RNA–Protein interactions for RNA: ENST00000475378.5

RNF220-212, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-212ENST00000475378 FAM231CP0DMU5 169 aa12.97□□□□□ -0.33
RNF220-212ENST00000475378 TMEM203Q969S6 136 aa12.97□□□□□ -0.33
RNF220-212ENST00000475378 GPHA2Q96T91 129 aa12.97□□□□□ -0.33
RNF220-212ENST00000475378 RHPN1-AS1Q9BWJ2 59 aa12.97□□□□□ -0.33
RNF220-212ENST00000475378 MND1Q9BWT6 205 aa12.97□□□□□ -0.33
RNF220-212ENST00000475378 TAS2R8Q9NYW2 309 aa12.97□□□□□ -0.33
RNF220-212ENST00000475378 ELF5Q9UKW6 265 aaPredicted RBP12.97□□□□□ -0.33
RNF220-212ENST00000475378 ELOA3CA0A087WX78 387 aaPredicted RBP12.96□□□□□ -0.33
RNF220-212ENST00000475378 TRAV3A0A0B4J244 114 aa12.96□□□□□ -0.33
RNF220-212ENST00000475378 GADD45AP24522 165 aa12.96□□□□□ -0.33
RNF220-212ENST00000475378 ZNF66Q6ZN08 573 aa12.96□□□□□ -0.33
RNF220-212ENST00000475378 GDPD1Q8N9F7 314 aa12.96□□□□□ -0.33
RNF220-212ENST00000475378 OR10W1Q8NGF6 305 aa12.96□□□□□ -0.33
RNF220-212ENST00000475378 C21orf62Q9NYP8 219 aa12.96□□□□□ -0.33
RNF220-212ENST00000475378 IGKV3-7A0A075B6H7 116 aa12.95□□□□□ -0.34
RNF220-212ENST00000475378 GNAO1P09471 354 aa12.95□□□□□ -0.34
RNF220-212ENST00000475378 MIFP14174 115 aa12.95□□□□□ -0.34
RNF220-212ENST00000475378 DTYMKP23919 212 aa12.95□□□□□ -0.34
RNF220-212ENST00000475378 TALDO1P37837 337 aa12.95□□□□□ -0.34
RNF220-212ENST00000475378 SPHARQ15513 63 aa12.95□□□□□ -0.34
RNF220-212ENST00000475378 Q6ZR54 194 aa12.95□□□□□ -0.34
RNF220-212ENST00000475378 TMEM116Q8NCL8 245 aa12.95□□□□□ -0.34
RNF220-212ENST00000475378 BPIFB6Q8NFQ5 453 aa12.95□□□□□ -0.34
RNF220-212ENST00000475378 SCARB1Q8WTV0 552 aa12.95□□□□□ -0.34
RNF220-212ENST00000475378 HRASLSQ9HDD0 168 aa12.95□□□□□ -0.34
RNF220-212ENST00000475378 V9GY05 133 aa12.95□□□□□ -0.34
RNF220-212ENST00000475378 NACAE9PAV3 2078 aa12.94□□□□□ -0.34
RNF220-212ENST00000475378 IGHV3-21A0A0B4J1V1 117 aa12.94□□□□□ -0.34
RNF220-212ENST00000475378 ZNF705EA8MWA4 302 aaPredicted RBP12.94□□□□□ -0.34
RNF220-212ENST00000475378 UPK2O00526 184 aa12.94□□□□□ -0.34
RNF220-212ENST00000475378 SERPINE2P07093 398 aa12.94□□□□□ -0.34
RNF220-212ENST00000475378 CTXN2P0C2S0 81 aa12.94□□□□□ -0.34
RNF220-212ENST00000475378 WT1-ASQ06250 92 aa12.94□□□□□ -0.34
RNF220-212ENST00000475378 POU2AF1Q16633 256 aa12.94□□□□□ -0.34
RNF220-212ENST00000475378 HES5Q5TA89 166 aa12.94□□□□□ -0.34
RNF220-212ENST00000475378 LIPKQ5VXJ0 399 aa12.94□□□□□ -0.34
RNF220-212ENST00000475378 C10orf67Q8IYJ2 551 aa12.94□□□□□ -0.34
RNF220-212ENST00000475378 GBGT1Q8N5D6 347 aa12.94□□□□□ -0.34
RNF220-212ENST00000475378 OR10C1Q96KK4 312 aa12.94□□□□□ -0.34
RNF220-212ENST00000475378 QTRT1Q9BXR0 403 aaKnown RBP12.94□□□□□ -0.34
RNF220-212ENST00000475378 X6R8D5 127 aa12.94□□□□□ -0.34
RNF220-212ENST00000475378 APOBP04114 4563 aaKnown RBP12.94□□□□□ -0.34
RNF220-212ENST00000475378 IGHV3-49A0A0A0MS15 119 aa12.93□□□□□ -0.34
RNF220-212ENST00000475378 K7EIM0 57 aa12.93□□□□□ -0.34
RNF220-212ENST00000475378 CYB5BO43169 146 aa12.93□□□□□ -0.34
RNF220-212ENST00000475378 ARL6IP5O75915 188 aa12.93□□□□□ -0.34
RNF220-212ENST00000475378 CDK2AP2O75956 126 aa12.93□□□□□ -0.34
RNF220-212ENST00000475378 CTSGP08311 255 aa12.93□□□□□ -0.34
RNF220-212ENST00000475378 FGF2P09038 288 aa12.93□□□□□ -0.34
RNF220-212ENST00000475378 RANBP1P43487 201 aa12.93□□□□□ -0.34
RNF220-212ENST00000475378 RPS25P62851 125 aaKnown RBP12.93□□□□□ -0.34
RNF220-212ENST00000475378 LEMD1Q68G75 181 aa12.93□□□□□ -0.34
RNF220-212ENST00000475378 SLC25A24Q6NUK1 477 aa12.93□□□□□ -0.34
RNF220-212ENST00000475378 DHRSXQ8N5I4 330 aa12.93□□□□□ -0.34
RNF220-212ENST00000475378 AIFM2Q9BRQ8 373 aa12.93□□□□□ -0.34
RNF220-212ENST00000475378 SCRT1Q9BWW7 348 aa12.93□□□□□ -0.34
RNF220-212ENST00000475378 COMMD5Q9GZQ3 224 aa12.93□□□□□ -0.34
RNF220-212ENST00000475378 CELA1Q9UNI1 258 aa12.93□□□□□ -0.34
RNF220-212ENST00000475378 DEFB131BA0A096LNP1 70 aa12.92□□□□□ -0.34
RNF220-212ENST00000475378 ERICH4A6NGS2 130 aa12.92□□□□□ -0.34
RNF220-212ENST00000475378 RBFOX2O43251 390 aaKnown RBP eCLIP12.92□□□□□ -0.34
RNF220-212ENST00000475378 OR13C7P0DN81 318 aa12.92□□□□□ -0.34
RNF220-212ENST00000475378 RAB6AP20340 208 aa12.92□□□□□ -0.34
RNF220-212ENST00000475378 CALRP27797 417 aaKnown RBP12.92□□□□□ -0.34
RNF220-212ENST00000475378 DEFB131AP59861 70 aa12.92□□□□□ -0.34
RNF220-212ENST00000475378 C12orf74Q32Q52 190 aa12.92□□□□□ -0.34
RNF220-212ENST00000475378 THOC7Q6I9Y2 204 aaKnown RBP12.92□□□□□ -0.34
RNF220-212ENST00000475378 UFD1Q92890 307 aa12.92□□□□□ -0.34
RNF220-212ENST00000475378 DFFBO76075 338 aa12.91□□□□□ -0.34
RNF220-212ENST00000475378 TAS2R31P59538 309 aa12.91□□□□□ -0.34
RNF220-212ENST00000475378 CNIH2Q6PI25 160 aa12.91□□□□□ -0.34
RNF220-212ENST00000475378 C8orf59Q8N0T1 100 aaPredicted RBP12.91□□□□□ -0.34
RNF220-212ENST00000475378 SPAG16Q8N0X2 631 aa12.91□□□□□ -0.34
RNF220-212ENST00000475378 FAM24BQ8N5W8 94 aa12.91□□□□□ -0.34
RNF220-212ENST00000475378 MAPKAPK5-AS1Q8N8E1 139 aa12.91□□□□□ -0.34
RNF220-212ENST00000475378 UBAC2Q8NBM4 344 aa12.91□□□□□ -0.34
RNF220-212ENST00000475378 DGCR14Q96DF8 476 aaKnown RBP12.91□□□□□ -0.34
RNF220-212ENST00000475378 CMTM3Q96MX0 182 aa12.91□□□□□ -0.34
RNF220-212ENST00000475378 NDUFAF3Q9BU61 184 aa12.91□□□□□ -0.34
RNF220-212ENST00000475378 F11RQ9Y624 299 aaKnown RBP12.91□□□□□ -0.34
RNF220-212ENST00000475378 IGHV3OR16-13A0A075B7E8 117 aa12.9□□□□□ -0.34
RNF220-212ENST00000475378 IGHV3-74A0A0B4J1X5 117 aa12.9□□□□□ -0.34
RNF220-212ENST00000475378 NUPL2O15504 423 aaKnown RBP12.9□□□□□ -0.34
RNF220-212ENST00000475378 TNFSF12O43508 249 aa12.9□□□□□ -0.34
RNF220-212ENST00000475378 CD74P04233 296 aa12.9□□□□□ -0.34
RNF220-212ENST00000475378 Q56UQ5 140 aa12.9□□□□□ -0.34
RNF220-212ENST00000475378 TMEM41BQ5BJD5 291 aa12.9□□□□□ -0.34
RNF220-212ENST00000475378 ZNF773Q6PK81 442 aa12.9□□□□□ -0.34
RNF220-212ENST00000475378 ZNF767PQ75MW2 155 aa12.9□□□□□ -0.34
RNF220-212ENST00000475378 TCF24Q7RTU0 167 aa12.9□□□□□ -0.34
RNF220-212ENST00000475378 HSD17B13Q7Z5P4 300 aaPredicted RBP12.9□□□□□ -0.34
RNF220-212ENST00000475378 DCSTAMPQ9H295 470 aa12.9□□□□□ -0.34
RNF220-212ENST00000475378 TMEM140Q9NV12 185 aa12.9□□□□□ -0.34
RNF220-212ENST00000475378 IGLV2-18A0A075B6J9 118 aa12.89□□□□□ -0.35
RNF220-212ENST00000475378 TEX50A0A1B0GTY4 177 aa12.89□□□□□ -0.35
RNF220-212ENST00000475378 HPRT1P00492 218 aa12.89□□□□□ -0.35
RNF220-212ENST00000475378 TRAPPC2P0DI81 140 aa12.89□□□□□ -0.35
RNF220-212ENST00000475378 TRAPPC2BP0DI82 140 aa12.89□□□□□ -0.35
RNF220-212ENST00000475378 NQO2P16083 231 aa12.89□□□□□ -0.35
RNF220-212ENST00000475378 C4BPBP20851 252 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms