RNA–Protein interactions for RNA: ENST00000485955.1

VPS41-213, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-213ENST00000485955 GPR26Q8NDV2 337 aa1.88□□□□□ -2.11
VPS41-213ENST00000485955 OR11H7Q8NGC8 314 aa1.88□□□□□ -2.11
VPS41-213ENST00000485955 OR1N2Q8NGR9 330 aa1.88□□□□□ -2.11
VPS41-213ENST00000485955 JOSD2Q8TAC2 188 aa1.88□□□□□ -2.11
VPS41-213ENST00000485955 C1orf54Q8WWF1 131 aa1.88□□□□□ -2.11
VPS41-213ENST00000485955 GEMIN6Q8WXD5 167 aaKnown RBP1.88□□□□□ -2.11
VPS41-213ENST00000485955 GHSRQ92847 366 aa1.88□□□□□ -2.11
VPS41-213ENST00000485955 GALNT14Q96FL9 552 aa1.88□□□□□ -2.11
VPS41-213ENST00000485955 OR2A7Q96R45 310 aa1.88□□□□□ -2.11
VPS41-213ENST00000485955 VPS25Q9BRG1 176 aa1.88□□□□□ -2.11
VPS41-213ENST00000485955 CCDC32Q9BV29 185 aa1.88□□□□□ -2.11
VPS41-213ENST00000485955 EBPLQ9BY08 206 aa1.88□□□□□ -2.11
VPS41-213ENST00000485955 MAP1LC3BQ9GZQ8 125 aa1.88□□□□□ -2.11
VPS41-213ENST00000485955 SLC25A31Q9H0C2 315 aa1.88□□□□□ -2.11
VPS41-213ENST00000485955 SRMSQ9H3Y6 488 aa1.88□□□□□ -2.11
VPS41-213ENST00000485955 ZSCAN16Q9H4T2 348 aaPredicted RBP1.88□□□□□ -2.11
VPS41-213ENST00000485955 EDA2RQ9HAV5 297 aa1.88□□□□□ -2.11
VPS41-213ENST00000485955 HEBP1Q9NRV9 189 aa1.88□□□□□ -2.11
VPS41-213ENST00000485955 CISHQ9NSE2 258 aa1.88□□□□□ -2.11
VPS41-213ENST00000485955 C14orf105Q9NVL8 296 aa1.88□□□□□ -2.11
VPS41-213ENST00000485955 COPZ2Q9P299 210 aa1.88□□□□□ -2.11
VPS41-213ENST00000485955 RSL24D1Q9UHA3 163 aaKnown RBP1.88□□□□□ -2.11
VPS41-213ENST00000485955 GLS2Q9UI32 602 aa1.88□□□□□ -2.11
VPS41-213ENST00000485955 PSG8Q9UQ74 426 aa1.88□□□□□ -2.11
VPS41-213ENST00000485955 HDGFL3Q9Y3E1 203 aa1.88□□□□□ -2.11
VPS41-213ENST00000485955 ZNF780BQ9Y6R6 833 aa1.88□□□□□ -2.11
VPS41-213ENST00000485955 EPPK1P58107 5090 aaKnown RBP1.88□□□□□ -2.11
VPS41-213ENST00000485955 NBEAL2Q6ZNJ1 2754 aa1.88□□□□□ -2.11
VPS41-213ENST00000485955 CUBNO60494 3623 aa1.88□□□□□ -2.11
VPS41-213ENST00000485955 HYDINQ4G0P3 5121 aa1.88□□□□□ -2.11
VPS41-213ENST00000485955 RP1L1Q8IWN7 2480 aaPredicted RBP1.88□□□□□ -2.11
VPS41-213ENST00000485955 ANKRD36CQ5JPF3 1778 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 SIP14410 1827 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 NUP98P52948 1817 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 SHROOM3Q8TF72 1996 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 TET1Q8NFU7 2136 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 SMIM26A0A096LP01 95 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 FAM236DA0A1B0GTK5 79 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 A0A1W2PRE2 83 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 hADV38S2A0JD32 116 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 PLAC8L1A1L4L8 177 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 ARL5CA6NH57 179 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 OR5H1A6NKK0 313 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 TRAPPC2LH3BP13 241 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 COPEO14579 308 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 EPPINO95925 133 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 IFNA10P01566 189 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 TRBV12-3P01733 135 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 IGHG2P01859 326 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 HBZP02008 142 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 C1QCP02747 245 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 CRYBA1P05813 215 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 BPGMP07738 259 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 CSF3P09919 207 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 CISD3P0C7P0 127 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 OR56A5P0C7T3 313 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 FAM236CP0DP71 79 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 RAB3AP20336 220 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 FLNAP21333 2647 aaKnown RBP1.87□□□□□ -2.11
VPS41-213ENST00000485955 PRTN3P24158 256 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 DDTP30046 118 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 CD70P32970 193 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 MAP2K4P45985 399 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 PSMD8P48556 350 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 SERPINB10P48595 397 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 RAB13P51153 203 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 P2RX1P51575 399 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 CCL23P55773 120 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 TAS2R46P59540 309 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 DNAJB13P59910 316 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 CKS1BP61024 79 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 ELF3P78545 371 aaPredicted RBP1.87□□□□□ -2.11
VPS41-213ENST00000485955 PRR3P79522 188 aaKnown RBP1.87□□□□□ -2.11
VPS41-213ENST00000485955 HPCAP84074 193 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 CACNA1DQ01668 2161 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 LAMTOR4Q0VGL1 99 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 PNOCQ13519 176 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 PAFAH1B3Q15102 231 aaKnown RBP1.87□□□□□ -2.11
VPS41-213ENST00000485955 IAH1Q2TAA2 248 aaPredicted RBP1.87□□□□□ -2.11
VPS41-213ENST00000485955 FBXL19-AS1Q494R0 122 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 FAM201AQ5SY85 155 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 C9orf64Q5T6V5 341 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 TMEM236Q5W0B7 351 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 FBXW9Q5XUX1 488 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 LINC00173Q6ZV60 143 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 LRRC28Q86X40 367 aaPredicted RBP1.87□□□□□ -2.11
VPS41-213ENST00000485955 UMODL1-AS1Q8N2C9 162 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 FAM24BQ8N5W8 94 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 DEFB125Q8N687 156 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 OR10G4Q8NGN3 311 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 OR9Q1Q8NGQ5 310 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 OR2G3Q8NGZ4 309 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 TCEAL3Q969E4 200 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 SLC35G5Q96KT7 338 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 BMFQ96LC9 184 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 OR4K3Q96R72 315 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 OR52B2Q96RD2 323 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 TCEAL7Q9BRU2 100 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 EFCAB11Q9BUY7 163 aa1.87□□□□□ -2.11
VPS41-213ENST00000485955 GGACTQ9BVM4 153 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms