RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 SPSB3Q6PJ21 355 aa13.19□□□□□ -0.3
PCGF3-209ENST00000475288 SPAG16Q8N0X2 631 aa13.19□□□□□ -0.3
PCGF3-209ENST00000475288 GALNT14Q96FL9 552 aa13.19□□□□□ -0.3
PCGF3-209ENST00000475288 BSCL2Q96G97 398 aaPredicted RBP13.19□□□□□ -0.3
PCGF3-209ENST00000475288 COMMD5Q9GZQ3 224 aa13.19□□□□□ -0.3
PCGF3-209ENST00000475288 NDUFA13Q9P0J0 144 aa13.19□□□□□ -0.3
PCGF3-209ENST00000475288 DNAH6Q9C0G6 4158 aa13.18□□□□□ -0.3
PCGF3-209ENST00000475288 OR4C46A6NHA9 309 aa13.18□□□□□ -0.3
PCGF3-209ENST00000475288 K7EMT4 169 aa13.18□□□□□ -0.3
PCGF3-209ENST00000475288 UPK2O00526 184 aa13.18□□□□□ -0.3
PCGF3-209ENST00000475288 RPP25LQ8N5L8 163 aaKnown RBP13.18□□□□□ -0.3
PCGF3-209ENST00000475288 GDPD1Q8N9F7 314 aa13.18□□□□□ -0.3
PCGF3-209ENST00000475288 CD300LFQ8TDQ1 290 aa13.18□□□□□ -0.3
PCGF3-209ENST00000475288 GPHA2Q96T91 129 aa13.18□□□□□ -0.3
PCGF3-209ENST00000475288 QTRT1Q9BXR0 403 aaKnown RBP13.18□□□□□ -0.3
PCGF3-209ENST00000475288 MAP6D1Q9H9H5 199 aa13.18□□□□□ -0.3
PCGF3-209ENST00000475288 UBQLN2Q9UHD9 624 aa13.18□□□□□ -0.3
PCGF3-209ENST00000475288 VPS13DQ5THJ4 4388 aa13.18□□□□□ -0.3
PCGF3-209ENST00000475288 SMIM31A0A1B0GVY4 71 aa13.17□□□□□ -0.3
PCGF3-209ENST00000475288 NDUFA4O00483 81 aa13.17□□□□□ -0.3
PCGF3-209ENST00000475288 PSMB9P28065 219 aa13.17□□□□□ -0.3
PCGF3-209ENST00000475288 FGF9P31371 208 aaPredicted RBP13.17□□□□□ -0.3
PCGF3-209ENST00000475288 CATR1Q13166 79 aa13.17□□□□□ -0.3
PCGF3-209ENST00000475288 C22orf42Q6IC83 251 aa13.17□□□□□ -0.3
PCGF3-209ENST00000475288 GPR141Q7Z602 305 aa13.17□□□□□ -0.3
PCGF3-209ENST00000475288 PHLDA1Q8WV24 401 aaPredicted RBP13.17□□□□□ -0.3
PCGF3-209ENST00000475288 SECTM1Q8WVN6 248 aa13.17□□□□□ -0.3
PCGF3-209ENST00000475288 PLEKHA2Q9HB19 425 aa13.17□□□□□ -0.3
PCGF3-209ENST00000475288 CCL28Q9NRJ3 127 aa13.17□□□□□ -0.3
PCGF3-209ENST00000475288 IGHV3-35A0A0C4DH35 117 aa13.16□□□□□ -0.3
PCGF3-209ENST00000475288 PPYP01298 95 aa13.16□□□□□ -0.3
PCGF3-209ENST00000475288 FCGR2CP31995 323 aa13.16□□□□□ -0.3
PCGF3-209ENST00000475288 SCAND1P57086 179 aa13.16□□□□□ -0.3
PCGF3-209ENST00000475288 TPRA1Q86W33 373 aa13.16□□□□□ -0.3
PCGF3-209ENST00000475288 CADM3Q8N126 398 aa13.16□□□□□ -0.3
PCGF3-209ENST00000475288 BEST4Q8NFU0 473 aa13.16□□□□□ -0.3
PCGF3-209ENST00000475288 GATAD1Q8WUU5 269 aa13.16□□□□□ -0.3
PCGF3-209ENST00000475288 YIPF6Q96EC8 236 aa13.16□□□□□ -0.3
PCGF3-209ENST00000475288 BCL7BQ9BQE9 202 aa13.16□□□□□ -0.3
PCGF3-209ENST00000475288 TRAV3A0A0B4J244 114 aa13.15□□□□□ -0.3
PCGF3-209ENST00000475288 A6NHS1 94 aa13.15□□□□□ -0.3
PCGF3-209ENST00000475288 ZNF701M0R085 212 aaPredicted RBP13.15□□□□□ -0.3
PCGF3-209ENST00000475288 SULT1C2O00338 296 aa13.15□□□□□ -0.3
PCGF3-209ENST00000475288 TNFSF12O43508 249 aa13.15□□□□□ -0.3
PCGF3-209ENST00000475288 SERPINE2P07093 398 aa13.15□□□□□ -0.3
PCGF3-209ENST00000475288 CMC4P56277 68 aaPredicted RBP13.15□□□□□ -0.3
PCGF3-209ENST00000475288 ARPC4P59998 168 aa13.15□□□□□ -0.3
PCGF3-209ENST00000475288 C6orf62Q9GZU0 229 aaPredicted RBP13.15□□□□□ -0.3
PCGF3-209ENST00000475288 RBM38Q9H0Z9 239 aaKnown RBP13.15□□□□□ -0.3
PCGF3-209ENST00000475288 TMEM140Q9NV12 185 aa13.15□□□□□ -0.3
PCGF3-209ENST00000475288 COMMD9Q9P000 198 aa13.15□□□□□ -0.3
PCGF3-209ENST00000475288 A0A0A6YYH2 397 aa13.14□□□□□ -0.31
PCGF3-209ENST00000475288 OR2T8A6NH00 312 aa13.14□□□□□ -0.31
PCGF3-209ENST00000475288 A6NJ64 397 aa13.14□□□□□ -0.31
PCGF3-209ENST00000475288 C15orf62A8K5M9 175 aa13.14□□□□□ -0.31
PCGF3-209ENST00000475288 S1PR2O95136 353 aa13.14□□□□□ -0.31
PCGF3-209ENST00000475288 TRAPPC2P0DI81 140 aa13.14□□□□□ -0.31
PCGF3-209ENST00000475288 TRAPPC2BP0DI82 140 aa13.14□□□□□ -0.31
PCGF3-209ENST00000475288 WT1-ASQ06250 92 aa13.14□□□□□ -0.31
PCGF3-209ENST00000475288 HOGA1Q86XE5 327 aa13.14□□□□□ -0.31
PCGF3-209ENST00000475288 OR10W1Q8NGF6 305 aa13.14□□□□□ -0.31
PCGF3-209ENST00000475288 SLC5A7Q9GZV3 580 aa13.14□□□□□ -0.31
PCGF3-209ENST00000475288 C11orf68Q9H3H3 251 aaKnown RBP13.14□□□□□ -0.31
PCGF3-209ENST00000475288 RHBDL2Q9NX52 303 aa13.14□□□□□ -0.31
PCGF3-209ENST00000475288 F8W735 103 aaPredicted RBP13.13□□□□□ -0.31
PCGF3-209ENST00000475288 DEDDO75618 318 aa13.13□□□□□ -0.31
PCGF3-209ENST00000475288 OR13C7P0DN81 318 aa13.13□□□□□ -0.31
PCGF3-209ENST00000475288 RPL35AP18077 110 aaKnown RBP13.13□□□□□ -0.31
PCGF3-209ENST00000475288 TCTAP57738 103 aa13.13□□□□□ -0.31
PCGF3-209ENST00000475288 DMBX1Q8NFW5 382 aa13.13□□□□□ -0.31
PCGF3-209ENST00000475288 OR1L8Q8NGR8 309 aa13.13□□□□□ -0.31
PCGF3-209ENST00000475288 LGALS14Q8TCE9 139 aa13.13□□□□□ -0.31
PCGF3-209ENST00000475288 BORCS5Q969J3 196 aa13.13□□□□□ -0.31
PCGF3-209ENST00000475288 MFFQ9GZY8 342 aa13.13□□□□□ -0.31
PCGF3-209ENST00000475288 NDUFA4L2Q9NRX3 87 aa13.13□□□□□ -0.31
PCGF3-209ENST00000475288 TXNL4BQ9NX01 149 aaKnown RBP13.13□□□□□ -0.31
PCGF3-209ENST00000475288 C21orf62Q9NYP8 219 aa13.13□□□□□ -0.31
PCGF3-209ENST00000475288 DAPK2Q9UIK4 370 aa13.13□□□□□ -0.31
PCGF3-209ENST00000475288 F11RQ9Y624 299 aaKnown RBP13.13□□□□□ -0.31
PCGF3-209ENST00000475288 TEX50A0A1B0GTY4 177 aa13.12□□□□□ -0.31
PCGF3-209ENST00000475288 SMIM30A4D0T7 59 aa13.12□□□□□ -0.31
PCGF3-209ENST00000475288 GABARAPO95166 117 aa13.12□□□□□ -0.31
PCGF3-209ENST00000475288 CTSDP07339 412 aaPredicted RBP13.12□□□□□ -0.31
PCGF3-209ENST00000475288 ADMP35318 185 aa13.12□□□□□ -0.31
PCGF3-209ENST00000475288 TMBIM6P55061 237 aa13.12□□□□□ -0.31
PCGF3-209ENST00000475288 SLC25A24Q6NUK1 477 aa13.12□□□□□ -0.31
PCGF3-209ENST00000475288 SFXN4Q6P4A7 337 aa13.12□□□□□ -0.31
PCGF3-209ENST00000475288 SCARB1Q8WTV0 552 aa13.12□□□□□ -0.31
PCGF3-209ENST00000475288 GIMAP1Q8WWP7 306 aa13.12□□□□□ -0.31
PCGF3-209ENST00000475288 CHRDL1Q9BU40 450 aa13.12□□□□□ -0.31
PCGF3-209ENST00000475288 FUNDC2Q9BWH2 189 aa13.12□□□□□ -0.31
PCGF3-209ENST00000475288 CSTL1Q9H114 145 aa13.12□□□□□ -0.31
PCGF3-209ENST00000475288 ETV7Q9Y603 341 aa13.12□□□□□ -0.31
PCGF3-209ENST00000475288 RPA2P15927 270 aa13.11□□□□□ -0.31
PCGF3-209ENST00000475288 FCGR2BP31994 310 aaPredicted RBP13.11□□□□□ -0.31
PCGF3-209ENST00000475288 MFAP2P55001 183 aa13.11□□□□□ -0.31
PCGF3-209ENST00000475288 ZNF818PQ6ZRF7 136 aa13.11□□□□□ -0.31
PCGF3-209ENST00000475288 GVQW1Q8N7I0 195 aa13.11□□□□□ -0.31
PCGF3-209ENST00000475288 RAB2BQ8WUD1 216 aa13.11□□□□□ -0.31
PCGF3-209ENST00000475288 LSM10Q969L4 123 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 832.6 ms