RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 COA4Q9NYJ1 87 aa6.46□□□□□ -1.38
SF1-218ENST00000489544 CACNG5Q9UF02 275 aa6.46□□□□□ -1.38
SF1-218ENST00000489544 ZNF580Q9UK33 172 aa6.46□□□□□ -1.38
SF1-218ENST00000489544 IGLC7A0M8Q6 106 aa6.45□□□□□ -1.38
SF1-218ENST00000489544 MPTX1A8MV57 137 aa6.45□□□□□ -1.38
SF1-218ENST00000489544 ST8SIA3O43173 380 aa6.45□□□□□ -1.38
SF1-218ENST00000489544 ADAP1O75689 374 aa6.45□□□□□ -1.38
SF1-218ENST00000489544 TSPAN15O95858 294 aa6.45□□□□□ -1.38
SF1-218ENST00000489544 ELANEP08246 267 aa6.45□□□□□ -1.38
SF1-218ENST00000489544 HOXB5P09067 269 aa6.45□□□□□ -1.38
SF1-218ENST00000489544 TRAPPC2P0DI81 140 aa6.45□□□□□ -1.38
SF1-218ENST00000489544 TRAPPC2BP0DI82 140 aa6.45□□□□□ -1.38
SF1-218ENST00000489544 RAB9AP51151 201 aa6.45□□□□□ -1.38
SF1-218ENST00000489544 WT1-ASQ06250 92 aa6.45□□□□□ -1.38
SF1-218ENST00000489544 FOXE3Q13461 319 aa6.45□□□□□ -1.38
SF1-218ENST00000489544 NMSQ5H8A3 153 aa6.45□□□□□ -1.38
SF1-218ENST00000489544 CXorf66Q5JRM2 361 aaPredicted RBP6.45□□□□□ -1.38
SF1-218ENST00000489544 FAM219AQ8IW50 185 aa6.45□□□□□ -1.38
SF1-218ENST00000489544 DUSP18Q8NEJ0 188 aa6.45□□□□□ -1.38
SF1-218ENST00000489544 OR1L8Q8NGR8 309 aa6.45□□□□□ -1.38
SF1-218ENST00000489544 FAM110DQ8TAY7 271 aaPredicted RBP6.45□□□□□ -1.38
SF1-218ENST00000489544 DUX3Q96PT4 197 aa6.45□□□□□ -1.38
SF1-218ENST00000489544 SPIN2AQ99865 258 aa6.45□□□□□ -1.38
SF1-218ENST00000489544 SPIN2BQ9BPZ2 258 aa6.45□□□□□ -1.38
SF1-218ENST00000489544 GON7Q9BXV9 100 aa6.45□□□□□ -1.38
SF1-218ENST00000489544 ALX4Q9H161 411 aaPredicted RBP6.45□□□□□ -1.38
SF1-218ENST00000489544 GNB4Q9HAV0 340 aa6.45□□□□□ -1.38
SF1-218ENST00000489544 NDUFA4L2Q9NRX3 87 aa6.45□□□□□ -1.38
SF1-218ENST00000489544 PRNDQ9UKY0 176 aa6.45□□□□□ -1.38
SF1-218ENST00000489544 TET2Q6N021 2002 aaPredicted RBP6.45□□□□□ -1.38
SF1-218ENST00000489544 A0A0B4J2A0 478 aa6.44□□□□□ -1.38
SF1-218ENST00000489544 OR2J3O76001 311 aa6.44□□□□□ -1.38
SF1-218ENST00000489544 ATG12O94817 140 aa6.44□□□□□ -1.38
SF1-218ENST00000489544 IFNA17P01571 189 aa6.44□□□□□ -1.38
SF1-218ENST00000489544 IGHV3-11P01762 117 aa6.44□□□□□ -1.38
SF1-218ENST00000489544 TRGV3P03979 118 aa6.44□□□□□ -1.38
SF1-218ENST00000489544 OR13C7P0DN81 318 aa6.44□□□□□ -1.38
SF1-218ENST00000489544 PSMB6P28072 239 aa6.44□□□□□ -1.38
SF1-218ENST00000489544 TPPP2P59282 170 aa6.44□□□□□ -1.38
SF1-218ENST00000489544 DEFA1P59665 94 aa6.44□□□□□ -1.38
SF1-218ENST00000489544 DEFA3P59666 94 aa6.44□□□□□ -1.38
SF1-218ENST00000489544 HSPE1P61604 102 aaKnown RBP6.44□□□□□ -1.38
SF1-218ENST00000489544 RPL23AP62750 156 aaKnown RBP6.44□□□□□ -1.38
SF1-218ENST00000489544 DEFB136Q30KP8 78 aa6.44□□□□□ -1.38
SF1-218ENST00000489544 GGNBP1Q5YKI7 109 aa6.44□□□□□ -1.38
SF1-218ENST00000489544 C8orf86Q6ZUL3 223 aa6.44□□□□□ -1.38
SF1-218ENST00000489544 NDUFA11Q86Y39 141 aa6.44□□□□□ -1.38
SF1-218ENST00000489544 CADM3Q8N126 398 aa6.44□□□□□ -1.38
SF1-218ENST00000489544 TTC9CQ8N5M4 171 aa6.44□□□□□ -1.38
SF1-218ENST00000489544 RNF152Q8N8N0 203 aa6.44□□□□□ -1.38
SF1-218ENST00000489544 LRTM2Q8N967 370 aa6.44□□□□□ -1.38
SF1-218ENST00000489544 UXS1Q8NBZ7 420 aa6.44□□□□□ -1.38
SF1-218ENST00000489544 KLHL30-AS1Q8NEE0 82 aa6.44□□□□□ -1.38
SF1-218ENST00000489544 MYOZ3Q8TDC0 251 aa6.44□□□□□ -1.38
SF1-218ENST00000489544 IL22RA2Q969J5 263 aa6.44□□□□□ -1.38
SF1-218ENST00000489544 LSM10Q969L4 123 aaKnown RBP6.44□□□□□ -1.38
SF1-218ENST00000489544 SHPKQ9UHJ6 478 aa6.44□□□□□ -1.38
SF1-218ENST00000489544 DMRT1Q9Y5R6 373 aa6.44□□□□□ -1.38
SF1-218ENST00000489544 TSSC4Q9Y5U2 329 aaPredicted RBP6.44□□□□□ -1.38
SF1-218ENST00000489544 S4R3C0 116 aa6.44□□□□□ -1.38
SF1-218ENST00000489544 NPIPB5A8MRT5 1133 aa6.43□□□□□ -1.38
SF1-218ENST00000489544 NUDT19A8MXV4 375 aa6.43□□□□□ -1.38
SF1-218ENST00000489544 INMT-MINDY4F8WBC2 141 aa6.43□□□□□ -1.38
SF1-218ENST00000489544 CCSO14618 274 aa6.43□□□□□ -1.38
SF1-218ENST00000489544 NDUFB8O95169 186 aa6.43□□□□□ -1.38
SF1-218ENST00000489544 DUS4LO95620 317 aaKnown RBP6.43□□□□□ -1.38
SF1-218ENST00000489544 SULT1A3P0DMM9 295 aa6.43□□□□□ -1.38
SF1-218ENST00000489544 SULT1A4P0DMN0 295 aa6.43□□□□□ -1.38
SF1-218ENST00000489544 CTRB1P17538 263 aa6.43□□□□□ -1.38
SF1-218ENST00000489544 MECP2P51608 486 aaKnown RBP6.43□□□□□ -1.38
SF1-218ENST00000489544 MFAP2P55001 183 aa6.43□□□□□ -1.38
SF1-218ENST00000489544 SRPXP78539 464 aa6.43□□□□□ -1.38
SF1-218ENST00000489544 PRCDQ00LT1 54 aa6.43□□□□□ -1.38
SF1-218ENST00000489544 CTRB2Q6GPI1 263 aa6.43□□□□□ -1.38
SF1-218ENST00000489544 TMEM65Q6PI78 240 aa6.43□□□□□ -1.38
SF1-218ENST00000489544 PLET1Q6UQ28 207 aa6.43□□□□□ -1.38
SF1-218ENST00000489544 ZNF429Q86V71 674 aa6.43□□□□□ -1.38
SF1-218ENST00000489544 COMMD1Q8N668 190 aa6.43□□□□□ -1.38
SF1-218ENST00000489544 ZNF491Q8N8L2 437 aa6.43□□□□□ -1.38
SF1-218ENST00000489544 OR5M8Q8NGP6 311 aa6.43□□□□□ -1.38
SF1-218ENST00000489544 OR5B3Q8NH48 314 aa6.43□□□□□ -1.38
SF1-218ENST00000489544 COQ8AQ8NI60 647 aa6.43□□□□□ -1.38
SF1-218ENST00000489544 ZNF431Q8TF32 576 aaPredicted RBP6.43□□□□□ -1.38
SF1-218ENST00000489544 MITD1Q8WV92 249 aa6.43□□□□□ -1.38
SF1-218ENST00000489544 TMEM68Q96MH6 324 aa6.43□□□□□ -1.38
SF1-218ENST00000489544 FANCD2OSQ96PS1 177 aa6.43□□□□□ -1.38
SF1-218ENST00000489544 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.43□□□□□ -1.38
SF1-218ENST00000489544 FKBP11Q9NYL4 201 aa6.43□□□□□ -1.38
SF1-218ENST00000489544 TRRAPQ9Y4A5 3859 aa6.42□□□□□ -1.38
SF1-218ENST00000489544 IGHV3-21A0A0B4J1V1 117 aa6.42□□□□□ -1.38
SF1-218ENST00000489544 TRBV12-3P01733 135 aa6.42□□□□□ -1.38
SF1-218ENST00000489544 IGHV3-23P01764 117 aa6.42□□□□□ -1.38
SF1-218ENST00000489544 CRYGCP07315 174 aa6.42□□□□□ -1.38
SF1-218ENST00000489544 FGF2P09038 288 aa6.42□□□□□ -1.38
SF1-218ENST00000489544 DEFA4P12838 97 aa6.42□□□□□ -1.38
SF1-218ENST00000489544 CDX1P47902 265 aaPredicted RBP6.42□□□□□ -1.38
SF1-218ENST00000489544 RHOGP84095 191 aa6.42□□□□□ -1.38
SF1-218ENST00000489544 DCTN2Q13561 401 aaKnown RBP6.42□□□□□ -1.38
SF1-218ENST00000489544 SMCO1Q147U7 214 aa6.42□□□□□ -1.38
SF1-218ENST00000489544 C2orf68Q2NKX9 166 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms