RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 ZNF345Q14585 488 aa11.16□□□□□ -0.62
SMAD9-204ENST00000483941 FAM120AOSQ5T036 256 aa11.16□□□□□ -0.62
SMAD9-204ENST00000483941 RBMS3Q6XE24 437 aaKnown RBP11.16□□□□□ -0.62
SMAD9-204ENST00000483941 RBM14Q96PK6 669 aaKnown RBP11.16□□□□□ -0.62
SMAD9-204ENST00000483941 MFFQ9GZY8 342 aa11.16□□□□□ -0.62
SMAD9-204ENST00000483941 MAGT1Q9H0U3 335 aa11.16□□□□□ -0.62
SMAD9-204ENST00000483941 RBKSQ9H477 322 aa11.16□□□□□ -0.62
SMAD9-204ENST00000483941 ZNF430Q9H8G1 570 aaPredicted RBP11.16□□□□□ -0.62
SMAD9-204ENST00000483941 HEYLQ9NQ87 328 aaPredicted RBP11.16□□□□□ -0.62
SMAD9-204ENST00000483941 TNFSF18Q9UNG2 199 aa11.16□□□□□ -0.62
SMAD9-204ENST00000483941 U3KQ87 197 aa11.16□□□□□ -0.62
SMAD9-204ENST00000483941 INS-IGF2F8WCM5 200 aa11.15□□□□□ -0.62
SMAD9-204ENST00000483941 G3V3Q6 166 aa11.15□□□□□ -0.62
SMAD9-204ENST00000483941 BOLA2-SMG1P6H3BVE0 249 aa11.15□□□□□ -0.62
SMAD9-204ENST00000483941 ARPC5O15511 151 aa11.15□□□□□ -0.62
SMAD9-204ENST00000483941 CNIH1O95406 144 aa11.15□□□□□ -0.62
SMAD9-204ENST00000483941 HOXA1P49639 335 aaPredicted RBP11.15□□□□□ -0.62
SMAD9-204ENST00000483941 COMPP49747 757 aaPredicted RBP11.15□□□□□ -0.62
SMAD9-204ENST00000483941 SUB1P53999 127 aaKnown RBP eCLIP11.15□□□□□ -0.62
SMAD9-204ENST00000483941 BAXQ07812 192 aa11.15□□□□□ -0.62
SMAD9-204ENST00000483941 Q5BKY6 102 aa11.15□□□□□ -0.62
SMAD9-204ENST00000483941 ZNF562Q6V9R5 426 aa11.15□□□□□ -0.62
SMAD9-204ENST00000483941 STX12Q86Y82 276 aa11.15□□□□□ -0.62
SMAD9-204ENST00000483941 OR2C3Q8N628 320 aa11.15□□□□□ -0.62
SMAD9-204ENST00000483941 SSMEM1Q8WWF3 244 aa11.15□□□□□ -0.62
SMAD9-204ENST00000483941 RITA1Q96K30 269 aa11.15□□□□□ -0.62
SMAD9-204ENST00000483941 AQP10Q96PS8 301 aa11.15□□□□□ -0.62
SMAD9-204ENST00000483941 FBXL15Q9H469 300 aa11.15□□□□□ -0.62
SMAD9-204ENST00000483941 PRDM13Q9H4Q3 707 aa11.15□□□□□ -0.62
SMAD9-204ENST00000483941 LYRM2Q9NU23 88 aaPredicted RBP11.15□□□□□ -0.62
SMAD9-204ENST00000483941 PSENENQ9NZ42 101 aa11.15□□□□□ -0.62
SMAD9-204ENST00000483941 TCF19Q9Y242 345 aa11.15□□□□□ -0.62
SMAD9-204ENST00000483941 MOB4Q9Y3A3 225 aa11.15□□□□□ -0.62
SMAD9-204ENST00000483941 MGAM2Q2M2H8 2515 aa11.15□□□□□ -0.62
SMAD9-204ENST00000483941 TRAV3A0A0B4J244 114 aa11.14□□□□□ -0.63
SMAD9-204ENST00000483941 TEX50A0A1B0GTY4 177 aa11.14□□□□□ -0.63
SMAD9-204ENST00000483941 H0YIZ8 118 aa11.14□□□□□ -0.63
SMAD9-204ENST00000483941 TAAR5O14804 337 aa11.14□□□□□ -0.63
SMAD9-204ENST00000483941 CD24P25063 80 aa11.14□□□□□ -0.63
SMAD9-204ENST00000483941 RPL12P30050 165 aaKnown RBP11.14□□□□□ -0.63
SMAD9-204ENST00000483941 RPL27AP46776 148 aaKnown RBP11.14□□□□□ -0.63
SMAD9-204ENST00000483941 CAV2P51636 162 aa11.14□□□□□ -0.63
SMAD9-204ENST00000483941 RAB11AP62491 216 aa11.14□□□□□ -0.63
SMAD9-204ENST00000483941 DEFB112Q30KQ8 113 aa11.14□□□□□ -0.63
SMAD9-204ENST00000483941 TMEM86BQ8N661 226 aa11.14□□□□□ -0.63
SMAD9-204ENST00000483941 OR11H4Q8NGC9 324 aa11.14□□□□□ -0.63
SMAD9-204ENST00000483941 SLC25A33Q9BSK2 321 aa11.14□□□□□ -0.63
SMAD9-204ENST00000483941 HINT2Q9BX68 163 aa11.14□□□□□ -0.63
SMAD9-204ENST00000483941 NDUFA4L2Q9NRX3 87 aa11.14□□□□□ -0.63
SMAD9-204ENST00000483941 PLSCR3Q9NRY6 295 aa11.14□□□□□ -0.63
SMAD9-204ENST00000483941 OR5AC2Q9NZP5 309 aa11.14□□□□□ -0.63
SMAD9-204ENST00000483941 STRAPQ9Y3F4 350 aaKnown RBP11.14□□□□□ -0.63
SMAD9-204ENST00000483941 A6NDX4 124 aa11.13□□□□□ -0.63
SMAD9-204ENST00000483941 H3BUX3 64 aa11.13□□□□□ -0.63
SMAD9-204ENST00000483941 CYB5BO43169 146 aa11.13□□□□□ -0.63
SMAD9-204ENST00000483941 KCNAB3O43448 404 aa11.13□□□□□ -0.63
SMAD9-204ENST00000483941 NXPH3O95157 252 aa11.13□□□□□ -0.63
SMAD9-204ENST00000483941 HLA-DRB1P01911 266 aa11.13□□□□□ -0.63
SMAD9-204ENST00000483941 SNCAP37840 140 aa11.13□□□□□ -0.63
SMAD9-204ENST00000483941 HTR2BP41595 481 aa11.13□□□□□ -0.63
SMAD9-204ENST00000483941 AP2S1P53680 142 aaPredicted RBP11.13□□□□□ -0.63
SMAD9-204ENST00000483941 HBG1P69891 147 aa11.13□□□□□ -0.63
SMAD9-204ENST00000483941 HBG2P69892 147 aa11.13□□□□□ -0.63
SMAD9-204ENST00000483941 TNXAQ16473 311 aa11.13□□□□□ -0.63
SMAD9-204ENST00000483941 C12orf54Q6X4T0 127 aa11.13□□□□□ -0.63
SMAD9-204ENST00000483941 Q6YL49 198 aa11.13□□□□□ -0.63
SMAD9-204ENST00000483941 TMEM68Q96MH6 324 aa11.13□□□□□ -0.63
SMAD9-204ENST00000483941 HSPB11Q9Y547 144 aa11.13□□□□□ -0.63
SMAD9-204ENST00000483941 PKD1L1Q8TDX9 2849 aa11.13□□□□□ -0.63
SMAD9-204ENST00000483941 TRRAPQ9Y4A5 3859 aa11.12□□□□□ -0.63
SMAD9-204ENST00000483941 KANTRA0A1W2PQU2 76 aa11.12□□□□□ -0.63
SMAD9-204ENST00000483941 IFNA10P01566 189 aa11.12□□□□□ -0.63
SMAD9-204ENST00000483941 CNTFRP26992 372 aa11.12□□□□□ -0.63
SMAD9-204ENST00000483941 S100A11P31949 105 aa11.12□□□□□ -0.63
SMAD9-204ENST00000483941 IER3P46695 156 aa11.12□□□□□ -0.63
SMAD9-204ENST00000483941 GNB1P62873 340 aa11.12□□□□□ -0.63
SMAD9-204ENST00000483941 EIF5AP63241 154 aaKnown RBP11.12□□□□□ -0.63
SMAD9-204ENST00000483941 KCNRGQ8N5I3 272 aa11.12□□□□□ -0.63
SMAD9-204ENST00000483941 Q8N9W7 124 aa11.12□□□□□ -0.63
SMAD9-204ENST00000483941 OR1L6Q8NGR2 347 aa11.12□□□□□ -0.63
SMAD9-204ENST00000483941 PIFOQ8TCI5 191 aa11.12□□□□□ -0.63
SMAD9-204ENST00000483941 TCF21O43680 179 aa11.11□□□□□ -0.63
SMAD9-204ENST00000483941 CA2P00918 260 aa11.11□□□□□ -0.63
SMAD9-204ENST00000483941 HKR1P10072 659 aa11.11□□□□□ -0.63
SMAD9-204ENST00000483941 IAPPP10997 89 aa11.11□□□□□ -0.63
SMAD9-204ENST00000483941 PAX6P26367 422 aa11.11□□□□□ -0.63
SMAD9-204ENST00000483941 VDAC2P45880 294 aaPredicted RBP11.11□□□□□ -0.63
SMAD9-204ENST00000483941 SULT1A1P50225 295 aa11.11□□□□□ -0.63
SMAD9-204ENST00000483941 FXYD3Q14802 87 aa11.11□□□□□ -0.63
SMAD9-204ENST00000483941 SPANXN5Q5MJ07 72 aa11.11□□□□□ -0.63
SMAD9-204ENST00000483941 BCL6BQ8N143 479 aaPredicted RBP11.11□□□□□ -0.63
SMAD9-204ENST00000483941 C9orf62Q8N4C0 152 aa11.11□□□□□ -0.63
SMAD9-204ENST00000483941 TMEM252Q8N6L7 170 aa11.11□□□□□ -0.63
SMAD9-204ENST00000483941 GRPEL2Q8TAA5 225 aa11.11□□□□□ -0.63
SMAD9-204ENST00000483941 PINX1Q96BK5 328 aaKnown RBP11.11□□□□□ -0.63
SMAD9-204ENST00000483941 ARL6Q9H0F7 186 aa11.11□□□□□ -0.63
SMAD9-204ENST00000483941 C11orf1Q9H5F2 150 aa11.11□□□□□ -0.63
SMAD9-204ENST00000483941 DFFBO76075 338 aa11.1□□□□□ -0.63
SMAD9-204ENST00000483941 OR8U8P0C7N1 319 aa11.1□□□□□ -0.63
SMAD9-204ENST00000483941 PAX9P55771 341 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms