RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 LGALS9CQ6DKI2 356 aa2.85□□□□□ -1.95
PTCD3-214ENST00000483925 SLC25A34Q6PIV7 304 aa2.85□□□□□ -1.95
PTCD3-214ENST00000483925 Q6ZQT7 251 aa2.85□□□□□ -1.95
PTCD3-214ENST00000483925 ZNF433Q8N7K0 673 aaPredicted RBP2.85□□□□□ -1.95
PTCD3-214ENST00000483925 OR4D11Q8NGI4 311 aa2.85□□□□□ -1.95
PTCD3-214ENST00000483925 OR10D4PQ8NGN7 298 aa2.85□□□□□ -1.95
PTCD3-214ENST00000483925 RNASE11Q8TAA1 199 aaKnown RBP2.85□□□□□ -1.95
PTCD3-214ENST00000483925 H1FXQ92522 213 aaKnown RBP2.85□□□□□ -1.95
PTCD3-214ENST00000483925 UBE2WQ96B02 151 aa2.85□□□□□ -1.95
PTCD3-214ENST00000483925 MGLLQ99685 303 aa2.85□□□□□ -1.95
PTCD3-214ENST00000483925 KRTAP4-3Q9BYR4 195 aa2.85□□□□□ -1.95
PTCD3-214ENST00000483925 C11orf1Q9H5F2 150 aa2.85□□□□□ -1.95
PTCD3-214ENST00000483925 PAIP2BQ9ULR5 123 aaKnown RBP2.85□□□□□ -1.95
PTCD3-214ENST00000483925 FUT9Q9Y231 359 aa2.85□□□□□ -1.95
PTCD3-214ENST00000483925 AMMECR1Q9Y4X0 333 aaPredicted RBP2.85□□□□□ -1.95
PTCD3-214ENST00000483925 PLXNB3Q9ULL4 1909 aa2.84□□□□□ -1.95
PTCD3-214ENST00000483925 PANO1I0J062 215 aa2.84□□□□□ -1.95
PTCD3-214ENST00000483925 J3KT08 172 aa2.84□□□□□ -1.95
PTCD3-214ENST00000483925 PRM2P04554 102 aa2.84□□□□□ -1.95
PTCD3-214ENST00000483925 DBIP07108 87 aaKnown RBP2.84□□□□□ -1.95
PTCD3-214ENST00000483925 ZNF19P17023 458 aa2.84□□□□□ -1.95
PTCD3-214ENST00000483925 GPX2P18283 190 aa2.84□□□□□ -1.95
PTCD3-214ENST00000483925 OGNP20774 298 aaKnown RBP2.84□□□□□ -1.95
PTCD3-214ENST00000483925 AKR1C3P42330 323 aa2.84□□□□□ -1.95
PTCD3-214ENST00000483925 RPS11P62280 158 aaKnown RBP eCLIP2.84□□□□□ -1.95
PTCD3-214ENST00000483925 HIST1H4AP62805 103 aaKnown RBP2.84□□□□□ -1.95
PTCD3-214ENST00000483925 NDPQ00604 133 aa2.84□□□□□ -1.95
PTCD3-214ENST00000483925 AKR1C1Q04828 323 aa2.84□□□□□ -1.95
PTCD3-214ENST00000483925 LTC4SQ16873 150 aa2.84□□□□□ -1.95
PTCD3-214ENST00000483925 RASL11AQ6T310 242 aa2.84□□□□□ -1.95
PTCD3-214ENST00000483925 ZFP2Q6ZN57 461 aa2.84□□□□□ -1.95
PTCD3-214ENST00000483925 C16orf47Q6ZP98 133 aaPredicted RBP2.84□□□□□ -1.95
PTCD3-214ENST00000483925 SH2D6Q7Z4S9 175 aa2.84□□□□□ -1.95
PTCD3-214ENST00000483925 EXOC3-AS1Q8N2X6 119 aa2.84□□□□□ -1.95
PTCD3-214ENST00000483925 RPS4Y2Q8TD47 263 aa2.84□□□□□ -1.95
PTCD3-214ENST00000483925 ADAT3Q96EY9 351 aaPredicted RBP2.84□□□□□ -1.95
PTCD3-214ENST00000483925 CGREF1Q99674 301 aa2.84□□□□□ -1.95
PTCD3-214ENST00000483925 UPK3BQ9BT76 320 aa2.84□□□□□ -1.95
PTCD3-214ENST00000483925 RTL8AQ9BWD3 113 aa2.84□□□□□ -1.95
PTCD3-214ENST00000483925 OR2J1Q9GZK6 312 aa2.84□□□□□ -1.95
PTCD3-214ENST00000483925 TMEM126AQ9H061 195 aa2.84□□□□□ -1.95
PTCD3-214ENST00000483925 RPS10P5Q9NQ39 176 aa2.84□□□□□ -1.95
PTCD3-214ENST00000483925 IL36BQ9NZH7 164 aa2.84□□□□□ -1.95
PTCD3-214ENST00000483925 LAMTOR2Q9Y2Q5 125 aa2.84□□□□□ -1.95
PTCD3-214ENST00000483925 RPRD2Q5VT52 1461 aaKnown RBP2.84□□□□□ -1.96
PTCD3-214ENST00000483925 BAZ1BQ9UIG0 1483 aaKnown RBP2.84□□□□□ -1.96
PTCD3-214ENST00000483925 A0A0B4J2C4 111 aa2.83□□□□□ -1.96
PTCD3-214ENST00000483925 A0A1B0GX51 115 aa2.83□□□□□ -1.96
PTCD3-214ENST00000483925 C17orf51A8MQB3 221 aa2.83□□□□□ -1.96
PTCD3-214ENST00000483925 IGKV1-5P01602 117 aa2.83□□□□□ -1.96
PTCD3-214ENST00000483925 C1QAP02745 245 aa2.83□□□□□ -1.96
PTCD3-214ENST00000483925 CRHBPP24387 322 aa2.83□□□□□ -1.96
PTCD3-214ENST00000483925 S100A4P26447 101 aaKnown RBP2.83□□□□□ -1.96
PTCD3-214ENST00000483925 CD200P41217 278 aa2.83□□□□□ -1.96
PTCD3-214ENST00000483925 FXYD7P58549 80 aa2.83□□□□□ -1.96
PTCD3-214ENST00000483925 DSCR10P59022 87 aa2.83□□□□□ -1.96
PTCD3-214ENST00000483925 TAS2R30P59541 319 aa2.83□□□□□ -1.96
PTCD3-214ENST00000483925 AADACL3Q5VUY0 350 aa2.83□□□□□ -1.96
PTCD3-214ENST00000483925 AGTRAPQ6RW13 159 aa2.83□□□□□ -1.96
PTCD3-214ENST00000483925 LCA10Q71F78 164 aa2.83□□□□□ -1.96
PTCD3-214ENST00000483925 ADM2Q7Z4H4 148 aa2.83□□□□□ -1.96
PTCD3-214ENST00000483925 SPATA12Q7Z6I5 190 aa2.83□□□□□ -1.96
PTCD3-214ENST00000483925 KTN1-AS1Q86SY8 53 aa2.83□□□□□ -1.96
PTCD3-214ENST00000483925 TMEM86AQ8N2M4 240 aa2.83□□□□□ -1.96
PTCD3-214ENST00000483925 C10orf126Q8N4M7 172 aa2.83□□□□□ -1.96
PTCD3-214ENST00000483925 ST20-AS1Q8NBB2 130 aa2.83□□□□□ -1.96
PTCD3-214ENST00000483925 ISOC1Q96CN7 298 aa2.83□□□□□ -1.96
PTCD3-214ENST00000483925 PFDN5Q99471 154 aa2.83□□□□□ -1.96
PTCD3-214ENST00000483925 VCXQ9H320 206 aa2.83□□□□□ -1.96
PTCD3-214ENST00000483925 OR5V1Q9UGF6 321 aa2.83□□□□□ -1.96
PTCD3-214ENST00000483925 MCTS1Q9ULC4 181 aaKnown RBP2.83□□□□□ -1.96
PTCD3-214ENST00000483925 PTPRJQ12913 1337 aa2.83□□□□□ -1.96
PTCD3-214ENST00000483925 BAZ2AQ9UIF9 1905 aaKnown RBP2.83□□□□□ -1.96
PTCD3-214ENST00000483925 IGKV1OR2-108A0A075B7D4 117 aa2.82□□□□□ -1.96
PTCD3-214ENST00000483925 TRAV41A0A0B4J266 112 aa2.82□□□□□ -1.96
PTCD3-214ENST00000483925 BPGMP07738 259 aa2.82□□□□□ -1.96
PTCD3-214ENST00000483925 ZNF286BP0CG31 522 aa2.82□□□□□ -1.96
PTCD3-214ENST00000483925 CCL3P10147 92 aa2.82□□□□□ -1.96
PTCD3-214ENST00000483925 LPAR6P43657 344 aa2.82□□□□□ -1.96
PTCD3-214ENST00000483925 RBM11P57052 281 aaKnown RBP2.82□□□□□ -1.96
PTCD3-214ENST00000483925 CKS1BP61024 79 aa2.82□□□□□ -1.96
PTCD3-214ENST00000483925 ZNF616Q08AN1 781 aa2.82□□□□□ -1.96
PTCD3-214ENST00000483925 OR8B8Q15620 311 aa2.82□□□□□ -1.96
PTCD3-214ENST00000483925 SPANXN3Q5MJ09 141 aa2.82□□□□□ -1.96
PTCD3-214ENST00000483925 LDLRAD2Q5SZI1 272 aa2.82□□□□□ -1.96
PTCD3-214ENST00000483925 SDIM1Q6ZPB5 146 aa2.82□□□□□ -1.96
PTCD3-214ENST00000483925 PACRGLQ8N7B6 248 aa2.82□□□□□ -1.96
PTCD3-214ENST00000483925 OR5A1Q8NGJ0 315 aa2.82□□□□□ -1.96
PTCD3-214ENST00000483925 TM2D3Q9BRN9 247 aa2.82□□□□□ -1.96
PTCD3-214ENST00000483925 DERL1Q9BUN8 251 aa2.82□□□□□ -1.96
PTCD3-214ENST00000483925 SMDT1Q9H4I9 107 aa2.82□□□□□ -1.96
PTCD3-214ENST00000483925 TUBA4BQ9H853 241 aa2.82□□□□□ -1.96
PTCD3-214ENST00000483925 SLC39A9Q9NUM3 307 aa2.82□□□□□ -1.96
PTCD3-214ENST00000483925 COPZ2Q9P299 210 aa2.82□□□□□ -1.96
PTCD3-214ENST00000483925 CKLFQ9UBR5 152 aa2.82□□□□□ -1.96
PTCD3-214ENST00000483925 NUBP2Q9Y5Y2 271 aa2.82□□□□□ -1.96
PTCD3-214ENST00000483925 U3KQK5 164 aa2.82□□□□□ -1.96
PTCD3-214ENST00000483925 CRB1P82279 1406 aa2.82□□□□□ -1.96
PTCD3-214ENST00000483925 LRP4O75096 1905 aa2.81□□□□□ -1.96
PTCD3-214ENST00000483925 TRAV36DV7A0A075B6V5 113 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms