RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 OR52E5Q8NH55 327 aa13.87□□□□□ -0.19
SREBF1-211ENST00000476994 SRSF12Q8WXF0 261 aaKnown RBP13.87□□□□□ -0.19
SREBF1-211ENST00000476994 C2orf50Q96LR7 162 aa13.87□□□□□ -0.19
SREBF1-211ENST00000476994 NDUFA4L2Q9NRX3 87 aa13.87□□□□□ -0.19
SREBF1-211ENST00000476994 HSPB7Q9UBY9 170 aa13.87□□□□□ -0.19
SREBF1-211ENST00000476994 ATP6V0E1O15342 81 aa13.86□□□□□ -0.19
SREBF1-211ENST00000476994 RPL27AP46776 148 aaKnown RBP13.86□□□□□ -0.19
SREBF1-211ENST00000476994 HSPE1P61604 102 aaKnown RBP13.86□□□□□ -0.19
SREBF1-211ENST00000476994 ID3Q02535 119 aa13.86□□□□□ -0.19
SREBF1-211ENST00000476994 TMEM95Q3KNT9 176 aa13.86□□□□□ -0.19
SREBF1-211ENST00000476994 CXorf66Q5JRM2 361 aaPredicted RBP13.86□□□□□ -0.19
SREBF1-211ENST00000476994 ASPHD1Q5U4P2 390 aa13.86□□□□□ -0.19
SREBF1-211ENST00000476994 GSG1LQ6UXU4 331 aa13.86□□□□□ -0.19
SREBF1-211ENST00000476994 OR1L8Q8NGR8 309 aa13.86□□□□□ -0.19
SREBF1-211ENST00000476994 CHAC2Q8WUX2 184 aa13.86□□□□□ -0.19
SREBF1-211ENST00000476994 ARPC1AQ92747 370 aa13.86□□□□□ -0.19
SREBF1-211ENST00000476994 PRSS22Q9GZN4 317 aa13.86□□□□□ -0.19
SREBF1-211ENST00000476994 FKBP11Q9NYL4 201 aa13.86□□□□□ -0.19
SREBF1-211ENST00000476994 ZNF580Q9UK33 172 aa13.86□□□□□ -0.19
SREBF1-211ENST00000476994 C13orf42A0A1B0GVH6 325 aa13.85□□□□□ -0.19
SREBF1-211ENST00000476994 IGLC7A0M8Q6 106 aa13.85□□□□□ -0.19
SREBF1-211ENST00000476994 OPN1MWP04001 364 aa13.85□□□□□ -0.19
SREBF1-211ENST00000476994 IGF1P05019 195 aa13.85□□□□□ -0.19
SREBF1-211ENST00000476994 OPN1MW2P0DN77 364 aa13.85□□□□□ -0.19
SREBF1-211ENST00000476994 OPN1MW3P0DN78 364 aa13.85□□□□□ -0.19
SREBF1-211ENST00000476994 KRTAP10-3P60369 221 aa13.85□□□□□ -0.19
SREBF1-211ENST00000476994 GNB1P62873 340 aa13.85□□□□□ -0.19
SREBF1-211ENST00000476994 PRCDQ00LT1 54 aa13.85□□□□□ -0.19
SREBF1-211ENST00000476994 THOC7Q6I9Y2 204 aaKnown RBP13.85□□□□□ -0.19
SREBF1-211ENST00000476994 SLC35E3Q7Z769 313 aa13.85□□□□□ -0.19
SREBF1-211ENST00000476994 OR1S1Q8NH92 325 aa13.85□□□□□ -0.19
SREBF1-211ENST00000476994 FAM103A1Q9BTL3 118 aaKnown RBP13.85□□□□□ -0.19
SREBF1-211ENST00000476994 COMMD5Q9GZQ3 224 aa13.85□□□□□ -0.19
SREBF1-211ENST00000476994 SERTAD4Q9NUC0 356 aa13.85□□□□□ -0.19
SREBF1-211ENST00000476994 C5orf51A6NDU8 294 aa13.84□□□□□ -0.19
SREBF1-211ENST00000476994 HMX3A6NHT5 357 aa13.84□□□□□ -0.19
SREBF1-211ENST00000476994 FAM25EA8MYX2 175 aa13.84□□□□□ -0.19
SREBF1-211ENST00000476994 FAM90A26D6RGX4 464 aa13.84□□□□□ -0.19
SREBF1-211ENST00000476994 SPCS3P61009 180 aa13.84□□□□□ -0.19
SREBF1-211ENST00000476994 TNFRSF9Q07011 255 aa13.84□□□□□ -0.19
SREBF1-211ENST00000476994 C9orf152Q5JTZ5 239 aa13.84□□□□□ -0.19
SREBF1-211ENST00000476994 C11orf87Q6NUJ2 197 aa13.84□□□□□ -0.19
SREBF1-211ENST00000476994 GRPEL2Q8TAA5 225 aa13.84□□□□□ -0.19
SREBF1-211ENST00000476994 FYTTD1Q96QD9 318 aaKnown RBP13.84□□□□□ -0.19
SREBF1-211ENST00000476994 NMES1Q9C002 83 aa13.84□□□□□ -0.19
SREBF1-211ENST00000476994 hCG_2014768A0A024R1R8 64 aa13.83□□□□□ -0.2
SREBF1-211ENST00000476994 INS-IGF2F8WCM5 200 aa13.83□□□□□ -0.2
SREBF1-211ENST00000476994 RBMXL2O75526 392 aaKnown RBP13.83□□□□□ -0.2
SREBF1-211ENST00000476994 ACTL6BO94805 426 aa13.83□□□□□ -0.2
SREBF1-211ENST00000476994 NXPH3O95157 252 aa13.83□□□□□ -0.2
SREBF1-211ENST00000476994 CNIH1O95406 144 aa13.83□□□□□ -0.2
SREBF1-211ENST00000476994 MBPP02686 304 aaPredicted RBP13.83□□□□□ -0.2
SREBF1-211ENST00000476994 TRAPPC2P0DI81 140 aa13.83□□□□□ -0.2
SREBF1-211ENST00000476994 TRAPPC2BP0DI82 140 aa13.83□□□□□ -0.2
SREBF1-211ENST00000476994 VDAC2P45880 294 aaPredicted RBP13.83□□□□□ -0.2
SREBF1-211ENST00000476994 BCAP31P51572 246 aa13.83□□□□□ -0.2
SREBF1-211ENST00000476994 SPINK9Q5DT21 86 aa13.83□□□□□ -0.2
SREBF1-211ENST00000476994 OR10W1Q8NGF6 305 aa13.83□□□□□ -0.2
SREBF1-211ENST00000476994 FAM110DQ8TAY7 271 aaPredicted RBP13.83□□□□□ -0.2
SREBF1-211ENST00000476994 C11orf1Q9H5F2 150 aa13.83□□□□□ -0.2
SREBF1-211ENST00000476994 PARP11Q9NR21 331 aa13.83□□□□□ -0.2
SREBF1-211ENST00000476994 RCL1Q9Y2P8 373 aaKnown RBP13.83□□□□□ -0.2
SREBF1-211ENST00000476994 MSGN1A6NI15 193 aa13.82□□□□□ -0.2
SREBF1-211ENST00000476994 NKX2-1P43699 371 aaPredicted RBP13.82□□□□□ -0.2
SREBF1-211ENST00000476994 CFHR3Q02985 330 aa13.82□□□□□ -0.2
SREBF1-211ENST00000476994 WT1-ASQ06250 92 aa13.82□□□□□ -0.2
SREBF1-211ENST00000476994 NOL4LQ96MY1 436 aaPredicted RBP13.82□□□□□ -0.2
SREBF1-211ENST00000476994 SRSF8Q9BRL6 282 aaKnown RBP13.82□□□□□ -0.2
SREBF1-211ENST00000476994 ZNF436Q9C0F3 470 aaPredicted RBP13.82□□□□□ -0.2
SREBF1-211ENST00000476994 RBKSQ9H477 322 aa13.82□□□□□ -0.2
SREBF1-211ENST00000476994 GSKIPQ9P0R6 139 aa13.82□□□□□ -0.2
SREBF1-211ENST00000476994 G3V318 75 aa13.81□□□□□ -0.2
SREBF1-211ENST00000476994 AP4M1O00189 453 aa13.81□□□□□ -0.2
SREBF1-211ENST00000476994 TSPAN15O95858 294 aa13.81□□□□□ -0.2
SREBF1-211ENST00000476994 IFNA17P01571 189 aa13.81□□□□□ -0.2
SREBF1-211ENST00000476994 AREGP15514 252 aa13.81□□□□□ -0.2
SREBF1-211ENST00000476994 LFNGQ8NES3 379 aa13.81□□□□□ -0.2
SREBF1-211ENST00000476994 OR2T6Q8NHC8 308 aa13.81□□□□□ -0.2
SREBF1-211ENST00000476994 WIPF2Q8TF74 440 aaPredicted RBP13.81□□□□□ -0.2
SREBF1-211ENST00000476994 WNT10AQ9GZT5 417 aa13.81□□□□□ -0.2
SREBF1-211ENST00000476994 CACFD1Q9UGQ2 172 aa13.81□□□□□ -0.2
SREBF1-211ENST00000476994 LINC00527Q9UJ94 153 aa13.81□□□□□ -0.2
SREBF1-211ENST00000476994 CMYA5Q8N3K9 4069 aa13.8□□□□□ -0.2
SREBF1-211ENST00000476994 G3V3Q6 166 aa13.8□□□□□ -0.2
SREBF1-211ENST00000476994 K7EPK0 472 aa13.8□□□□□ -0.2
SREBF1-211ENST00000476994 GIPP09681 153 aaPredicted RBP13.8□□□□□ -0.2
SREBF1-211ENST00000476994 PPIFP30405 207 aaKnown RBP13.8□□□□□ -0.2
SREBF1-211ENST00000476994 POLR2GP62487 172 aaKnown RBP eCLIP13.8□□□□□ -0.2
SREBF1-211ENST00000476994 RAB32Q13637 225 aa13.8□□□□□ -0.2
SREBF1-211ENST00000476994 BSXQ3C1V8 233 aa13.8□□□□□ -0.2
SREBF1-211ENST00000476994 AKIRIN2Q53H80 203 aa13.8□□□□□ -0.2
SREBF1-211ENST00000476994 STPG2Q8N412 459 aa13.8□□□□□ -0.2
SREBF1-211ENST00000476994 OR2C3Q8N628 320 aa13.8□□□□□ -0.2
SREBF1-211ENST00000476994 PDCD10Q9BUL8 212 aa13.8□□□□□ -0.2
SREBF1-211ENST00000476994 MAGT1Q9H0U3 335 aa13.8□□□□□ -0.2
SREBF1-211ENST00000476994 WSB1Q9Y6I7 421 aa13.8□□□□□ -0.2
SREBF1-211ENST00000476994 TRAV41A0A0B4J266 112 aa13.79□□□□□ -0.2
SREBF1-211ENST00000476994 A0A1W2PN81 502 aa13.79□□□□□ -0.2
SREBF1-211ENST00000476994 H0YIZ8 118 aa13.79□□□□□ -0.2
SREBF1-211ENST00000476994 SYNGR2O43760 224 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms