RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 A0A0J9YY10 115 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 A0A1B0GX78 115 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 SCO2A0A1W2PP80 73 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 FOXS1O43638 330 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 NUDT14O95848 222 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 IGKV1D-33P01593 117 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 IGKV1-33P01594 117 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 IGHV3-7P01780 117 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 PEBP1P30086 187 aaKnown RBP5.75□□□□□ -1.49
VPS13B-205ENST00000493587 XGP55808 180 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 FHL1Q13642 323 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 KIR2DS5Q14953 304 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 PDCD1Q15116 288 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 PSG5Q15238 335 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 FOXI2Q6ZQN5 318 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 TBC1D26Q86UD7 250 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 ZNF525Q8N782 197 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 NHLRC2Q8NBF2 726 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 DDB2Q92466 427 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 NHP2Q9NX24 153 aaKnown RBP5.75□□□□□ -1.49
VPS13B-205ENST00000493587 PRR33A8MZF0 331 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 FOXH1O75593 365 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 COX8AP10176 69 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 FCER1GP30273 86 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 MFAP2P55001 183 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 FUT7Q11130 342 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 RNPS1Q15287 305 aaKnown RBP5.75□□□□□ -1.49
VPS13B-205ENST00000493587 GUSBP1Q15486 140 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 SP5Q6BEB4 398 aaPredicted RBP5.75□□□□□ -1.49
VPS13B-205ENST00000493587 ZAR1Q86SH2 424 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 OR51H1Q8NH63 302 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 GLMPQ8WWB7 406 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 KCNK17Q96T54 332 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 APOOQ9BUR5 198 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 GCM1Q9NP62 436 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 DEC1Q9P2X7 70 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 COA3Q9Y2R0 106 aaPredicted RBP5.75□□□□□ -1.49
VPS13B-205ENST00000493587 hADV38S2A0JD32 116 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 C2orf70A6NJV1 201 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 K7ERJ3 54 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 RER1O15258 196 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 COL9A1P20849 921 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 FOXA3P55318 350 aaPredicted RBP5.75□□□□□ -1.49
VPS13B-205ENST00000493587 QRFPP83859 136 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 VWC2Q2TAL6 325 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 LYSMD4Q5XG99 296 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 LINC00173Q6ZV60 143 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 SMRP1Q8NCR6 262 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 PRELID3AQ96N28 172 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 TMEM222Q9H0R3 208 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 LSM4Q9Y4Z0 139 aaKnown RBP5.75□□□□□ -1.49
VPS13B-205ENST00000493587 HEBP2Q9Y5Z4 205 aa5.75□□□□□ -1.49
VPS13B-205ENST00000493587 VPS13AQ96RL7 3174 aa5.74□□□□□ -1.49
VPS13B-205ENST00000493587 CFAP54Q96N23 3096 aa5.74□□□□□ -1.49
VPS13B-205ENST00000493587 SNCGO76070 127 aa5.74□□□□□ -1.49
VPS13B-205ENST00000493587 PRNPP04156 253 aa5.74□□□□□ -1.49
VPS13B-205ENST00000493587 SLC23A3Q6PIS1 610 aa5.74□□□□□ -1.49
VPS13B-205ENST00000493587 ANKRD37Q7Z713 158 aa5.74□□□□□ -1.49
VPS13B-205ENST00000493587 CDRT4Q8N9R6 151 aa5.74□□□□□ -1.49
VPS13B-205ENST00000493587 C1QTNF5Q9BXJ0 243 aa5.74□□□□□ -1.49
VPS13B-205ENST00000493587 TNFRSF19Q9NS68 423 aa5.74□□□□□ -1.49
VPS13B-205ENST00000493587 A0A1W2PRD5 423 aa5.74□□□□□ -1.49
VPS13B-205ENST00000493587 A0A1W2PRF3 423 aa5.74□□□□□ -1.49
VPS13B-205ENST00000493587 A0A1W2PRM7 423 aa5.74□□□□□ -1.49
VPS13B-205ENST00000493587 SMIM9A6NGZ8 99 aa5.74□□□□□ -1.49
VPS13B-205ENST00000493587 LRRC30A6NM36 301 aa5.74□□□□□ -1.49
VPS13B-205ENST00000493587 TMPRSS2O15393 492 aa5.74□□□□□ -1.49
VPS13B-205ENST00000493587 DHHO43323 396 aa5.74□□□□□ -1.49
VPS13B-205ENST00000493587 CSN3P07498 182 aa5.74□□□□□ -1.49
VPS13B-205ENST00000493587 SMIM10L1P0DMW3 83 aa5.74□□□□□ -1.49
VPS13B-205ENST00000493587 KLRD1Q13241 179 aa5.74□□□□□ -1.49
VPS13B-205ENST00000493587 TMEM196Q5HYL7 178 aa5.74□□□□□ -1.49
VPS13B-205ENST00000493587 SMIM10Q96HG1 83 aa5.74□□□□□ -1.49
VPS13B-205ENST00000493587 FRYLO94915 3013 aa5.74□□□□□ -1.49
VPS13B-205ENST00000493587 SYNGR2O43760 224 aa5.73□□□□□ -1.49
VPS13B-205ENST00000493587 OR5AL1P0C617 328 aa5.73□□□□□ -1.49
VPS13B-205ENST00000493587 ASAH2BP0C7U1 165 aa5.73□□□□□ -1.49
VPS13B-205ENST00000493587 PSG2P11465 335 aa5.73□□□□□ -1.49
VPS13B-205ENST00000493587 FCGR2AP12318 317 aa5.73□□□□□ -1.49
VPS13B-205ENST00000493587 FAM162BQ5T6X4 162 aa5.73□□□□□ -1.49
VPS13B-205ENST00000493587 FAM159AQ6UWV7 190 aa5.73□□□□□ -1.49
VPS13B-205ENST00000493587 ZDHHC23Q8IYP9 409 aa5.73□□□□□ -1.49
VPS13B-205ENST00000493587 SPEM1Q8N4L4 309 aa5.73□□□□□ -1.49
VPS13B-205ENST00000493587 TMEM178AQ8NBL3 297 aa5.73□□□□□ -1.49
VPS13B-205ENST00000493587 RNASE7Q9H1E1 156 aaKnown RBP5.73□□□□□ -1.49
VPS13B-205ENST00000493587 LIME1Q9H400 295 aa5.73□□□□□ -1.49
VPS13B-205ENST00000493587 MAP1LC3AQ9H492 121 aa5.73□□□□□ -1.49
VPS13B-205ENST00000493587 ZNF442Q9H7R0 627 aa5.73□□□□□ -1.49
VPS13B-205ENST00000493587 KCNIP2Q9NS61 270 aa5.73□□□□□ -1.49
VPS13B-205ENST00000493587 BRWD1Q9NSI6 2320 aa5.73□□□□□ -1.49
VPS13B-205ENST00000493587 BSNQ9UPA5 3926 aa5.73□□□□□ -1.49
VPS13B-205ENST00000493587 A0A1W2PRE2 83 aa5.73□□□□□ -1.49
VPS13B-205ENST00000493587 IFI6P09912 130 aa5.73□□□□□ -1.49
VPS13B-205ENST00000493587 OR9G9P0C7N8 305 aa5.73□□□□□ -1.49
VPS13B-205ENST00000493587 CTLA4P16410 223 aa5.73□□□□□ -1.49
VPS13B-205ENST00000493587 IL11P20809 199 aa5.73□□□□□ -1.49
VPS13B-205ENST00000493587 CD38P28907 300 aa5.73□□□□□ -1.49
VPS13B-205ENST00000493587 EDDM3BP56851 147 aa5.73□□□□□ -1.49
VPS13B-205ENST00000493587 ID3Q02535 119 aa5.73□□□□□ -1.49
VPS13B-205ENST00000493587 WDR5BQ86VZ2 330 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms