RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 PLGRKTQ9HBL7 147 aa6.64□□□□□ -1.35
COL17A1-207ENST00000488320 C21orf62Q9NYP8 219 aa6.64□□□□□ -1.35
COL17A1-207ENST00000488320 SPATA2Q9UM82 520 aa6.64□□□□□ -1.35
COL17A1-207ENST00000488320 DIMT1Q9UNQ2 313 aaKnown RBP6.64□□□□□ -1.35
COL17A1-207ENST00000488320 RBMX2Q9Y388 322 aaKnown RBP6.64□□□□□ -1.35
COL17A1-207ENST00000488320 TMED3Q9Y3Q3 217 aa6.64□□□□□ -1.35
COL17A1-207ENST00000488320 FOXI3A8MTJ6 420 aaPredicted RBP6.63□□□□□ -1.35
COL17A1-207ENST00000488320 NACAE9PAV3 2078 aa6.63□□□□□ -1.35
COL17A1-207ENST00000488320 NUPL2O15504 423 aaKnown RBP6.63□□□□□ -1.35
COL17A1-207ENST00000488320 ST8SIA3O43173 380 aa6.63□□□□□ -1.35
COL17A1-207ENST00000488320 SLC22A5O76082 557 aa6.63□□□□□ -1.35
COL17A1-207ENST00000488320 DIRAS3O95661 229 aa6.63□□□□□ -1.35
COL17A1-207ENST00000488320 CD5P06127 495 aa6.63□□□□□ -1.35
COL17A1-207ENST00000488320 GIG44P09565 113 aaPredicted RBP6.63□□□□□ -1.35
COL17A1-207ENST00000488320 SPART-AS1P0CW21 52 aa6.63□□□□□ -1.35
COL17A1-207ENST00000488320 HTN3P15516 51 aa6.63□□□□□ -1.35
COL17A1-207ENST00000488320 TALDO1P37837 337 aa6.63□□□□□ -1.35
COL17A1-207ENST00000488320 SMCPP49901 116 aaPredicted RBP6.63□□□□□ -1.35
COL17A1-207ENST00000488320 OR2B8PP59922 312 aa6.63□□□□□ -1.35
COL17A1-207ENST00000488320 RELQ04864 619 aaPredicted RBP6.63□□□□□ -1.35
COL17A1-207ENST00000488320 INSL4Q14641 139 aa6.63□□□□□ -1.35
COL17A1-207ENST00000488320 SSX1Q16384 188 aa6.63□□□□□ -1.35
COL17A1-207ENST00000488320 PLAC9Q5JTB6 97 aa6.63□□□□□ -1.35
COL17A1-207ENST00000488320 FAM90A2PQ658T7 463 aa6.63□□□□□ -1.35
COL17A1-207ENST00000488320 H1FOOQ8IZA3 346 aaPredicted RBP6.63□□□□□ -1.35
COL17A1-207ENST00000488320 CBR4Q8N4T8 237 aa6.63□□□□□ -1.35
COL17A1-207ENST00000488320 DUSP18Q8NEJ0 188 aa6.63□□□□□ -1.35
COL17A1-207ENST00000488320 SCARB1Q8WTV0 552 aa6.63□□□□□ -1.35
COL17A1-207ENST00000488320 FAM210BQ96KR6 192 aa6.63□□□□□ -1.35
COL17A1-207ENST00000488320 AIFM2Q9BRQ8 373 aa6.63□□□□□ -1.35
COL17A1-207ENST00000488320 ATG101Q9BSB4 218 aa6.63□□□□□ -1.35
COL17A1-207ENST00000488320 RABAC1Q9UI14 185 aa6.63□□□□□ -1.35
COL17A1-207ENST00000488320 A0A075B6Q4 140 aa6.62□□□□□ -1.35
COL17A1-207ENST00000488320 IGLC7A0M8Q6 106 aa6.62□□□□□ -1.35
COL17A1-207ENST00000488320 CD1AP06126 327 aa6.62□□□□□ -1.35
COL17A1-207ENST00000488320 OR13C7P0DN81 318 aa6.62□□□□□ -1.35
COL17A1-207ENST00000488320 C4BPBP20851 252 aa6.62□□□□□ -1.35
COL17A1-207ENST00000488320 EMP1P54849 157 aa6.62□□□□□ -1.35
COL17A1-207ENST00000488320 HSD17B12Q53GQ0 312 aa6.62□□□□□ -1.35
COL17A1-207ENST00000488320 UBE2UQ5VVX9 321 aa6.62□□□□□ -1.35
COL17A1-207ENST00000488320 TRPT1Q86TN4 253 aaKnown RBP6.62□□□□□ -1.35
COL17A1-207ENST00000488320 MFSD4AQ8N468 514 aa6.62□□□□□ -1.35
COL17A1-207ENST00000488320 FAM24BQ8N5W8 94 aa6.62□□□□□ -1.35
COL17A1-207ENST00000488320 GDPD1Q8N9F7 314 aa6.62□□□□□ -1.35
COL17A1-207ENST00000488320 OR10W1Q8NGF6 305 aa6.62□□□□□ -1.35
COL17A1-207ENST00000488320 PHYHIPQ92561 330 aa6.62□□□□□ -1.35
COL17A1-207ENST00000488320 DGCR14Q96DF8 476 aaKnown RBP6.62□□□□□ -1.35
COL17A1-207ENST00000488320 RAB3CQ96E17 227 aa6.62□□□□□ -1.35
COL17A1-207ENST00000488320 ATP6V0BQ99437 205 aa6.62□□□□□ -1.35
COL17A1-207ENST00000488320 HSD17B10Q99714 261 aaKnown RBP6.62□□□□□ -1.35
COL17A1-207ENST00000488320 SRSF8Q9BRL6 282 aaKnown RBP6.62□□□□□ -1.35
COL17A1-207ENST00000488320 BET1LQ9NYM9 111 aa6.62□□□□□ -1.35
COL17A1-207ENST00000488320 IGHV3-66A0A0C4DH42 116 aa6.61□□□□□ -1.35
COL17A1-207ENST00000488320 KNCNA6PVL3 124 aa6.61□□□□□ -1.35
COL17A1-207ENST00000488320 DENRO43583 198 aaKnown RBP6.61□□□□□ -1.35
COL17A1-207ENST00000488320 WBP4O75554 376 aaKnown RBP6.61□□□□□ -1.35
COL17A1-207ENST00000488320 HLA-DQB1P01920 261 aa6.61□□□□□ -1.35
COL17A1-207ENST00000488320 SERPINE2P07093 398 aa6.61□□□□□ -1.35
COL17A1-207ENST00000488320 CTSGP08311 255 aa6.61□□□□□ -1.35
COL17A1-207ENST00000488320 TRAPPC2P0DI81 140 aa6.61□□□□□ -1.35
COL17A1-207ENST00000488320 TRAPPC2BP0DI82 140 aa6.61□□□□□ -1.35
COL17A1-207ENST00000488320 CD37P11049 281 aa6.61□□□□□ -1.35
COL17A1-207ENST00000488320 NFYAP23511 347 aaPredicted RBP6.61□□□□□ -1.35
COL17A1-207ENST00000488320 RAB11BQ15907 218 aa6.61□□□□□ -1.35
COL17A1-207ENST00000488320 ACTL10Q5JWF8 245 aa6.61□□□□□ -1.35
COL17A1-207ENST00000488320 ZNF485Q8NCK3 441 aa6.61□□□□□ -1.35
COL17A1-207ENST00000488320 ZNF555Q8NEP9 628 aa6.61□□□□□ -1.35
COL17A1-207ENST00000488320 PYDC1Q8WXC3 89 aa6.61□□□□□ -1.35
COL17A1-207ENST00000488320 ST8SIA2Q92186 375 aa6.61□□□□□ -1.35
COL17A1-207ENST00000488320 GINS3Q9BRX5 216 aa6.61□□□□□ -1.35
COL17A1-207ENST00000488320 HINT2Q9BX68 163 aa6.61□□□□□ -1.35
COL17A1-207ENST00000488320 QTRT1Q9BXR0 403 aaKnown RBP6.61□□□□□ -1.35
COL17A1-207ENST00000488320 YTHDF1Q9BYJ9 559 aaKnown RBP6.61□□□□□ -1.35
COL17A1-207ENST00000488320 TAS2R8Q9NYW2 309 aa6.61□□□□□ -1.35
COL17A1-207ENST00000488320 OR2W1Q9Y3N9 320 aa6.61□□□□□ -1.35
COL17A1-207ENST00000488320 TRAV2A0A0B4J234 112 aa6.6□□□□□ -1.35
COL17A1-207ENST00000488320 TRAV3A0A0B4J244 114 aa6.6□□□□□ -1.35
COL17A1-207ENST00000488320 NBDYA0A0U1RRE5 68 aa6.6□□□□□ -1.35
COL17A1-207ENST00000488320 EFCAB10A6NFE3 127 aa6.6□□□□□ -1.35
COL17A1-207ENST00000488320 ERICH4A6NGS2 130 aa6.6□□□□□ -1.35
COL17A1-207ENST00000488320 UPK2O00526 184 aa6.6□□□□□ -1.35
COL17A1-207ENST00000488320 MYL12BO14950 172 aa6.6□□□□□ -1.35
COL17A1-207ENST00000488320 GNB3P16520 340 aa6.6□□□□□ -1.35
COL17A1-207ENST00000488320 GADD45AP24522 165 aa6.6□□□□□ -1.35
COL17A1-207ENST00000488320 CLDN12P56749 244 aa6.6□□□□□ -1.35
COL17A1-207ENST00000488320 ST3GAL4Q11206 333 aa6.6□□□□□ -1.35
COL17A1-207ENST00000488320 C2orf76Q3KRA6 126 aa6.6□□□□□ -1.35
COL17A1-207ENST00000488320 TIMM50Q3ZCQ8 353 aa6.6□□□□□ -1.35
COL17A1-207ENST00000488320 ZNF66Q6ZN08 573 aa6.6□□□□□ -1.35
COL17A1-207ENST00000488320 LILRB2Q8N423 598 aa6.6□□□□□ -1.35
COL17A1-207ENST00000488320 MS4A15Q8N5U1 240 aa6.6□□□□□ -1.35
COL17A1-207ENST00000488320 CSNK1G2-AS1Q8NCQ2 148 aa6.6□□□□□ -1.35
COL17A1-207ENST00000488320 ZNF414Q96IQ9 312 aa6.6□□□□□ -1.35
COL17A1-207ENST00000488320 OR10C1Q96KK4 312 aa6.6□□□□□ -1.35
COL17A1-207ENST00000488320 AK6Q9Y3D8 172 aaKnown RBP6.6□□□□□ -1.35
COL17A1-207ENST00000488320 TEX50A0A1B0GTY4 177 aa6.59□□□□□ -1.35
COL17A1-207ENST00000488320 SLC17A2O00624 439 aa6.59□□□□□ -1.35
COL17A1-207ENST00000488320 TNFSF12O43508 249 aa6.59□□□□□ -1.35
COL17A1-207ENST00000488320 CIB2O75838 187 aa6.59□□□□□ -1.35
COL17A1-207ENST00000488320 IGLV2-14P01704 120 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms