RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 UBE2L6O14933 153 aa4.16□□□□□ -1.74
RC3H1-204ENST00000479099 PLA2G10O15496 165 aa4.16□□□□□ -1.74
RC3H1-204ENST00000479099 SOCS1O15524 211 aa4.16□□□□□ -1.74
RC3H1-204ENST00000479099 IGHV3-13P01766 116 aa4.16□□□□□ -1.74
RC3H1-204ENST00000479099 SRP19P09132 144 aaKnown RBP4.16□□□□□ -1.74
RC3H1-204ENST00000479099 CD7P09564 240 aa4.16□□□□□ -1.74
RC3H1-204ENST00000479099 LINC00869P0C866 280 aa4.16□□□□□ -1.74
RC3H1-204ENST00000479099 ZNF705DP0CH99 300 aaPredicted RBP4.16□□□□□ -1.74
RC3H1-204ENST00000479099 LINC00694P0DN24 101 aa4.16□□□□□ -1.74
RC3H1-204ENST00000479099 S100A2P29034 98 aa4.16□□□□□ -1.74
RC3H1-204ENST00000479099 RRN3P1Q2M238 152 aa4.16□□□□□ -1.74
RC3H1-204ENST00000479099 VMA21Q3ZAQ7 101 aa4.16□□□□□ -1.74
RC3H1-204ENST00000479099 CCSMST1Q4G0I0 132 aa4.16□□□□□ -1.74
RC3H1-204ENST00000479099 MORN3Q6PF18 240 aaPredicted RBP4.16□□□□□ -1.74
RC3H1-204ENST00000479099 LCA10Q71F78 164 aa4.16□□□□□ -1.74
RC3H1-204ENST00000479099 ZNF440Q8IYI8 595 aa4.16□□□□□ -1.74
RC3H1-204ENST00000479099 ORMDL3Q8N138 153 aa4.16□□□□□ -1.74
RC3H1-204ENST00000479099 TUBA4BQ9H853 241 aa4.16□□□□□ -1.74
RC3H1-204ENST00000479099 OTORQ9NRC9 128 aa4.16□□□□□ -1.74
RC3H1-204ENST00000479099 MOB4Q9Y3A3 225 aa4.16□□□□□ -1.74
RC3H1-204ENST00000479099 MYH7P12883 1935 aa4.16□□□□□ -1.74
RC3H1-204ENST00000479099 DICER1Q9UPY3 1922 aaKnown RBP4.16□□□□□ -1.74
RC3H1-204ENST00000479099 ARHGAP23Q9P227 1491 aa4.16□□□□□ -1.74
RC3H1-204ENST00000479099 TET2Q6N021 2002 aaPredicted RBP4.16□□□□□ -1.74
RC3H1-204ENST00000479099 LOXHD1Q8IVV2 1947 aa4.15□□□□□ -1.74
RC3H1-204ENST00000479099 ARHGAP31Q2M1Z3 1444 aa4.15□□□□□ -1.74
RC3H1-204ENST00000479099 IGHV3-66A0A0C4DH42 116 aa4.15□□□□□ -1.75
RC3H1-204ENST00000479099 LOC107984640A0A0U1RRK4 108 aa4.15□□□□□ -1.75
RC3H1-204ENST00000479099 LINC00862A6NCI5 91 aa4.15□□□□□ -1.75
RC3H1-204ENST00000479099 ZNF73O43830 326 aaPredicted RBP4.15□□□□□ -1.75
RC3H1-204ENST00000479099 SLC25A14O95258 325 aaPredicted RBP4.15□□□□□ -1.75
RC3H1-204ENST00000479099 MAS1P04201 325 aa4.15□□□□□ -1.75
RC3H1-204ENST00000479099 IGLC6P0CF74 106 aa4.15□□□□□ -1.75
RC3H1-204ENST00000479099 INAFM2P0DMQ5 153 aa4.15□□□□□ -1.75
RC3H1-204ENST00000479099 RBMXP38159 391 aaKnown RBP4.15□□□□□ -1.75
RC3H1-204ENST00000479099 CXCL5P42830 114 aa4.15□□□□□ -1.75
RC3H1-204ENST00000479099 NMUP48645 174 aa4.15□□□□□ -1.75
RC3H1-204ENST00000479099 INSL3P51460 131 aa4.15□□□□□ -1.75
RC3H1-204ENST00000479099 C1orf140Q5VVS0 124 aa4.15□□□□□ -1.75
RC3H1-204ENST00000479099 GLIPR1L1Q6UWM5 242 aa4.15□□□□□ -1.75
RC3H1-204ENST00000479099 TMEM14EPQ6UXP3 125 aa4.15□□□□□ -1.75
RC3H1-204ENST00000479099 SCXQ7RTU7 201 aa4.15□□□□□ -1.75
RC3H1-204ENST00000479099 OR51A4Q8NGJ6 313 aa4.15□□□□□ -1.75
RC3H1-204ENST00000479099 C2orf15Q8WU43 125 aaKnown RBP4.15□□□□□ -1.75
RC3H1-204ENST00000479099 H1FXQ92522 213 aaKnown RBP4.15□□□□□ -1.75
RC3H1-204ENST00000479099 ZNF799Q96GE5 643 aa4.15□□□□□ -1.75
RC3H1-204ENST00000479099 EFCAB1Q9HAE3 211 aa4.15□□□□□ -1.75
RC3H1-204ENST00000479099 ZNF286AQ9HBT8 521 aa4.15□□□□□ -1.75
RC3H1-204ENST00000479099 SCRT2Q9NQ03 307 aa4.15□□□□□ -1.75
RC3H1-204ENST00000479099 CAMSAP2Q08AD1 1489 aa4.15□□□□□ -1.75
RC3H1-204ENST00000479099 TMEM2Q9UHN6 1383 aa4.14□□□□□ -1.75
RC3H1-204ENST00000479099 GRIN2AQ12879 1464 aa4.14□□□□□ -1.75
RC3H1-204ENST00000479099 IGHV3OR15-7A0A075B7D8 119 aa4.14□□□□□ -1.75
RC3H1-204ENST00000479099 IGKV1D-43A0A0B4J1Z2 117 aa4.14□□□□□ -1.75
RC3H1-204ENST00000479099 IGKV1-12A0A0C4DH73 117 aa4.14□□□□□ -1.75
RC3H1-204ENST00000479099 A0A1B0GW54 56 aa4.14□□□□□ -1.75
RC3H1-204ENST00000479099 SRRM5B3KS81 715 aa4.14□□□□□ -1.75
RC3H1-204ENST00000479099 C9JCJ5 164 aa4.14□□□□□ -1.75
RC3H1-204ENST00000479099 RBFOX2O43251 390 aaKnown RBP eCLIP4.14□□□□□ -1.75
RC3H1-204ENST00000479099 LYZL6O75951 148 aa4.14□□□□□ -1.75
RC3H1-204ENST00000479099 NCR2O95944 276 aa4.14□□□□□ -1.75
RC3H1-204ENST00000479099 IGKV1D-12P01611 117 aa4.14□□□□□ -1.75
RC3H1-204ENST00000479099 MT-ND4LP03901 98 aa4.14□□□□□ -1.75
RC3H1-204ENST00000479099 APODP05090 189 aa4.14□□□□□ -1.75
RC3H1-204ENST00000479099 PLA2G2AP14555 144 aa4.14□□□□□ -1.75
RC3H1-204ENST00000479099 NFYBP25208 207 aa4.14□□□□□ -1.75
RC3H1-204ENST00000479099 ZNF80P51504 273 aaPredicted RBP4.14□□□□□ -1.75
RC3H1-204ENST00000479099 ZNF136P52737 540 aa4.14□□□□□ -1.75
RC3H1-204ENST00000479099 ZNF141Q15928 474 aa4.14□□□□□ -1.75
RC3H1-204ENST00000479099 CTAGE3PQ8IX95 158 aa4.14□□□□□ -1.75
RC3H1-204ENST00000479099 H1FOOQ8IZA3 346 aaPredicted RBP4.14□□□□□ -1.75
RC3H1-204ENST00000479099 Q8N7P7 452 aa4.14□□□□□ -1.75
RC3H1-204ENST00000479099 C20orf203Q8NBC4 194 aa4.14□□□□□ -1.75
RC3H1-204ENST00000479099 OR4S1Q8NGB4 309 aa4.14□□□□□ -1.75
RC3H1-204ENST00000479099 SFT2D1Q8WV19 159 aa4.14□□□□□ -1.75
RC3H1-204ENST00000479099 AP1S3Q96PC3 154 aa4.14□□□□□ -1.75
RC3H1-204ENST00000479099 PYGO2Q9BRQ0 406 aa4.14□□□□□ -1.75
RC3H1-204ENST00000479099 NKX6-2Q9C056 277 aaPredicted RBP4.14□□□□□ -1.75
RC3H1-204ENST00000479099 C8orf17Q9NRJ1 99 aa4.14□□□□□ -1.75
RC3H1-204ENST00000479099 SCN3BQ9NY72 215 aa4.14□□□□□ -1.75
RC3H1-204ENST00000479099 TP73-AS1Q9UF72 201 aa4.14□□□□□ -1.75
RC3H1-204ENST00000479099 CHD4Q14839 1912 aa4.14□□□□□ -1.75
RC3H1-204ENST00000479099 PLXND1Q9Y4D7 1925 aa4.14□□□□□ -1.75
RC3H1-204ENST00000479099 CDK5RAP2Q96SN8 1893 aa4.13□□□□□ -1.75
RC3H1-204ENST00000479099 SPATA31E1Q6ZUB1 1445 aa4.13□□□□□ -1.75
RC3H1-204ENST00000479099 OTOFQ9HC10 1997 aa4.13□□□□□ -1.75
RC3H1-204ENST00000479099 TRBV7-6A0A0J9YX20 115 aa4.13□□□□□ -1.75
RC3H1-204ENST00000479099 TMEM212A6NML5 194 aa4.13□□□□□ -1.75
RC3H1-204ENST00000479099 NPFFO15130 113 aa4.13□□□□□ -1.75
RC3H1-204ENST00000479099 SCO1O75880 301 aa4.13□□□□□ -1.75
RC3H1-204ENST00000479099 IGKV1-5P01602 117 aa4.13□□□□□ -1.75
RC3H1-204ENST00000479099 HSPB1P04792 205 aaKnown RBP4.13□□□□□ -1.75
RC3H1-204ENST00000479099 PAEPP09466 180 aa4.13□□□□□ -1.75
RC3H1-204ENST00000479099 HLA-EP13747 358 aa4.13□□□□□ -1.75
RC3H1-204ENST00000479099 TMEM244Q5VVB8 128 aa4.13□□□□□ -1.75
RC3H1-204ENST00000479099 MSRB3Q8IXL7 192 aa4.13□□□□□ -1.75
RC3H1-204ENST00000479099 Q8N377 158 aa4.13□□□□□ -1.75
RC3H1-204ENST00000479099 RPP25LQ8N5L8 163 aaKnown RBP4.13□□□□□ -1.75
RC3H1-204ENST00000479099 OR4A5Q8NH83 315 aa4.13□□□□□ -1.75
RC3H1-204ENST00000479099 MAL2Q969L2 176 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms