RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 NR2C2APQ86WQ0 139 aa9.25□□□□□ -0.93
SKA3-206ENST00000475251 APRG1Q8IVJ8 170 aa9.25□□□□□ -0.93
SKA3-206ENST00000475251 CENPSQ8N2Z9 138 aa9.25□□□□□ -0.93
SKA3-206ENST00000475251 GVQW1Q8N7I0 195 aa9.25□□□□□ -0.93
SKA3-206ENST00000475251 GDPD1Q8N9F7 314 aa9.25□□□□□ -0.93
SKA3-206ENST00000475251 CMTM3Q96MX0 182 aa9.25□□□□□ -0.93
SKA3-206ENST00000475251 QTRT1Q9BXR0 403 aaKnown RBP9.25□□□□□ -0.93
SKA3-206ENST00000475251 VCXQ9H320 206 aa9.25□□□□□ -0.93
SKA3-206ENST00000475251 IGKV1D-13A0A0B4J2D9 117 aa9.24□□□□□ -0.93
SKA3-206ENST00000475251 CGB1A6NKQ9 187 aa9.24□□□□□ -0.93
SKA3-206ENST00000475251 SCGNO76038 276 aa9.24□□□□□ -0.93
SKA3-206ENST00000475251 HPRT1P00492 218 aa9.24□□□□□ -0.93
SKA3-206ENST00000475251 IGKV1-13P0DP09 117 aa9.24□□□□□ -0.93
SKA3-206ENST00000475251 NQO2P16083 231 aa9.24□□□□□ -0.93
SKA3-206ENST00000475251 MYL9P24844 172 aa9.24□□□□□ -0.93
SKA3-206ENST00000475251 BRWD1-AS2P59051 145 aa9.24□□□□□ -0.93
SKA3-206ENST00000475251 FABP5Q01469 135 aa9.24□□□□□ -0.93
SKA3-206ENST00000475251 CATR1Q13166 79 aa9.24□□□□□ -0.93
SKA3-206ENST00000475251 RCN1Q15293 331 aa9.24□□□□□ -0.93
SKA3-206ENST00000475251 HACD4Q5VWC8 232 aa9.24□□□□□ -0.93
SKA3-206ENST00000475251 SPAG16Q8N0X2 631 aa9.24□□□□□ -0.93
SKA3-206ENST00000475251 ZBTB34Q8NCN2 500 aa9.24□□□□□ -0.93
SKA3-206ENST00000475251 ATG5Q9H1Y0 275 aa9.24□□□□□ -0.93
SKA3-206ENST00000475251 HRH4Q9H3N8 390 aa9.24□□□□□ -0.93
SKA3-206ENST00000475251 C21orf62Q9NYP8 219 aa9.24□□□□□ -0.93
SKA3-206ENST00000475251 APLNQ9ULZ1 77 aa9.24□□□□□ -0.93
SKA3-206ENST00000475251 TPRKBQ9Y3C4 175 aa9.24□□□□□ -0.93
SKA3-206ENST00000475251 VPS13DQ5THJ4 4388 aa9.24□□□□□ -0.93
SKA3-206ENST00000475251 TRAV1-2A0A0B4J238 106 aa9.23□□□□□ -0.93
SKA3-206ENST00000475251 UPK2O00526 184 aa9.23□□□□□ -0.93
SKA3-206ENST00000475251 CD5P06127 495 aa9.23□□□□□ -0.93
SKA3-206ENST00000475251 ARPC4P59998 168 aa9.23□□□□□ -0.93
SKA3-206ENST00000475251 PAFAH1B2P68402 229 aa9.23□□□□□ -0.93
SKA3-206ENST00000475251 RELQ04864 619 aaPredicted RBP9.23□□□□□ -0.93
SKA3-206ENST00000475251 TMEM187Q14656 261 aa9.23□□□□□ -0.93
SKA3-206ENST00000475251 POU2AF1Q16633 256 aa9.23□□□□□ -0.93
SKA3-206ENST00000475251 CDNFQ49AH0 187 aa9.23□□□□□ -0.93
SKA3-206ENST00000475251 SLC25A24Q6NUK1 477 aa9.23□□□□□ -0.93
SKA3-206ENST00000475251 SMPXQ9UHP9 88 aa9.23□□□□□ -0.93
SKA3-206ENST00000475251 ANXA10Q9UJ72 324 aa9.23□□□□□ -0.93
SKA3-206ENST00000475251 ETV7Q9Y603 341 aa9.23□□□□□ -0.93
SKA3-206ENST00000475251 DNAH6Q9C0G6 4158 aa9.22□□□□□ -0.93
SKA3-206ENST00000475251 XRCC3O43542 346 aa9.22□□□□□ -0.93
SKA3-206ENST00000475251 CA1P00915 261 aaPredicted RBP9.22□□□□□ -0.93
SKA3-206ENST00000475251 SERPINE2P07093 398 aa9.22□□□□□ -0.93
SKA3-206ENST00000475251 TRAPPC2P0DI81 140 aa9.22□□□□□ -0.93
SKA3-206ENST00000475251 TRAPPC2BP0DI82 140 aa9.22□□□□□ -0.93
SKA3-206ENST00000475251 OR13C7P0DN81 318 aa9.22□□□□□ -0.93
SKA3-206ENST00000475251 GNG2P59768 71 aa9.22□□□□□ -0.93
SKA3-206ENST00000475251 Q56UQ5 140 aa9.22□□□□□ -0.93
SKA3-206ENST00000475251 UBAC2Q8NBM4 344 aa9.22□□□□□ -0.93
SKA3-206ENST00000475251 TMEM116Q8NCL8 245 aa9.22□□□□□ -0.93
SKA3-206ENST00000475251 DMBX1Q8NFW5 382 aa9.22□□□□□ -0.93
SKA3-206ENST00000475251 SECTM1Q8WVN6 248 aa9.22□□□□□ -0.93
SKA3-206ENST00000475251 RNF2Q99496 336 aa9.22□□□□□ -0.93
SKA3-206ENST00000475251 RYR1P21817 5038 aa9.22□□□□□ -0.93
SKA3-206ENST00000475251 IGHV7-4-1A0A0J9YVY3 117 aa9.21□□□□□ -0.94
SKA3-206ENST00000475251 CHEK1O14757 476 aa9.21□□□□□ -0.94
SKA3-206ENST00000475251 CASQ2O14958 399 aaPredicted RBP9.21□□□□□ -0.94
SKA3-206ENST00000475251 NUPL2O15504 423 aaKnown RBP9.21□□□□□ -0.94
SKA3-206ENST00000475251 TNFSF12O43508 249 aa9.21□□□□□ -0.94
SKA3-206ENST00000475251 RGS10O43665 173 aa9.21□□□□□ -0.94
SKA3-206ENST00000475251 ZNF207O43670 478 aaKnown RBP9.21□□□□□ -0.94
SKA3-206ENST00000475251 RAB3BP20337 219 aa9.21□□□□□ -0.94
SKA3-206ENST00000475251 TFPI2P48307 235 aa9.21□□□□□ -0.94
SKA3-206ENST00000475251 OR10A3P58181 314 aa9.21□□□□□ -0.94
SKA3-206ENST00000475251 ERVK-16P61578 105 aa9.21□□□□□ -0.94
SKA3-206ENST00000475251 TMEM41BQ5BJD5 291 aa9.21□□□□□ -0.94
SKA3-206ENST00000475251 OR1L8Q8NGR8 309 aa9.21□□□□□ -0.94
SKA3-206ENST00000475251 SCARB1Q8WTV0 552 aa9.21□□□□□ -0.94
SKA3-206ENST00000475251 LSM10Q969L4 123 aaKnown RBP9.21□□□□□ -0.94
SKA3-206ENST00000475251 MGLLQ99685 303 aa9.21□□□□□ -0.94
SKA3-206ENST00000475251 CHRDL1Q9BU40 450 aa9.21□□□□□ -0.94
SKA3-206ENST00000475251 RHPN1-AS1Q9BWJ2 59 aa9.21□□□□□ -0.94
SKA3-206ENST00000475251 PLEKHA2Q9HB19 425 aa9.21□□□□□ -0.94
SKA3-206ENST00000475251 TMEM140Q9NV12 185 aa9.21□□□□□ -0.94
SKA3-206ENST00000475251 ELF5Q9UKW6 265 aaPredicted RBP9.21□□□□□ -0.94
SKA3-206ENST00000475251 F11RQ9Y624 299 aaKnown RBP9.21□□□□□ -0.94
SKA3-206ENST00000475251 IGHV3OR16-8A0A075B7F1 116 aa9.2□□□□□ -0.94
SKA3-206ENST00000475251 TRAV10A0A0B4J240 114 aa9.2□□□□□ -0.94
SKA3-206ENST00000475251 TMEM235A6NFC5 223 aa9.2□□□□□ -0.94
SKA3-206ENST00000475251 C15orf61A6NNL5 157 aa9.2□□□□□ -0.94
SKA3-206ENST00000475251 SULT1C2O00338 296 aa9.2□□□□□ -0.94
SKA3-206ENST00000475251 DEFB4AO15263 64 aa9.2□□□□□ -0.94
SKA3-206ENST00000475251 DFFBO76075 338 aa9.2□□□□□ -0.94
SKA3-206ENST00000475251 EIF4EP06730 217 aaKnown RBP9.2□□□□□ -0.94
SKA3-206ENST00000475251 ZNF124Q15973 351 aa9.2□□□□□ -0.94
SKA3-206ENST00000475251 OGFRL1Q5TC84 451 aaPredicted RBP9.2□□□□□ -0.94
SKA3-206ENST00000475251 OR10W1Q8NGF6 305 aa9.2□□□□□ -0.94
SKA3-206ENST00000475251 OR13F1Q8NGS4 319 aa9.2□□□□□ -0.94
SKA3-206ENST00000475251 NUDCD2Q8WVJ2 157 aa9.2□□□□□ -0.94
SKA3-206ENST00000475251 BORCS5Q969J3 196 aa9.2□□□□□ -0.94
SKA3-206ENST00000475251 GPHA2Q96T91 129 aa9.2□□□□□ -0.94
SKA3-206ENST00000475251 CCL28Q9NRJ3 127 aa9.2□□□□□ -0.94
SKA3-206ENST00000475251 COMMD9Q9P000 198 aa9.2□□□□□ -0.94
SKA3-206ENST00000475251 TRAV14DV4A0A0A6YYC5 116 aa9.19□□□□□ -0.94
SKA3-206ENST00000475251 TRAV3A0A0B4J244 114 aa9.19□□□□□ -0.94
SKA3-206ENST00000475251 A0A1B0GVY2 172 aa9.19□□□□□ -0.94
SKA3-206ENST00000475251 YIF1AO95070 293 aa9.19□□□□□ -0.94
SKA3-206ENST00000475251 MIFP14174 115 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms