RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 TXNDC17Q9BRA2 123 aa8.74□□□□□ -1.01
USP4-214ENST00000491791 SIRT7Q9NRC8 400 aa8.74□□□□□ -1.01
USP4-214ENST00000491791 HCFC1P51610 2035 aa8.74□□□□□ -1.01
USP4-214ENST00000491791 TACC2O95359 2948 aa8.74□□□□□ -1.01
USP4-214ENST00000491791 A0A1W2PPH5 198 aa8.73□□□□□ -1.01
USP4-214ENST00000491791 SMCO3A2RU48 225 aa8.73□□□□□ -1.01
USP4-214ENST00000491791 SRRM4A7MD48 611 aaKnown RBP8.73□□□□□ -1.01
USP4-214ENST00000491791 PLAUP00749 431 aa8.73□□□□□ -1.01
USP4-214ENST00000491791 OR13C7P0DN81 318 aa8.73□□□□□ -1.01
USP4-214ENST00000491791 CCL3L1P16619 93 aa8.73□□□□□ -1.01
USP4-214ENST00000491791 CTRB1P17538 263 aa8.73□□□□□ -1.01
USP4-214ENST00000491791 AGAP20933 346 aa8.73□□□□□ -1.01
USP4-214ENST00000491791 USF1P22415 310 aaPredicted RBP8.73□□□□□ -1.01
USP4-214ENST00000491791 HAGHQ16775 308 aa8.73□□□□□ -1.01
USP4-214ENST00000491791 FFAR4Q5NUL3 377 aa8.73□□□□□ -1.01
USP4-214ENST00000491791 AVPI1Q5T686 147 aa8.73□□□□□ -1.01
USP4-214ENST00000491791 CTRB2Q6GPI1 263 aa8.73□□□□□ -1.01
USP4-214ENST00000491791 LCN15Q6UWW0 184 aa8.73□□□□□ -1.01
USP4-214ENST00000491791 SSX9Q7RTT3 188 aa8.73□□□□□ -1.01
USP4-214ENST00000491791 VKORC1L1Q8N0U8 176 aa8.73□□□□□ -1.01
USP4-214ENST00000491791 CYB561D1Q8N8Q1 229 aa8.73□□□□□ -1.01
USP4-214ENST00000491791 LY6G5BQ8NDX9 201 aa8.73□□□□□ -1.01
USP4-214ENST00000491791 BEND2Q8NDZ0 799 aa8.73□□□□□ -1.01
USP4-214ENST00000491791 SLC24A4Q8NFF2 622 aa8.73□□□□□ -1.01
USP4-214ENST00000491791 OR4C13Q8NGP0 309 aa8.73□□□□□ -1.01
USP4-214ENST00000491791 OR1L8Q8NGR8 309 aa8.73□□□□□ -1.01
USP4-214ENST00000491791 RXFP4Q8TDU9 374 aa8.73□□□□□ -1.01
USP4-214ENST00000491791 LHX4Q969G2 390 aa8.73□□□□□ -1.01
USP4-214ENST00000491791 C1orf159Q96HA4 380 aa8.73□□□□□ -1.01
USP4-214ENST00000491791 NIPSNAP3BQ9BS92 247 aa8.73□□□□□ -1.01
USP4-214ENST00000491791 TMEM133Q9H2Q1 129 aa8.73□□□□□ -1.01
USP4-214ENST00000491791 RPS10P5Q9NQ39 176 aa8.73□□□□□ -1.01
USP4-214ENST00000491791 NDUFA4L2Q9NRX3 87 aa8.73□□□□□ -1.01
USP4-214ENST00000491791 OR51B2Q9Y5P1 312 aa8.73□□□□□ -1.01
USP4-214ENST00000491791 ADGRG4Q8IZF6 3080 aa8.72□□□□□ -1.01
USP4-214ENST00000491791 TEX50A0A1B0GTY4 177 aa8.72□□□□□ -1.01
USP4-214ENST00000491791 IGLV1-47P01700 117 aa8.72□□□□□ -1.01
USP4-214ENST00000491791 IGHV3-7P01780 117 aa8.72□□□□□ -1.01
USP4-214ENST00000491791 IGKV1-16P04430 117 aa8.72□□□□□ -1.01
USP4-214ENST00000491791 IGHV1-8P0DP01 117 aa8.72□□□□□ -1.01
USP4-214ENST00000491791 NPY1RP25929 384 aa8.72□□□□□ -1.01
USP4-214ENST00000491791 IL3RAP26951 378 aa8.72□□□□□ -1.01
USP4-214ENST00000491791 RPL29P47914 159 aaKnown RBP8.72□□□□□ -1.01
USP4-214ENST00000491791 LGALS7P47929 136 aa8.72□□□□□ -1.01
USP4-214ENST00000491791 HOXA1P49639 335 aaPredicted RBP8.72□□□□□ -1.01
USP4-214ENST00000491791 GNG10P50151 68 aa8.72□□□□□ -1.01
USP4-214ENST00000491791 RAB13P51153 203 aa8.72□□□□□ -1.01
USP4-214ENST00000491791 PVRIGQ6DKI7 326 aa8.72□□□□□ -1.01
USP4-214ENST00000491791 C11orf71Q6IPW1 123 aa8.72□□□□□ -1.01
USP4-214ENST00000491791 C1QL4Q86Z23 238 aa8.72□□□□□ -1.01
USP4-214ENST00000491791 ABHD12Q8N2K0 398 aa8.72□□□□□ -1.01
USP4-214ENST00000491791 PNKDQ8N490 385 aa8.72□□□□□ -1.01
USP4-214ENST00000491791 CACNG8Q8WXS5 425 aa8.72□□□□□ -1.01
USP4-214ENST00000491791 RAB24Q969Q5 203 aa8.72□□□□□ -1.01
USP4-214ENST00000491791 HIST1H2BAQ96A08 127 aa8.72□□□□□ -1.01
USP4-214ENST00000491791 MGST2Q99735 147 aa8.72□□□□□ -1.01
USP4-214ENST00000491791 MRPL20Q9BYC9 149 aaKnown RBP8.72□□□□□ -1.01
USP4-214ENST00000491791 ENY2Q9NPA8 101 aa8.72□□□□□ -1.01
USP4-214ENST00000491791 CBLN4Q9NTU7 201 aa8.72□□□□□ -1.01
USP4-214ENST00000491791 GNG13Q9P2W3 67 aa8.72□□□□□ -1.01
USP4-214ENST00000491791 PRELID1Q9Y255 219 aa8.72□□□□□ -1.01
USP4-214ENST00000491791 WASHC3Q9Y3C0 194 aa8.72□□□□□ -1.01
USP4-214ENST00000491791 ARFGEF3Q5TH69 2177 aa8.72□□□□□ -1.01
USP4-214ENST00000491791 CELSR1Q9NYQ6 3014 aa8.72□□□□□ -1.01
USP4-214ENST00000491791 SETD2Q9BYW2 2564 aaPredicted RBP8.71□□□□□ -1.01
USP4-214ENST00000491791 PCNX1Q96RV3 2341 aa8.71□□□□□ -1.01
USP4-214ENST00000491791 PDZD2O15018 2839 aa8.71□□□□□ -1.02
USP4-214ENST00000491791 A0A1B0GV50 99 aa8.71□□□□□ -1.02
USP4-214ENST00000491791 FAM90A27PA6NNH2 459 aa8.71□□□□□ -1.02
USP4-214ENST00000491791 M0R036 132 aa8.71□□□□□ -1.02
USP4-214ENST00000491791 YIF1AO95070 293 aa8.71□□□□□ -1.02
USP4-214ENST00000491791 CA2P00918 260 aa8.71□□□□□ -1.02
USP4-214ENST00000491791 IGLV2-23P01705 113 aa8.71□□□□□ -1.02
USP4-214ENST00000491791 CRYBA1P05813 215 aa8.71□□□□□ -1.02
USP4-214ENST00000491791 SNRNP70P08621 437 aaKnown RBP8.71□□□□□ -1.02
USP4-214ENST00000491791 SAA1P0DJI8 122 aaPredicted RBP8.71□□□□□ -1.02
USP4-214ENST00000491791 GPX4P36969 197 aaPredicted RBP8.71□□□□□ -1.02
USP4-214ENST00000491791 CD81P60033 236 aa8.71□□□□□ -1.02
USP4-214ENST00000491791 MEF2BQ02080 365 aaPredicted RBP8.71□□□□□ -1.02
USP4-214ENST00000491791 RAB31Q13636 194 aa8.71□□□□□ -1.02
USP4-214ENST00000491791 SSX2Q16385 188 aa8.71□□□□□ -1.02
USP4-214ENST00000491791 ARSJQ5FYB0 599 aaPredicted RBP8.71□□□□□ -1.02
USP4-214ENST00000491791 WDR25Q64LD2 544 aaPredicted RBP8.71□□□□□ -1.02
USP4-214ENST00000491791 TEPPQ6URK8 271 aa8.71□□□□□ -1.02
USP4-214ENST00000491791 DTX2Q86UW9 622 aa8.71□□□□□ -1.02
USP4-214ENST00000491791 NEU4Q8WWR8 484 aaPredicted RBP8.71□□□□□ -1.02
USP4-214ENST00000491791 FLYWCH2Q96CP2 140 aaKnown RBP8.71□□□□□ -1.02
USP4-214ENST00000491791 RNF5Q99942 180 aa8.71□□□□□ -1.02
USP4-214ENST00000491791 C19orf24Q9BVV8 132 aa8.71□□□□□ -1.02
USP4-214ENST00000491791 GGTLC1Q9BX51 225 aa8.71□□□□□ -1.02
USP4-214ENST00000491791 PLEKHA3Q9HB20 300 aa8.71□□□□□ -1.02
USP4-214ENST00000491791 SDF2L1Q9HCN8 221 aa8.71□□□□□ -1.02
USP4-214ENST00000491791 MIOXQ9UGB7 285 aa8.71□□□□□ -1.02
USP4-214ENST00000491791 TET2Q6N021 2002 aaPredicted RBP8.7□□□□□ -1.02
USP4-214ENST00000491791 DCHS2Q6V1P9 2916 aa8.7□□□□□ -1.02
USP4-214ENST00000491791 STAG3L2P0CL84 134 aa8.7□□□□□ -1.02
USP4-214ENST00000491791 STAG3L3P0CL85 134 aa8.7□□□□□ -1.02
USP4-214ENST00000491791 COL8A2P25067 703 aa8.7□□□□□ -1.02
USP4-214ENST00000491791 CDC34P49427 236 aaPredicted RBP8.7□□□□□ -1.02
USP4-214ENST00000491791 RND2P52198 227 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms