RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 KLK6Q92876 244 aa0.84□□□□□ -2.27
GCFC2-209ENST00000486016 ARL5BQ96KC2 179 aa0.84□□□□□ -2.27
GCFC2-209ENST00000486016 PARD6GQ9BYG4 376 aaPredicted RBP0.84□□□□□ -2.27
GCFC2-209ENST00000486016 CST9LQ9H4G1 147 aa0.84□□□□□ -2.27
GCFC2-209ENST00000486016 EFCAB1Q9HAE3 211 aa0.84□□□□□ -2.27
GCFC2-209ENST00000486016 CISHQ9NSE2 258 aa0.84□□□□□ -2.27
GCFC2-209ENST00000486016 IL36BQ9NZH7 164 aa0.84□□□□□ -2.27
GCFC2-209ENST00000486016 GUCA1BQ9UMX6 200 aa0.84□□□□□ -2.27
GCFC2-209ENST00000486016 LSM5Q9Y4Y9 91 aaKnown RBP0.84□□□□□ -2.27
GCFC2-209ENST00000486016 PTPRBP23467 1997 aa0.84□□□□□ -2.28
GCFC2-209ENST00000486016 CCDC88CQ9P219 2028 aa0.83□□□□□ -2.28
GCFC2-209ENST00000486016 TRBV20OR9-2A0A075B6H5 130 aa0.83□□□□□ -2.28
GCFC2-209ENST00000486016 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.83□□□□□ -2.28
GCFC2-209ENST00000486016 TGIF2-C20orf24A0A0A6YYL0 155 aa0.83□□□□□ -2.28
GCFC2-209ENST00000486016 A0A0J9YY10 115 aa0.83□□□□□ -2.28
GCFC2-209ENST00000486016 TRBV10-2A0A0K0K1G8 114 aa0.83□□□□□ -2.28
GCFC2-209ENST00000486016 A0A1B0GV50 99 aa0.83□□□□□ -2.28
GCFC2-209ENST00000486016 A0A1B0GX78 115 aa0.83□□□□□ -2.28
GCFC2-209ENST00000486016 EEF1E1-BLOC1S5C9J1V9 151 aa0.83□□□□□ -2.28
GCFC2-209ENST00000486016 NOS1APO75052 506 aaPredicted RBP0.83□□□□□ -2.28
GCFC2-209ENST00000486016 CRPP02741 224 aa0.83□□□□□ -2.28
GCFC2-209ENST00000486016 C1QAP02745 245 aa0.83□□□□□ -2.28
GCFC2-209ENST00000486016 PRM2P04554 102 aa0.83□□□□□ -2.28
GCFC2-209ENST00000486016 OR5G3P0C626 314 aa0.83□□□□□ -2.28
GCFC2-209ENST00000486016 HIST1H1EP10412 219 aaKnown RBP0.83□□□□□ -2.28
GCFC2-209ENST00000486016 RPL18Q07020 188 aaKnown RBP0.83□□□□□ -2.28
GCFC2-209ENST00000486016 GRK1Q15835 563 aa0.83□□□□□ -2.28
GCFC2-209ENST00000486016 NNATQ16517 81 aa0.83□□□□□ -2.28
GCFC2-209ENST00000486016 Q1T7F1 81 aa0.83□□□□□ -2.28
GCFC2-209ENST00000486016 ARHGAP11BQ3KRB8 267 aa0.83□□□□□ -2.28
GCFC2-209ENST00000486016 HIST2H3PS2Q5TEC6 136 aa0.83□□□□□ -2.28
GCFC2-209ENST00000486016 PTRHD1Q6GMV3 140 aaKnown RBP0.83□□□□□ -2.28
GCFC2-209ENST00000486016 C8orf74Q6P047 294 aa0.83□□□□□ -2.28
GCFC2-209ENST00000486016 FAM173BQ6P4H8 233 aa0.83□□□□□ -2.28
GCFC2-209ENST00000486016 FP248Q71RG6 208 aaPredicted RBP0.83□□□□□ -2.28
GCFC2-209ENST00000486016 C1orf158Q8N1D5 194 aa0.83□□□□□ -2.28
GCFC2-209ENST00000486016 TMEM86BQ8N661 226 aa0.83□□□□□ -2.28
GCFC2-209ENST00000486016 SLC35B4Q969S0 331 aa0.83□□□□□ -2.28
GCFC2-209ENST00000486016 KIF24Q5T7B8 1368 aa0.83□□□□□ -2.28
GCFC2-209ENST00000486016 SDK1Q7Z5N4 2213 aa0.83□□□□□ -2.28
GCFC2-209ENST00000486016 IBA57-AS1B1ANH7 110 aa0.82□□□□□ -2.28
GCFC2-209ENST00000486016 F8W036 122 aa0.82□□□□□ -2.28
GCFC2-209ENST00000486016 M0R036 132 aa0.82□□□□□ -2.28
GCFC2-209ENST00000486016 KCNK1O00180 336 aa0.82□□□□□ -2.28
GCFC2-209ENST00000486016 SLC22A1O15245 554 aa0.82□□□□□ -2.28
GCFC2-209ENST00000486016 AHSA1O95433 338 aa0.82□□□□□ -2.28
GCFC2-209ENST00000486016 TNNC2P02585 160 aa0.82□□□□□ -2.28
GCFC2-209ENST00000486016 SUPT4H1P63272 117 aaKnown RBP0.82□□□□□ -2.28
GCFC2-209ENST00000486016 IFITM2Q01629 132 aa0.82□□□□□ -2.28
GCFC2-209ENST00000486016 OR2F1Q13607 317 aa0.82□□□□□ -2.28
GCFC2-209ENST00000486016 HIST3H3Q16695 136 aa0.82□□□□□ -2.28
GCFC2-209ENST00000486016 MBD3L1Q8WWY6 194 aa0.82□□□□□ -2.28
GCFC2-209ENST00000486016 WDR61Q9GZS3 305 aaKnown RBP0.82□□□□□ -2.28
GCFC2-209ENST00000486016 PARVGQ9HBI0 331 aa0.82□□□□□ -2.28
GCFC2-209ENST00000486016 CMTM6Q9NX76 183 aa0.82□□□□□ -2.28
GCFC2-209ENST00000486016 ADCY9O60503 1353 aa0.82□□□□□ -2.28
GCFC2-209ENST00000486016 SMARCA4P51532 1647 aa0.82□□□□□ -2.28
GCFC2-209ENST00000486016 RP1L1Q8IWN7 2480 aaPredicted RBP0.81□□□□□ -2.28
GCFC2-209ENST00000486016 RTTNQ86VV8 2226 aa0.81□□□□□ -2.28
GCFC2-209ENST00000486016 SNAPC4Q5SXM2 1469 aa0.81□□□□□ -2.28
GCFC2-209ENST00000486016 IRGMA1A4Y4 181 aa0.81□□□□□ -2.28
GCFC2-209ENST00000486016 TRAPPC13A5PLN9 417 aa0.81□□□□□ -2.28
GCFC2-209ENST00000486016 FABP5P3A8MUU1 101 aa0.81□□□□□ -2.28
GCFC2-209ENST00000486016 RPSAP08865 295 aaKnown RBP0.81□□□□□ -2.28
GCFC2-209ENST00000486016 LYNX1P0DP58 116 aa0.81□□□□□ -2.28
GCFC2-209ENST00000486016 RPS4Y1P22090 263 aaKnown RBP0.81□□□□□ -2.28
GCFC2-209ENST00000486016 NFYAP23511 347 aaPredicted RBP0.81□□□□□ -2.28
GCFC2-209ENST00000486016 FXYD2P54710 66 aa0.81□□□□□ -2.28
GCFC2-209ENST00000486016 SPCS3P61009 180 aa0.81□□□□□ -2.28
GCFC2-209ENST00000486016 UBE2IP63279 158 aaKnown RBP0.81□□□□□ -2.28
GCFC2-209ENST00000486016 CCL20P78556 96 aa0.81□□□□□ -2.28
GCFC2-209ENST00000486016 ELOBQ15370 118 aa0.81□□□□□ -2.28
GCFC2-209ENST00000486016 IMPG1Q17R60 797 aa0.81□□□□□ -2.28
GCFC2-209ENST00000486016 CCDC122Q5T0U0 273 aa0.81□□□□□ -2.28
GCFC2-209ENST00000486016 IBA57Q5T440 356 aaKnown RBP0.81□□□□□ -2.28
GCFC2-209ENST00000486016 SYPL2Q5VXT5 272 aa0.81□□□□□ -2.28
GCFC2-209ENST00000486016 Q6ZS49 121 aa0.81□□□□□ -2.28
GCFC2-209ENST00000486016 OR8B3Q8NGG8 313 aa0.81□□□□□ -2.28
GCFC2-209ENST00000486016 IMP4Q96G21 291 aaKnown RBP0.81□□□□□ -2.28
GCFC2-209ENST00000486016 CYSTM1Q9H1C7 97 aa0.81□□□□□ -2.28
GCFC2-209ENST00000486016 BAIAP2Q9UQB8 552 aa0.81□□□□□ -2.28
GCFC2-209ENST00000486016 LHFPL6Q9Y693 200 aa0.81□□□□□ -2.28
GCFC2-209ENST00000486016 GREB1Q4ZG55 1949 aa0.81□□□□□ -2.28
GCFC2-209ENST00000486016 ZFHX2Q9C0A1 2572 aaPredicted RBP0.81□□□□□ -2.28
GCFC2-209ENST00000486016 IGKV1D-43A0A0B4J1Z2 117 aa0.8□□□□□ -2.28
GCFC2-209ENST00000486016 SDCBPO00560 298 aaPredicted RBP0.8□□□□□ -2.28
GCFC2-209ENST00000486016 ANGP03950 147 aaKnown RBP0.8□□□□□ -2.28
GCFC2-209ENST00000486016 IFNA16P05015 189 aa0.8□□□□□ -2.28
GCFC2-209ENST00000486016 EIF2B2P49770 351 aaKnown RBP0.8□□□□□ -2.28
GCFC2-209ENST00000486016 SULT1A1P50225 295 aa0.8□□□□□ -2.28
GCFC2-209ENST00000486016 ZNF80P51504 273 aaPredicted RBP0.8□□□□□ -2.28
GCFC2-209ENST00000486016 KISS1Q15726 138 aa0.8□□□□□ -2.28
GCFC2-209ENST00000486016 NDUFA5Q16718 116 aa0.8□□□□□ -2.28
GCFC2-209ENST00000486016 AADACL3Q5VUY0 350 aa0.8□□□□□ -2.28
GCFC2-209ENST00000486016 DHFR2Q86XF0 187 aa0.8□□□□□ -2.28
GCFC2-209ENST00000486016 ZNF439Q8NDP4 499 aa0.8□□□□□ -2.28
GCFC2-209ENST00000486016 MRPL30Q8TCC3 161 aaKnown RBP0.8□□□□□ -2.28
GCFC2-209ENST00000486016 PPP1R2P1Q96PQ5 205 aa0.8□□□□□ -2.28
GCFC2-209ENST00000486016 DERL1Q9BUN8 251 aa0.8□□□□□ -2.28
GCFC2-209ENST00000486016 TP73-AS1Q9UF72 201 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms