBP8.73□□□□□ -1.01
PDLIM1-205ENST00000493949 YPEL3P61236 119 aaPredicted RBP8.73□□□□□ -1.01
PDLIM1-205ENST00000493949 SELENOTP62341 195 aa8.73□□□□□ -1.01
PDLIM1-205ENST00000493949 PAX5Q02548 391 aa8.73□□□□□ -1.01
PDLIM1-205ENST00000493949 USF2Q15853 346 aaPredicted RBP8.73□□□□□ -1.01
PDLIM1-205ENST00000493949 GABRA6Q16445 453 aa8.73□□□□□ -1.01
PDLIM1-205ENST00000493949 PDZD11Q5EBL8 140 aa8.73□□□□□ -1.01
PDLIM1-205ENST00000493949 CDPF1Q6NVV7 123 aa8.73□□□□□ -1.01
PDLIM1-205ENST00000493949 HAPLN4Q86UW8 402 aa8.73□□□□□ -1.01
PDLIM1-205ENST00000493949 RPP25LQ8N5L8 163 aaKnown RBP8.73□□□□□ -1.01
PDLIM1-205ENST00000493949 ZNF645Q8N7E2 425 aa8.73□□□□□ -1.01
PDLIM1-205ENST00000493949 LINC01356Q8N9X3 169 aa8.73□□□□□ -1.01
PDLIM1-205ENST00000493949 OR10P1Q8NGE3 313 aa8.73□□□□□ -1.01
PDLIM1-205ENST00000493949 OR10G9Q8NGN4 311 aa8.73□□□□□ -1.01
PDLIM1-205ENST00000493949 OR10G7Q8NGN6 311 aa8.73□□□□□ -1.01
PDLIM1-205ENST00000493949 ABHD3Q8WU67 409 aa8.73□□□□□ -1.01
PDLIM1-205ENST00000493949 ZNF837Q96EG3 531 aaPredicted RBP8.73□□□□□ -1.01
PDLIM1-205ENST00000493949 JMJD8Q96S16 334 aa8.73□□□□□ -1.01
PDLIM1-205ENST00000493949 RTL8AQ9BWD3 113 aa8.73□□□□□ -1.01
PDLIM1-205ENST00000493949 GP6Q9HCN6 339 aa8.73□□□□□ -1.01
PDLIM1-205ENST00000493949 UBE2L5PA0A1B0GUS4 154 aa8.72□□□□□ -1.01
PDLIM1-205ENST00000493949 MRPL33O75394 65 aaKnown RBP8.72□□□□□ -1.01
PDLIM1-205ENST00000493949 LYZL6O75951 148 aa8.72□□□□□ -1.01
PDLIM1-205ENST00000493949 ZNF205O95201 554 aa8.72□□□□□ -1.01
PDLIM1-205ENST00000493949 IGKV1-39P01597 117 aa8.72□□□□□ -1.01
PDLIM1-205ENST00000493949 IGKV1D-39P04432 117 aa8.72□□□□□ -1.01
PDLIM1-205ENST00000493949 LINC00614P0C842 121 aa8.72□□□□□ -1.01
PDLIM1-205ENST00000493949 CD1BP29016 333 aa8.72□□□□□ -1.01
PDLIM1-205ENST00000493949 FABP6P51161 128 aa8.72□□□□□ -1.01
PDLIM1-205ENST00000493949 GPM6AP51674 278 aa8.72□□□□□ -1.01
PDLIM1-205ENST00000493949 FBLN7Q53RD9 439 aa8.72□□□□□ -1.01
PDLIM1-205ENST00000493949 C4orf48Q5BLP8 95 aa8.72□□□□□ -1.01
PDLIM1-205ENST00000493949 DMRTC1Q5HYR2 192 aa8.72□□□□□ -1.01
PDLIM1-205ENST00000493949 BHLHA15Q7RTS1 189 aaPredicted RBP8.72□□□□□ -1.01
PDLIM1-205ENST00000493949 TUSC5Q8IXB3 177 aa8.72□□□□□ -1.01
PDLIM1-205ENST00000493949 MRPL41Q8IXM3 137 aaKnown RBP8.72□□□□□ -1.01
PDLIM1-205ENST00000493949 MISP3Q96FF7 219 aa8.72□□□□□ -1.01
PDLIM1-205ENST00000493949 TMEM68Q96MH6 324 aa8.72□□□□□ -1.01
PDLIM1-205ENST00000493949 BPESC1Q9GZL8 116 aa8.72□□□□□ -1.01
PDLIM1-205ENST00000493949 PRO1933Q9H354 126 aa8.72□□□□□ -1.01
PDLIM1-205ENST00000493949 FKBP11Q9NYL4 201 aa8.72□□□□□ -1.01
PDLIM1-205ENST00000493949 PXMP4Q9Y6I8 212 aa8.72□□□□□ -1.01
PDLIM1-205ENST00000493949 TRAV24A0A0B4J272 114 aa8.71□□□□□ -1.02
PDLIM1-205ENST00000493949 A0A1W2PPQ1 181 aa8.71□□□□□ -1.02
PDLIM1-205ENST00000493949 A0A1W2PR80 420 aa8.71□□□□□ -1.02
PDLIM1-205ENST00000493949 LRRC30A6NM36 301 aa8.71□□□□□ -1.02
PDLIM1-205ENST00000493949 H3BP45 60 aa8.71□□□□□ -1.02
PDLIM1-205ENST00000493949 HMGB3O15347 200 aaKnown RBP8.71□□□□□ -1.02
PDLIM1-205ENST00000493949 NXPH2O95156 264 aa8.71□□□□□ -1.02
PDLIM1-205ENST00000493949 MT-CO2P00403 227 aa8.71□□□□□ -1.02
PDLIM1-205ENST00000493949 KRASP01116 189 aa8.71□□□□□ -1.02
PDLIM1-205ENST00000493949 MT-ND6P03923 174 aa8.71□□□□□ -1.02
PDLIM1-205ENST00000493949 RAC2P15153 192 aa8.71□□□□□ -1.02
PDLIM1-205ENST00000493949 TUBG1P23258 451 aa8.71□□□□□ -1.02
PDLIM1-205ENST00000493949 CDC34P49427 236 aaPredicted RBP8.71□□□□□ -1.02
PDLIM1-205ENST00000493949 RPL15P61313 204 aaKnown RBP8.71□□□□□ -1.02
PDLIM1-205ENST00000493949 RELQ04864 619 aaPredicted RBP8.71□□□□□ -1.02
PDLIM1-205ENST00000493949 ZNF146Q15072 292 aa8.71□□□□□ -1.02
PDLIM1-205ENST00000493949 ZNF585BQ52M93 769 aa8.71□□□□□ -1.02
PDLIM1-205ENST00000493949 SPANXN5Q5MJ07 72 aa8.71□□□□□ -1.02
PDLIM1-205ENST00000493949 TIMM23BQ5SRD1 257 aa8.71□□□□□ -1.02
PDLIM1-205ENST00000493949 Q6P435 159 aa8.71□□□□□ -1.02
PDLIM1-205ENST00000493949 TMEM108Q6UXF1 575 aa8.71□□□□□ -1.02
PDLIM1-205ENST00000493949 CPEB3Q8NE35 698 aaKnown RBP8.71□□□□□ -1.02
PDLIM1-205ENST00000493949 OR4F5Q8NH21 305 aa8.71□□□□□ -1.02
PDLIM1-205ENST00000493949 POM121L2Q96KW2 1035 aa8.71□□□□□ -1.02
PDLIM1-205ENST00000493949 OR4F4Q96R69 305 aa8.71□□□□□ -1.02
PDLIM1-205ENST00000493949 TUBG2Q9NRH3 451 aa8.71□□□□□ -1.02
PDLIM1-205ENST00000493949 RFNGQ9Y644 331 aa8.71□□□□□ -1.02
PDLIM1-205ENST00000493949 WNK2Q9Y3S1 2297 aa8.71□□□□□ -1.02
PDLIM1-205ENST00000493949 MDFIC2A0A1B0GVS7 189 aa8.7□□□□□ -1.02
PDLIM1-205ENST00000493949 TMEM30CPA0ZSE6 113 aa8.7□□□□□ -1.02
PDLIM1-205ENST00000493949 C11orf94C9JXX5 98 aa8.7□□□□□ -1.02
PDLIM1-205ENST00000493949 FNDC10F2Z333 226 aa8.7□□□□□ -1.02
PDLIM1-205ENST00000493949 LILRA1O75019 489 aa8.7□□□□□ -1.02
PDLIM1-205ENST00000493949 IGLV2-14P01704 120 aa8.7□□□□□ -1.02
PDLIM1-205ENST00000493949 IAPPP10997 89 aa8.7□□□□□ -1.02
PDLIM1-205ENST00000493949 SELEP16581 610 aa8.7□□□□□ -1.02
PDLIM1-205ENST00000493949 NDUFB7P17568 137 aa8.7□□□□□ -1.02
PDLIM1-205ENST00000493949 BTF3P20290 206 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms