RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 DBX1A6NMT0 343 aa13.05□□□□□ -0.32
ECHDC1-216ENST00000479525 LGALS9O00182 355 aa13.05□□□□□ -0.32
ECHDC1-216ENST00000479525 ZNF207O43670 478 aaKnown RBP13.05□□□□□ -0.32
ECHDC1-216ENST00000479525 DHFRP00374 187 aa13.05□□□□□ -0.32
ECHDC1-216ENST00000479525 HIST1H1BP16401 226 aaKnown RBP13.05□□□□□ -0.32
ECHDC1-216ENST00000479525 MSMO1Q15800 293 aa13.05□□□□□ -0.32
ECHDC1-216ENST00000479525 POU2AF1Q16633 256 aa13.05□□□□□ -0.32
ECHDC1-216ENST00000479525 ZNF585BQ52M93 769 aa13.05□□□□□ -0.32
ECHDC1-216ENST00000479525 ZNF57Q68EA5 555 aaPredicted RBP13.05□□□□□ -0.32
ECHDC1-216ENST00000479525 SLC25A24Q6NUK1 477 aa13.05□□□□□ -0.32
ECHDC1-216ENST00000479525 LINC00322Q6ZN03 302 aaPredicted RBP13.05□□□□□ -0.32
ECHDC1-216ENST00000479525 LYSMD2Q8IV50 215 aa13.05□□□□□ -0.32
ECHDC1-216ENST00000479525 ZNF502Q8TBZ5 544 aa13.05□□□□□ -0.32
ECHDC1-216ENST00000479525 QTRT1Q9BXR0 403 aaKnown RBP13.05□□□□□ -0.32
ECHDC1-216ENST00000479525 PLEKHA2Q9HB19 425 aa13.05□□□□□ -0.32
ECHDC1-216ENST00000479525 A0A087WXM4 84 aa13.04□□□□□ -0.32
ECHDC1-216ENST00000479525 MARCH11A6NNE9 402 aa13.04□□□□□ -0.32
ECHDC1-216ENST00000479525 PRSS3P35030 304 aa13.04□□□□□ -0.32
ECHDC1-216ENST00000479525 ERVK-16P61578 105 aa13.04□□□□□ -0.32
ECHDC1-216ENST00000479525 FAM106AQ4KMX7 169 aa13.04□□□□□ -0.32
ECHDC1-216ENST00000479525 FAM209BQ5JX69 171 aa13.04□□□□□ -0.32
ECHDC1-216ENST00000479525 NAA50Q9GZZ1 169 aaKnown RBP13.04□□□□□ -0.32
ECHDC1-216ENST00000479525 UBQLN2Q9UHD9 624 aa13.04□□□□□ -0.32
ECHDC1-216ENST00000479525 HPGDSO60760 199 aa13.03□□□□□ -0.32
ECHDC1-216ENST00000479525 IFNA6P05013 189 aa13.03□□□□□ -0.32
ECHDC1-216ENST00000479525 TRAPPC2P0DI81 140 aa13.03□□□□□ -0.32
ECHDC1-216ENST00000479525 TRAPPC2BP0DI82 140 aa13.03□□□□□ -0.32
ECHDC1-216ENST00000479525 F2RP25116 425 aa13.03□□□□□ -0.32
ECHDC1-216ENST00000479525 PLET1Q6UQ28 207 aa13.03□□□□□ -0.32
ECHDC1-216ENST00000479525 DHRS11Q6UWP2 260 aa13.03□□□□□ -0.32
ECHDC1-216ENST00000479525 UBAC2Q8NBM4 344 aa13.03□□□□□ -0.32
ECHDC1-216ENST00000479525 OR52B4Q8NGK2 314 aa13.03□□□□□ -0.32
ECHDC1-216ENST00000479525 FUNDC2Q9BWH2 189 aa13.03□□□□□ -0.32
ECHDC1-216ENST00000479525 OR51B2Q9Y5P1 312 aa13.03□□□□□ -0.32
ECHDC1-216ENST00000479525 TRBV7-1A0A0A6YYK4 115 aa13.02□□□□□ -0.33
ECHDC1-216ENST00000479525 M0QYG6 137 aa13.02□□□□□ -0.33
ECHDC1-216ENST00000479525 NAT1P18440 290 aa13.02□□□□□ -0.33
ECHDC1-216ENST00000479525 GDPD1Q8N9F7 314 aa13.02□□□□□ -0.33
ECHDC1-216ENST00000479525 SLC25A46Q96AG3 418 aa13.02□□□□□ -0.33
ECHDC1-216ENST00000479525 DGCR14Q96DF8 476 aaKnown RBP13.02□□□□□ -0.33
ECHDC1-216ENST00000479525 CXorf58Q96LI9 332 aa13.02□□□□□ -0.33
ECHDC1-216ENST00000479525 AIFM2Q9BRQ8 373 aa13.02□□□□□ -0.33
ECHDC1-216ENST00000479525 CHRDL1Q9BU40 450 aa13.02□□□□□ -0.33
ECHDC1-216ENST00000479525 TECRQ9NZ01 308 aaKnown RBP13.02□□□□□ -0.33
ECHDC1-216ENST00000479525 COMMD9Q9P000 198 aa13.02□□□□□ -0.33
ECHDC1-216ENST00000479525 LCE6AA0A183 80 aa13.01□□□□□ -0.33
ECHDC1-216ENST00000479525 A8MWP6 167 aa13.01□□□□□ -0.33
ECHDC1-216ENST00000479525 GPR31O00270 319 aa13.01□□□□□ -0.33
ECHDC1-216ENST00000479525 TGOLN2O43493 480 aa13.01□□□□□ -0.33
ECHDC1-216ENST00000479525 TNFAIP8O95379 198 aa13.01□□□□□ -0.33
ECHDC1-216ENST00000479525 IGHV3-48P01763 117 aa13.01□□□□□ -0.33
ECHDC1-216ENST00000479525 SERPINE2P07093 398 aa13.01□□□□□ -0.33
ECHDC1-216ENST00000479525 ELK1P19419 428 aa13.01□□□□□ -0.33
ECHDC1-216ENST00000479525 TAS2R46P59540 309 aa13.01□□□□□ -0.33
ECHDC1-216ENST00000479525 TSPAN5P62079 268 aa13.01□□□□□ -0.33
ECHDC1-216ENST00000479525 IZUMO4Q1ZYL8 232 aa13.01□□□□□ -0.33
ECHDC1-216ENST00000479525 KLK9Q2XQG4 91 aa13.01□□□□□ -0.33
ECHDC1-216ENST00000479525 SPINK9Q5DT21 86 aa13.01□□□□□ -0.33
ECHDC1-216ENST00000479525 CROCCP3Q8IVE0 287 aa13.01□□□□□ -0.33
ECHDC1-216ENST00000479525 LAX1Q8IWV1 398 aa13.01□□□□□ -0.33
ECHDC1-216ENST00000479525 OR1L8Q8NGR8 309 aa13.01□□□□□ -0.33
ECHDC1-216ENST00000479525 OR6F1Q8NGZ6 308 aa13.01□□□□□ -0.33
ECHDC1-216ENST00000479525 GPX8Q8TED1 209 aa13.01□□□□□ -0.33
ECHDC1-216ENST00000479525 VCX3AQ9NNX9 186 aa13.01□□□□□ -0.33
ECHDC1-216ENST00000479525 NDUFA4L2Q9NRX3 87 aa13.01□□□□□ -0.33
ECHDC1-216ENST00000479525 KLK9Q9UKQ9 250 aa13.01□□□□□ -0.33
ECHDC1-216ENST00000479525 DNAH1Q9P2D7 4330 aa13.01□□□□□ -0.33
ECHDC1-216ENST00000479525 PLECQ15149 4684 aaKnown RBP13□□□□□ -0.33
ECHDC1-216ENST00000479525 IGKV1-39P01597 117 aa13□□□□□ -0.33
ECHDC1-216ENST00000479525 IGKV1D-39P04432 117 aa13□□□□□ -0.33
ECHDC1-216ENST00000479525 TBC1D26Q86UD7 250 aa13□□□□□ -0.33
ECHDC1-216ENST00000479525 CD300LFQ8TDQ1 290 aa13□□□□□ -0.33
ECHDC1-216ENST00000479525 C20orf24Q9BUV8 137 aa13□□□□□ -0.33
ECHDC1-216ENST00000479525 IGHV3-49A0A0A0MS15 119 aa12.99□□□□□ -0.33
ECHDC1-216ENST00000479525 F8W735 103 aaPredicted RBP12.99□□□□□ -0.33
ECHDC1-216ENST00000479525 PI3P19957 117 aa12.99□□□□□ -0.33
ECHDC1-216ENST00000479525 PTBP1P26599 531 aaKnown RBP eCLIP12.99□□□□□ -0.335e-10■■■■□ 20.2
ECHDC1-216ENST00000479525 SLC16A13Q7RTY0 426 aa12.99□□□□□ -0.33
ECHDC1-216ENST00000479525 F11RQ9Y624 299 aaKnown RBP12.99□□□□□ -0.33
ECHDC1-216ENST00000479525 FAM25AB3EWG3 89 aa12.98□□□□□ -0.33
ECHDC1-216ENST00000479525 FAM25CB3EWG5 89 aa12.98□□□□□ -0.33
ECHDC1-216ENST00000479525 FAM25GB3EWG6 89 aa12.98□□□□□ -0.33
ECHDC1-216ENST00000479525 SNAPC5O75971 98 aa12.98□□□□□ -0.33
ECHDC1-216ENST00000479525 CMTM1Q8IZ96 169 aa12.98□□□□□ -0.33
ECHDC1-216ENST00000479525 SCARB1Q8WTV0 552 aa12.98□□□□□ -0.33
ECHDC1-216ENST00000479525 MRGPRFQ96AM1 343 aa12.98□□□□□ -0.33
ECHDC1-216ENST00000479525 ZNF436Q9C0F3 470 aaPredicted RBP12.98□□□□□ -0.33
ECHDC1-216ENST00000479525 EPPK1P58107 5090 aaKnown RBP12.98□□□□□ -0.33
ECHDC1-216ENST00000479525 K7EIM0 57 aa12.97□□□□□ -0.33
ECHDC1-216ENST00000479525 ADMP35318 185 aa12.97□□□□□ -0.33
ECHDC1-216ENST00000479525 Q56UQ5 140 aa12.97□□□□□ -0.33
ECHDC1-216ENST00000479525 RBPMS2Q6ZRY4 209 aaKnown RBP12.97□□□□□ -0.33
ECHDC1-216ENST00000479525 TMEM190Q8WZ59 177 aa12.97□□□□□ -0.33
ECHDC1-216ENST00000479525 LSM10Q969L4 123 aaKnown RBP12.97□□□□□ -0.33
ECHDC1-216ENST00000479525 MISP3Q96FF7 219 aa12.97□□□□□ -0.33
ECHDC1-216ENST00000479525 ZNF414Q96IQ9 312 aa12.97□□□□□ -0.33
ECHDC1-216ENST00000479525 C21orf62Q9NYP8 219 aa12.97□□□□□ -0.33
ECHDC1-216ENST00000479525 THYN1Q9P016 225 aa12.97□□□□□ -0.33
ECHDC1-216ENST00000479525 TMEM127O75204 238 aa12.96□□□□□ -0.33
ECHDC1-216ENST00000479525 C8orf88P0DMB2 117 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms