RNA–Protein interactions for RNA: ENST00000492816.6

FN1-224, Transcript of fibronectin 1, humanhuman

TSL 5

Gene FN1, Length 9,171 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-224ENST00000492816 CKAP5Q14008 2032 aa4.55□□□□□ -1.68
FN1-224ENST00000492816 IGHV3-35A0A0C4DH35 117 aa4.55□□□□□ -1.68
FN1-224ENST00000492816 A0A0G2JNJ9 132 aa4.55□□□□□ -1.68
FN1-224ENST00000492816 GAGE10A6NGK3 116 aa4.55□□□□□ -1.68
FN1-224ENST00000492816 INS-IGF2F8WCM5 200 aa4.55□□□□□ -1.68
FN1-224ENST00000492816 RFPL3SP0C7P2 107 aa4.55□□□□□ -1.68
FN1-224ENST00000492816 VWC2Q2TAL6 325 aa4.55□□□□□ -1.68
FN1-224ENST00000492816 ASCL2Q99929 193 aa4.55□□□□□ -1.68
FN1-224ENST00000492816 MRPL13Q9BYD1 178 aaKnown RBP4.55□□□□□ -1.68
FN1-224ENST00000492816 BPESC1Q9GZL8 116 aa4.55□□□□□ -1.68
FN1-224ENST00000492816 Q9UFV3 132 aa4.55□□□□□ -1.68
FN1-224ENST00000492816 LOC102724200A0A096LPH7 203 aaPredicted RBP4.55□□□□□ -1.68
FN1-224ENST00000492816 DEFB130BP0DP73 79 aa4.55□□□□□ -1.68
FN1-224ENST00000492816 DEFB130AP0DP74 79 aa4.55□□□□□ -1.68
FN1-224ENST00000492816 GATA2P23769 480 aaPredicted RBP4.55□□□□□ -1.68
FN1-224ENST00000492816 DCTDP32321 178 aa4.55□□□□□ -1.68
FN1-224ENST00000492816 P2RY1P47900 373 aa4.55□□□□□ -1.68
FN1-224ENST00000492816 RPS11P62280 158 aaKnown RBP eCLIP4.55□□□□□ -1.68
FN1-224ENST00000492816 ALKAL2Q6UX46 152 aa4.55□□□□□ -1.68
FN1-224ENST00000492816 CIARTQ8N365 385 aaPredicted RBP4.55□□□□□ -1.68
FN1-224ENST00000492816 THAP8Q8NA92 274 aa4.55□□□□□ -1.68
FN1-224ENST00000492816 IGHV3OR16-13A0A075B7E8 117 aa4.55□□□□□ -1.68
FN1-224ENST00000492816 IGHV3-74A0A0B4J1X5 117 aa4.55□□□□□ -1.68
FN1-224ENST00000492816 MOSPD3O75425 235 aa4.55□□□□□ -1.68
FN1-224ENST00000492816 HOXA5P20719 270 aa4.55□□□□□ -1.68
FN1-224ENST00000492816 CD81P60033 236 aa4.55□□□□□ -1.68
FN1-224ENST00000492816 TMEM155Q4W5P6 130 aa4.55□□□□□ -1.68
FN1-224ENST00000492816 ZNF525Q8N782 197 aa4.55□□□□□ -1.68
FN1-224ENST00000492816 VCX2Q9H322 139 aa4.55□□□□□ -1.68
FN1-224ENST00000492816 PARD6AQ9NPB6 346 aa4.55□□□□□ -1.68
FN1-224ENST00000492816 SLC25A37Q9NYZ2 338 aa4.55□□□□□ -1.68
FN1-224ENST00000492816 AKAP6Q13023 2319 aa4.55□□□□□ -1.68
FN1-224ENST00000492816 KBTBD11-OT1A0A1B0GTJ5 212 aa4.55□□□□□ -1.68
FN1-224ENST00000492816 PSG2P11465 335 aa4.55□□□□□ -1.68
FN1-224ENST00000492816 SEC11AP67812 179 aa4.55□□□□□ -1.68
FN1-224ENST00000492816 ACTL10Q5JWF8 245 aa4.55□□□□□ -1.68
FN1-224ENST00000492816 Q6ZWC4 215 aa4.55□□□□□ -1.68
FN1-224ENST00000492816 KCNE5Q9UJ90 142 aa4.55□□□□□ -1.68
FN1-224ENST00000492816 TRBV20OR9-2A0A075B6H5 130 aa4.54□□□□□ -1.68
FN1-224ENST00000492816 HKR1P10072 659 aa4.54□□□□□ -1.68
FN1-224ENST00000492816 FABP4P15090 132 aa4.54□□□□□ -1.68
FN1-224ENST00000492816 PVRIGQ6DKI7 326 aa4.54□□□□□ -1.68
FN1-224ENST00000492816 Q6ZS92 163 aa4.54□□□□□ -1.68
FN1-224ENST00000492816 RNASEH2CQ8TDP1 164 aaKnown RBP4.54□□□□□ -1.68
FN1-224ENST00000492816 RNF133Q8WVZ7 376 aa4.54□□□□□ -1.68
FN1-224ENST00000492816 EVX1P49640 407 aa4.54□□□□□ -1.68
FN1-224ENST00000492816 FGF8P55075 233 aaPredicted RBP4.54□□□□□ -1.68
FN1-224ENST00000492816 ZFP36L1Q07352 338 aaKnown RBP4.54□□□□□ -1.68
FN1-224ENST00000492816 C18orf12Q96KH6 178 aa4.54□□□□□ -1.68
FN1-224ENST00000492816 DMRTA2Q96SC8 542 aa4.54□□□□□ -1.68
FN1-224ENST00000492816 ALX4Q9H161 411 aaPredicted RBP4.54□□□□□ -1.68
FN1-224ENST00000492816 NEU3Q9UQ49 428 aa4.54□□□□□ -1.68
FN1-224ENST00000492816 SCN2AQ99250 2005 aa4.54□□□□□ -1.68
FN1-224ENST00000492816 MBD3L4A6NDZ8 208 aaPredicted RBP4.54□□□□□ -1.68
FN1-224ENST00000492816 MBD3L3A6NE82 208 aaPredicted RBP4.54□□□□□ -1.68
FN1-224ENST00000492816 MBD3L5A6NJ08 208 aaPredicted RBP4.54□□□□□ -1.68
FN1-224ENST00000492816 POLR2IP36954 125 aaKnown RBP4.54□□□□□ -1.68
FN1-224ENST00000492816 MBD3L2Q8NHZ7 208 aaPredicted RBP4.54□□□□□ -1.68
FN1-224ENST00000492816 TSKUQ8WUA8 353 aa4.54□□□□□ -1.68
FN1-224ENST00000492816 TMEM190Q8WZ59 177 aa4.54□□□□□ -1.68
FN1-224ENST00000492816 SRXN1Q9BYN0 137 aa4.54□□□□□ -1.68
FN1-224ENST00000492816 COL6A6A6NMZ7 2263 aa4.54□□□□□ -1.68
FN1-224ENST00000492816 ACACAQ13085 2346 aa4.54□□□□□ -1.68
FN1-224ENST00000492816 RAE1P78406 368 aaKnown RBP4.54□□□□□ -1.68
FN1-224ENST00000492816 C14orf177Q52M58 125 aa4.54□□□□□ -1.68
FN1-224ENST00000492816 TMEM170BQ5T4T1 132 aa4.54□□□□□ -1.68
FN1-224ENST00000492816 SH2D6Q7Z4S9 175 aa4.54□□□□□ -1.68
FN1-224ENST00000492816 PRSS33Q8NF86 280 aa4.54□□□□□ -1.68
FN1-224ENST00000492816 NDUFA12Q9UI09 145 aa4.54□□□□□ -1.68
FN1-224ENST00000492816 MSGN1A6NI15 193 aa4.54□□□□□ -1.68
FN1-224ENST00000492816 B4DEV8 164 aa4.54□□□□□ -1.68
FN1-224ENST00000492816 CD74P04233 296 aa4.54□□□□□ -1.68
FN1-224ENST00000492816 IFI6P09912 130 aa4.54□□□□□ -1.68
FN1-224ENST00000492816 PGFP49763 221 aa4.54□□□□□ -1.68
FN1-224ENST00000492816 TIAL1Q01085 375 aaKnown RBP eCLIP4.54□□□□□ -1.683e-7■■■□□ 15.1
FN1-224ENST00000492816 MBNL2Q5VZF2 373 aaKnown RBP4.54□□□□□ -1.68
FN1-224ENST00000492816 MORN3Q6PF18 240 aaPredicted RBP4.54□□□□□ -1.68
FN1-224ENST00000492816 DLEU7Q6UYE1 221 aa4.54□□□□□ -1.68
FN1-224ENST00000492816 DPPA3Q6W0C5 159 aa4.54□□□□□ -1.68
FN1-224ENST00000492816 VPS25Q9BRG1 176 aa4.54□□□□□ -1.68
FN1-224ENST00000492816 THSD7AQ9UPZ6 1657 aa4.54□□□□□ -1.68
FN1-224ENST00000492816 LINC01549A6NIU2 74 aa4.54□□□□□ -1.68
FN1-224ENST00000492816 DEFA6Q01524 100 aa4.54□□□□□ -1.68
FN1-224ENST00000492816 CELF2-AS1Q8N7Q2 184 aa4.54□□□□□ -1.68
FN1-224ENST00000492816 SPOCK3Q9BQ16 436 aa4.54□□□□□ -1.68
FN1-224ENST00000492816 ST20Q9HBF5 79 aa4.54□□□□□ -1.68
FN1-224ENST00000492816 FHITP49789 147 aa4.54□□□□□ -1.68
FN1-224ENST00000492816 VAX1Q5SQQ9 334 aa4.54□□□□□ -1.68
FN1-224ENST00000492816 MRM1Q6IN84 353 aaKnown RBP4.54□□□□□ -1.68
FN1-224ENST00000492816 SHISA2Q6UWI4 295 aa4.54□□□□□ -1.68
FN1-224ENST00000492816 FAM216AQ8WUB2 273 aa4.54□□□□□ -1.68
FN1-224ENST00000492816 HLA-DRB1P01911 266 aa4.53□□□□□ -1.68
FN1-224ENST00000492816 C8orf88P0DMB2 117 aa4.53□□□□□ -1.68
FN1-224ENST00000492816 PNRC1Q12796 327 aaPredicted RBP4.53□□□□□ -1.68
FN1-224ENST00000492816 TMEM219Q86XT9 240 aa4.53□□□□□ -1.68
FN1-224ENST00000492816 SMAD5-AS1Q9Y6J3 95 aa4.53□□□□□ -1.68
FN1-224ENST00000492816 CTXND1A0A1B0GTU2 59 aa4.53□□□□□ -1.68
FN1-224ENST00000492816 STAG3L3P0CL85 134 aa4.53□□□□□ -1.68
FN1-224ENST00000492816 CLEC2DQ9UHP7 191 aa4.53□□□□□ -1.68
FN1-224ENST00000492816 XIRP1Q702N8 1843 aaKnown RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms