RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 MYL12BO14950 172 aa6.98□□□□□ -1.29
GPNMB-211ENST00000479625 CDK1P06493 297 aa6.98□□□□□ -1.29
GPNMB-211ENST00000479625 GIG44P09565 113 aaPredicted RBP6.98□□□□□ -1.29
GPNMB-211ENST00000479625 HLA-GP17693 338 aa6.98□□□□□ -1.29
GPNMB-211ENST00000479625 C4BPBP20851 252 aa6.98□□□□□ -1.29
GPNMB-211ENST00000479625 PTBP1P26599 531 aaKnown RBP eCLIP6.98□□□□□ -1.29
GPNMB-211ENST00000479625 MAS1LP35410 378 aa6.98□□□□□ -1.29
GPNMB-211ENST00000479625 OR2B8PP59922 312 aa6.98□□□□□ -1.29
GPNMB-211ENST00000479625 RPL8P62917 257 aaKnown RBP6.98□□□□□ -1.29
GPNMB-211ENST00000479625 HSD17B12Q53GQ0 312 aa6.98□□□□□ -1.29
GPNMB-211ENST00000479625 UBE2DNLQ8IWF7 75 aa6.98□□□□□ -1.29
GPNMB-211ENST00000479625 FAM24BQ8N5W8 94 aa6.98□□□□□ -1.29
GPNMB-211ENST00000479625 UBAC2Q8NBM4 344 aa6.98□□□□□ -1.29
GPNMB-211ENST00000479625 OR10W1Q8NGF6 305 aa6.98□□□□□ -1.29
GPNMB-211ENST00000479625 OR4S2Q8NH73 311 aa6.98□□□□□ -1.29
GPNMB-211ENST00000479625 TCTEX1D2Q8WW35 142 aa6.98□□□□□ -1.29
GPNMB-211ENST00000479625 BSCL2Q96G97 398 aaPredicted RBP6.98□□□□□ -1.29
GPNMB-211ENST00000479625 NDUFAF3Q9BU61 184 aa6.98□□□□□ -1.29
GPNMB-211ENST00000479625 RHPN1-AS1Q9BWJ2 59 aa6.98□□□□□ -1.29
GPNMB-211ENST00000479625 SCRT2Q9NQ03 307 aa6.98□□□□□ -1.29
GPNMB-211ENST00000479625 SMPXQ9UHP9 88 aa6.98□□□□□ -1.29
GPNMB-211ENST00000479625 SPATA2Q9UM82 520 aa6.98□□□□□ -1.29
GPNMB-211ENST00000479625 RBMX2Q9Y388 322 aaKnown RBP6.98□□□□□ -1.29
GPNMB-211ENST00000479625 PRELID3BQ9Y3B1 194 aa6.98□□□□□ -1.29
GPNMB-211ENST00000479625 X6R8D5 127 aa6.98□□□□□ -1.29
GPNMB-211ENST00000479625 TRAV3A0A0B4J244 114 aa6.97□□□□□ -1.29
GPNMB-211ENST00000479625 IGKV1D-13A0A0B4J2D9 117 aa6.97□□□□□ -1.29
GPNMB-211ENST00000479625 IGHV7-4-1A0A0J9YVY3 117 aa6.97□□□□□ -1.29
GPNMB-211ENST00000479625 EFCAB10A6NFE3 127 aa6.97□□□□□ -1.29
GPNMB-211ENST00000479625 CHEK1O14757 476 aa6.97□□□□□ -1.29
GPNMB-211ENST00000479625 ATP8B1O43520 1251 aa6.97□□□□□ -1.29
GPNMB-211ENST00000479625 MRPS14O60783 128 aaKnown RBP6.97□□□□□ -1.29
GPNMB-211ENST00000479625 IFNA10P01566 189 aa6.97□□□□□ -1.29
GPNMB-211ENST00000479625 CD1AP06126 327 aa6.97□□□□□ -1.29
GPNMB-211ENST00000479625 IGKV1-13P0DP09 117 aa6.97□□□□□ -1.29
GPNMB-211ENST00000479625 CD37P11049 281 aa6.97□□□□□ -1.29
GPNMB-211ENST00000479625 MIFP14174 115 aa6.97□□□□□ -1.29
GPNMB-211ENST00000479625 GNB3P16520 340 aa6.97□□□□□ -1.29
GPNMB-211ENST00000479625 WNT4P56705 351 aa6.97□□□□□ -1.29
GPNMB-211ENST00000479625 DEFB131AP59861 70 aa6.97□□□□□ -1.29
GPNMB-211ENST00000479625 MRPS15P82914 257 aaKnown RBP6.97□□□□□ -1.29
GPNMB-211ENST00000479625 ST3GAL4Q11206 333 aa6.97□□□□□ -1.29
GPNMB-211ENST00000479625 IRF3Q14653 427 aa6.97□□□□□ -1.29
GPNMB-211ENST00000479625 C12orf74Q32Q52 190 aa6.97□□□□□ -1.29
GPNMB-211ENST00000479625 TIMM50Q3ZCQ8 353 aa6.97□□□□□ -1.29
GPNMB-211ENST00000479625 OR56B1Q8NGI3 324 aa6.97□□□□□ -1.29
GPNMB-211ENST00000479625 GIMAP1Q8WWP7 306 aa6.97□□□□□ -1.29
GPNMB-211ENST00000479625 C9orf16Q9BUW7 83 aa6.97□□□□□ -1.29
GPNMB-211ENST00000479625 CLEC5AQ9NY25 188 aa6.97□□□□□ -1.29
GPNMB-211ENST00000479625 TAS2R8Q9NYW2 309 aa6.97□□□□□ -1.29
GPNMB-211ENST00000479625 TMEM272A0A1B0GTI8 110 aa6.96□□□□□ -1.3
GPNMB-211ENST00000479625 C15orf62A8K5M9 175 aa6.96□□□□□ -1.3
GPNMB-211ENST00000479625 ZNF705EA8MWA4 302 aaPredicted RBP6.96□□□□□ -1.3
GPNMB-211ENST00000479625 K7EMT4 169 aa6.96□□□□□ -1.3
GPNMB-211ENST00000479625 MFNGO00587 321 aa6.96□□□□□ -1.3
GPNMB-211ENST00000479625 SLC17A2O00624 439 aa6.96□□□□□ -1.3
GPNMB-211ENST00000479625 CIB2O75838 187 aa6.96□□□□□ -1.3
GPNMB-211ENST00000479625 DIRAS3O95661 229 aa6.96□□□□□ -1.3
GPNMB-211ENST00000479625 CD74P04233 296 aa6.96□□□□□ -1.3
GPNMB-211ENST00000479625 CD36P16671 472 aa6.96□□□□□ -1.3
GPNMB-211ENST00000479625 NFYAP23511 347 aaPredicted RBP6.96□□□□□ -1.3
GPNMB-211ENST00000479625 LINC00310P59036 64 aa6.96□□□□□ -1.3
GPNMB-211ENST00000479625 EIF4EBP1Q13541 118 aaPredicted RBP6.96□□□□□ -1.3
GPNMB-211ENST00000479625 SOHLH1Q5JUK2 328 aa6.96□□□□□ -1.3
GPNMB-211ENST00000479625 C1orf134Q5TEV5 83 aa6.96□□□□□ -1.3
GPNMB-211ENST00000479625 FAM90A2PQ658T7 463 aa6.96□□□□□ -1.3
GPNMB-211ENST00000479625 TMEM116Q8NCL8 245 aa6.96□□□□□ -1.3
GPNMB-211ENST00000479625 VN1R17PQ8TDU5 208 aa6.96□□□□□ -1.3
GPNMB-211ENST00000479625 RAB3CQ96E17 227 aa6.96□□□□□ -1.3
GPNMB-211ENST00000479625 ELF5Q9UKW6 265 aaPredicted RBP6.96□□□□□ -1.3
GPNMB-211ENST00000479625 AK6Q9Y3D8 172 aaKnown RBP6.96□□□□□ -1.3
GPNMB-211ENST00000479625 UBR4Q5T4S7 5183 aa6.95□□□□□ -1.3
GPNMB-211ENST00000479625 NUPL2O15504 423 aaKnown RBP6.95□□□□□ -1.3
GPNMB-211ENST00000479625 DENRO43583 198 aaKnown RBP6.95□□□□□ -1.3
GPNMB-211ENST00000479625 UCHL1P09936 223 aa6.95□□□□□ -1.3
GPNMB-211ENST00000479625 RAB11BQ15907 218 aa6.95□□□□□ -1.3
GPNMB-211ENST00000479625 Q56UQ5 140 aa6.95□□□□□ -1.3
GPNMB-211ENST00000479625 SPSB3Q6PJ21 355 aa6.95□□□□□ -1.3
GPNMB-211ENST00000479625 AHSA2Q719I0 299 aa6.95□□□□□ -1.3
GPNMB-211ENST00000479625 TCF24Q7RTU0 167 aa6.95□□□□□ -1.3
GPNMB-211ENST00000479625 TRPT1Q86TN4 253 aaKnown RBP6.95□□□□□ -1.3
GPNMB-211ENST00000479625 STHQ8IWL8 128 aa6.95□□□□□ -1.3
GPNMB-211ENST00000479625 CENPSQ8N2Z9 138 aa6.95□□□□□ -1.3
GPNMB-211ENST00000479625 GDPD1Q8N9F7 314 aa6.95□□□□□ -1.3
GPNMB-211ENST00000479625 ZNF555Q8NEP9 628 aa6.95□□□□□ -1.3
GPNMB-211ENST00000479625 SCARB1Q8WTV0 552 aa6.95□□□□□ -1.3
GPNMB-211ENST00000479625 HRASLSQ9HDD0 168 aa6.95□□□□□ -1.3
GPNMB-211ENST00000479625 BET1LQ9NYM9 111 aa6.95□□□□□ -1.3
GPNMB-211ENST00000479625 C21orf62Q9NYP8 219 aa6.95□□□□□ -1.3
GPNMB-211ENST00000479625 THYN1Q9P016 225 aa6.95□□□□□ -1.3
GPNMB-211ENST00000479625 IGHV3-66A0A0C4DH42 116 aa6.94□□□□□ -1.3
GPNMB-211ENST00000479625 TNFSF12O43508 249 aa6.94□□□□□ -1.3
GPNMB-211ENST00000479625 HRASP01112 189 aa6.94□□□□□ -1.3
GPNMB-211ENST00000479625 HLA-DQB1P01920 261 aa6.94□□□□□ -1.3
GPNMB-211ENST00000479625 APOHP02749 345 aaPredicted RBP6.94□□□□□ -1.3
GPNMB-211ENST00000479625 CMC4P56277 68 aaPredicted RBP6.94□□□□□ -1.3
GPNMB-211ENST00000479625 WT1-ASQ06250 92 aa6.94□□□□□ -1.3
GPNMB-211ENST00000479625 C2orf76Q3KRA6 126 aa6.94□□□□□ -1.3
GPNMB-211ENST00000479625 HES5Q5TA89 166 aa6.94□□□□□ -1.3
GPNMB-211ENST00000479625 LAIR2Q6ISS4 152 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms