RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 PLGLAQ15195 96 aa11□□□□□ -0.65
TRAF4-210ENST00000475329 ATP6V1FQ16864 119 aa11□□□□□ -0.65
TRAF4-210ENST00000475329 MRGPRG-AS1Q2M3A8 158 aa11□□□□□ -0.65
TRAF4-210ENST00000475329 CLLU1Q5K131 121 aa11□□□□□ -0.65
TRAF4-210ENST00000475329 RUSC1-AS1Q66K80 236 aa11□□□□□ -0.65
TRAF4-210ENST00000475329 PPP1R27Q86WC6 154 aa11□□□□□ -0.65
TRAF4-210ENST00000475329 MRPL41Q8IXM3 137 aaKnown RBP11□□□□□ -0.65
TRAF4-210ENST00000475329 SLC24A4Q8NFF2 622 aa11□□□□□ -0.65
TRAF4-210ENST00000475329 NPBQ8NG41 125 aa11□□□□□ -0.65
TRAF4-210ENST00000475329 OR10P1Q8NGE3 313 aa11□□□□□ -0.65
TRAF4-210ENST00000475329 TMED6Q8WW62 240 aa11□□□□□ -0.65
TRAF4-210ENST00000475329 PINX1Q96BK5 328 aaKnown RBP11□□□□□ -0.65
TRAF4-210ENST00000475329 GINS3Q9BRX5 216 aa11□□□□□ -0.65
TRAF4-210ENST00000475329 FBXL15Q9H469 300 aa11□□□□□ -0.65
TRAF4-210ENST00000475329 ABCA12Q86UK0 2595 aa10.99□□□□□ -0.65
TRAF4-210ENST00000475329 RPS10-NUDT3A0A1W2PQS6 291 aa10.99□□□□□ -0.65
TRAF4-210ENST00000475329 PMS2P5A8MQ11 134 aa10.99□□□□□ -0.65
TRAF4-210ENST00000475329 INS-IGF2F8WCM5 200 aa10.99□□□□□ -0.65
TRAF4-210ENST00000475329 NDUFA3O95167 84 aa10.99□□□□□ -0.65
TRAF4-210ENST00000475329 FAM106CPP0CH98 169 aa10.99□□□□□ -0.65
TRAF4-210ENST00000475329 IGHV4-31P0DP07 118 aa10.99□□□□□ -0.65
TRAF4-210ENST00000475329 IGHV4-38-2P0DP08 117 aa10.99□□□□□ -0.65
TRAF4-210ENST00000475329 TMEM11P17152 192 aa10.99□□□□□ -0.65
TRAF4-210ENST00000475329 CD24P25063 80 aa10.99□□□□□ -0.65
TRAF4-210ENST00000475329 NPY1RP25929 384 aa10.99□□□□□ -0.65
TRAF4-210ENST00000475329 RPL27AP46776 148 aaKnown RBP10.99□□□□□ -0.65
TRAF4-210ENST00000475329 ATP5IP56385 69 aaPredicted RBP10.99□□□□□ -0.65
TRAF4-210ENST00000475329 PJVKQ0ZLH3 352 aa10.99□□□□□ -0.65
TRAF4-210ENST00000475329 TNXAQ16473 311 aa10.99□□□□□ -0.65
TRAF4-210ENST00000475329 TMEM249Q2WGJ8 235 aa10.99□□□□□ -0.65
TRAF4-210ENST00000475329 FAM74A1Q5RGS3 127 aa10.99□□□□□ -0.65
TRAF4-210ENST00000475329 C10orf55Q5SWW7 151 aa10.99□□□□□ -0.65
TRAF4-210ENST00000475329 SLC25A24Q6NUK1 477 aa10.99□□□□□ -0.65
TRAF4-210ENST00000475329 Q8N6K4 173 aa10.99□□□□□ -0.65
TRAF4-210ENST00000475329 MAPK1IP1LQ8NDC0 245 aa10.99□□□□□ -0.65
TRAF4-210ENST00000475329 TMEM147Q9BVK8 224 aa10.99□□□□□ -0.65
TRAF4-210ENST00000475329 SLC25A32Q9H2D1 315 aa10.99□□□□□ -0.65
TRAF4-210ENST00000475329 POLQO75417 2590 aa10.99□□□□□ -0.65
TRAF4-210ENST00000475329 PRRC2AP48634 2157 aaKnown RBP10.99□□□□□ -0.65
TRAF4-210ENST00000475329 CENPEQ02224 2701 aa10.98□□□□□ -0.65
TRAF4-210ENST00000475329 APCP25054 2843 aa10.98□□□□□ -0.65
TRAF4-210ENST00000475329 CA2P00918 260 aa10.98□□□□□ -0.65
TRAF4-210ENST00000475329 TGFAP01135 160 aa10.98□□□□□ -0.65
TRAF4-210ENST00000475329 COMPP49747 757 aaPredicted RBP10.98□□□□□ -0.65
TRAF4-210ENST00000475329 ERHP84090 104 aaKnown RBP10.98□□□□□ -0.65
TRAF4-210ENST00000475329 BRD3OSQ6XYD6 125 aa10.98□□□□□ -0.65
TRAF4-210ENST00000475329 ETV3LQ6ZN32 361 aa10.98□□□□□ -0.65
TRAF4-210ENST00000475329 HSD17B11Q8NBQ5 300 aa10.98□□□□□ -0.65
TRAF4-210ENST00000475329 LRRC20Q8TCA0 184 aa10.98□□□□□ -0.65
TRAF4-210ENST00000475329 PARD6GQ9BYG4 376 aaPredicted RBP10.98□□□□□ -0.65
TRAF4-210ENST00000475329 PLXNB1O43157 2135 aa10.97□□□□□ -0.65
TRAF4-210ENST00000475329 UBE2L5PA0A1B0GUS4 154 aa10.97□□□□□ -0.65
TRAF4-210ENST00000475329 CGB1A6NKQ9 187 aa10.97□□□□□ -0.65
TRAF4-210ENST00000475329 FBXO24O75426 580 aa10.97□□□□□ -0.65
TRAF4-210ENST00000475329 IFNA4P05014 189 aa10.97□□□□□ -0.65
TRAF4-210ENST00000475329 SEC11BP0C7V7 166 aa10.97□□□□□ -0.65
TRAF4-210ENST00000475329 SPP1P10451 314 aa10.97□□□□□ -0.65
TRAF4-210ENST00000475329 GNB1P62873 340 aa10.97□□□□□ -0.65
TRAF4-210ENST00000475329 C5orf64Q2M2E5 130 aa10.97□□□□□ -0.65
TRAF4-210ENST00000475329 C2orf83Q53S99 150 aa10.97□□□□□ -0.65
TRAF4-210ENST00000475329 OR10W1Q8NGF6 305 aa10.97□□□□□ -0.65
TRAF4-210ENST00000475329 SCGB1C1Q8TD33 95 aa10.97□□□□□ -0.65
TRAF4-210ENST00000475329 TMEM170AQ8WVE7 144 aa10.97□□□□□ -0.65
TRAF4-210ENST00000475329 GNPNAT1Q96EK6 184 aaPredicted RBP10.97□□□□□ -0.65
TRAF4-210ENST00000475329 UQCC1Q9NVA1 299 aa10.97□□□□□ -0.65
TRAF4-210ENST00000475329 A0A0U1RQK1 487 aa10.96□□□□□ -0.65
TRAF4-210ENST00000475329 NMBP08949 121 aa10.96□□□□□ -0.65
TRAF4-210ENST00000475329 RNASE2P10153 161 aaKnown RBP10.96□□□□□ -0.65
TRAF4-210ENST00000475329 ATP6V0CP27449 155 aa10.96□□□□□ -0.65
TRAF4-210ENST00000475329 SNCAP37840 140 aa10.96□□□□□ -0.65
TRAF4-210ENST00000475329 DLK1P80370 383 aa10.96□□□□□ -0.65
TRAF4-210ENST00000475329 VWC2Q2TAL6 325 aa10.96□□□□□ -0.65
TRAF4-210ENST00000475329 BSXQ3C1V8 233 aa10.96□□□□□ -0.65
TRAF4-210ENST00000475329 FBLN7Q53RD9 439 aa10.96□□□□□ -0.65
TRAF4-210ENST00000475329 KLF17Q5JT82 389 aaPredicted RBP10.96□□□□□ -0.65
TRAF4-210ENST00000475329 FAM120AOSQ5T036 256 aa10.96□□□□□ -0.65
TRAF4-210ENST00000475329 RNF141Q8WVD5 230 aa10.96□□□□□ -0.65
TRAF4-210ENST00000475329 PCNPQ8WW12 178 aaKnown RBP10.96□□□□□ -0.65
TRAF4-210ENST00000475329 FOXC2Q99958 501 aa10.96□□□□□ -0.65
TRAF4-210ENST00000475329 GGACTQ9BVM4 153 aa10.96□□□□□ -0.65
TRAF4-210ENST00000475329 SH3BGRL3Q9H299 93 aa10.96□□□□□ -0.65
TRAF4-210ENST00000475329 C1RLQ9NZP8 487 aa10.96□□□□□ -0.65
TRAF4-210ENST00000475329 FAM96BQ9Y3D0 163 aa10.96□□□□□ -0.65
TRAF4-210ENST00000475329 A0A1B0GW64 132 aa10.95□□□□□ -0.66
TRAF4-210ENST00000475329 IGLC7A0M8Q6 106 aa10.95□□□□□ -0.66
TRAF4-210ENST00000475329 NCBP2LA6PVI3 153 aaKnown RBP10.95□□□□□ -0.66
TRAF4-210ENST00000475329 PRSS46E5RG02 174 aa10.95□□□□□ -0.66
TRAF4-210ENST00000475329 E7EUB6 86 aa10.95□□□□□ -0.66
TRAF4-210ENST00000475329 AVPP01185 164 aa10.95□□□□□ -0.66
TRAF4-210ENST00000475329 SULT1A2P50226 295 aa10.95□□□□□ -0.66
TRAF4-210ENST00000475329 SUB1P53999 127 aaKnown RBP eCLIP10.95□□□□□ -0.66
TRAF4-210ENST00000475329 BPIFB3P59826 476 aa10.95□□□□□ -0.66
TRAF4-210ENST00000475329 RUNX1Q01196 453 aa10.95□□□□□ -0.66
TRAF4-210ENST00000475329 LRRC75BQ2VPJ9 315 aa10.95□□□□□ -0.66
TRAF4-210ENST00000475329 CYB5R2Q6BCY4 276 aa10.95□□□□□ -0.66
TRAF4-210ENST00000475329 HSD17B13Q7Z5P4 300 aaPredicted RBP10.95□□□□□ -0.66
TRAF4-210ENST00000475329 SRSF12Q8WXF0 261 aaKnown RBP10.95□□□□□ -0.66
TRAF4-210ENST00000475329 SRSF8Q9BRL6 282 aaKnown RBP10.95□□□□□ -0.66
TRAF4-210ENST00000475329 WDR61Q9GZS3 305 aaKnown RBP10.95□□□□□ -0.66
TRAF4-210ENST00000475329 MEGF9Q9H1U4 602 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms