RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 KHDC3LQ587J8 217 aa9.29□□□□□ -0.92
HLA-DOB-208ENST00000475235 LDLRAD2Q5SZI1 272 aa9.29□□□□□ -0.92
HLA-DOB-208ENST00000475235 SLC35E4Q6ICL7 350 aa9.29□□□□□ -0.92
HLA-DOB-208ENST00000475235 LAIR2Q6ISS4 152 aa9.29□□□□□ -0.92
HLA-DOB-208ENST00000475235 OR4C13Q8NGP0 309 aa9.29□□□□□ -0.92
HLA-DOB-208ENST00000475235 PGLYRP3Q96LB9 341 aa9.29□□□□□ -0.92
HLA-DOB-208ENST00000475235 MIEN1Q9BRT3 115 aa9.29□□□□□ -0.92
HLA-DOB-208ENST00000475235 NPFFR1Q9GZQ6 430 aa9.29□□□□□ -0.92
HLA-DOB-208ENST00000475235 OR51J1Q9H342 316 aa9.29□□□□□ -0.92
HLA-DOB-208ENST00000475235 ZFAND3Q9H8U3 227 aa9.29□□□□□ -0.92
HLA-DOB-208ENST00000475235 SLC2A8Q9NY64 477 aa9.29□□□□□ -0.92
HLA-DOB-208ENST00000475235 DOK5Q9P104 306 aa9.29□□□□□ -0.92
HLA-DOB-208ENST00000475235 FBLN5Q9UBX5 448 aa9.29□□□□□ -0.92
HLA-DOB-208ENST00000475235 MCRIP1C9JLW8 97 aa9.28□□□□□ -0.92
HLA-DOB-208ENST00000475235 M0QXV9 152 aa9.28□□□□□ -0.92
HLA-DOB-208ENST00000475235 M0QZ24 198 aa9.28□□□□□ -0.92
HLA-DOB-208ENST00000475235 OR7C2O60412 319 aa9.28□□□□□ -0.92
HLA-DOB-208ENST00000475235 S1PR2O95136 353 aa9.28□□□□□ -0.92
HLA-DOB-208ENST00000475235 IGFBP3P17936 291 aaPredicted RBP9.28□□□□□ -0.92
HLA-DOB-208ENST00000475235 FSTP19883 344 aa9.28□□□□□ -0.92
HLA-DOB-208ENST00000475235 CDK2P24941 298 aa9.28□□□□□ -0.92
HLA-DOB-208ENST00000475235 PSMA1P25786 263 aaKnown RBP9.28□□□□□ -0.92
HLA-DOB-208ENST00000475235 HTR1DP28221 377 aa9.28□□□□□ -0.92
HLA-DOB-208ENST00000475235 KIR2DS4P43632 304 aa9.28□□□□□ -0.92
HLA-DOB-208ENST00000475235 OR3A4PP47883 348 aa9.28□□□□□ -0.92
HLA-DOB-208ENST00000475235 NPBWR1P48145 328 aa9.28□□□□□ -0.92
HLA-DOB-208ENST00000475235 DYNLT3P51808 116 aa9.28□□□□□ -0.92
HLA-DOB-208ENST00000475235 SUMO1P63165 101 aaKnown RBP9.28□□□□□ -0.92
HLA-DOB-208ENST00000475235 PAX5Q02548 391 aa9.28□□□□□ -0.92
HLA-DOB-208ENST00000475235 ATXN7L3Q14CW9 347 aaPredicted RBP9.28□□□□□ -0.92
HLA-DOB-208ENST00000475235 TMEM69Q5SWH9 247 aa9.28□□□□□ -0.92
HLA-DOB-208ENST00000475235 TREML4Q6UXN2 200 aa9.28□□□□□ -0.92
HLA-DOB-208ENST00000475235 LINC00596Q86U02 117 aa9.28□□□□□ -0.92
HLA-DOB-208ENST00000475235 OR11H7Q8NGC8 314 aa9.28□□□□□ -0.92
HLA-DOB-208ENST00000475235 PIFOQ8TCI5 191 aa9.28□□□□□ -0.92
HLA-DOB-208ENST00000475235 COQ2Q96H96 371 aa9.28□□□□□ -0.92
HLA-DOB-208ENST00000475235 SIGMAR1Q99720 223 aa9.28□□□□□ -0.92
HLA-DOB-208ENST00000475235 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.28□□□□□ -0.92
HLA-DOB-208ENST00000475235 TCF19Q9Y242 345 aa9.28□□□□□ -0.92
HLA-DOB-208ENST00000475235 PRAF2O60831 178 aa9.27□□□□□ -0.93
HLA-DOB-208ENST00000475235 YIF1AO95070 293 aa9.27□□□□□ -0.93
HLA-DOB-208ENST00000475235 MT-ND4P03905 459 aa9.27□□□□□ -0.93
HLA-DOB-208ENST00000475235 CRYGBP07316 175 aa9.27□□□□□ -0.93
HLA-DOB-208ENST00000475235 GIPP09681 153 aaPredicted RBP9.27□□□□□ -0.93
HLA-DOB-208ENST00000475235 CELP19835 753 aa9.27□□□□□ -0.93
HLA-DOB-208ENST00000475235 RPS11P62280 158 aaKnown RBP eCLIP9.27□□□□□ -0.93
HLA-DOB-208ENST00000475235 ZNF585BQ52M93 769 aa9.27□□□□□ -0.93
HLA-DOB-208ENST00000475235 SLC35E3Q7Z769 313 aa9.27□□□□□ -0.93
HLA-DOB-208ENST00000475235 CENPVQ7Z7K6 275 aaPredicted RBP9.27□□□□□ -0.93
HLA-DOB-208ENST00000475235 DYNAPQ8N1N2 210 aa9.27□□□□□ -0.93
HLA-DOB-208ENST00000475235 ABHD12Q8N2K0 398 aa9.27□□□□□ -0.93
HLA-DOB-208ENST00000475235 OSR2Q8N2R0 312 aa9.27□□□□□ -0.93
HLA-DOB-208ENST00000475235 ZFP41Q8N8Y5 198 aa9.27□□□□□ -0.93
HLA-DOB-208ENST00000475235 OR2T6Q8NHC8 308 aa9.27□□□□□ -0.93
HLA-DOB-208ENST00000475235 ACOT13Q9NPJ3 140 aa9.27□□□□□ -0.93
HLA-DOB-208ENST00000475235 FOXJ3Q9UPW0 622 aa9.27□□□□□ -0.93
HLA-DOB-208ENST00000475235 COX11Q9Y6N1 276 aa9.27□□□□□ -0.93
HLA-DOB-208ENST00000475235 TRBV5-7A0A0A0MS05 114 aa9.26□□□□□ -0.93
HLA-DOB-208ENST00000475235 TRAV24A0A0B4J272 114 aa9.26□□□□□ -0.93
HLA-DOB-208ENST00000475235 KBTBD11-OT1A0A1B0GTJ5 212 aa9.26□□□□□ -0.93
HLA-DOB-208ENST00000475235 F2RL2O00254 374 aa9.26□□□□□ -0.93
HLA-DOB-208ENST00000475235 HSPB6O14558 160 aa9.26□□□□□ -0.93
HLA-DOB-208ENST00000475235 RBFOX2O43251 390 aaKnown RBP eCLIP9.26□□□□□ -0.93
HLA-DOB-208ENST00000475235 CDRT1O95170 752 aa9.26□□□□□ -0.93
HLA-DOB-208ENST00000475235 PSMB9P28065 219 aa9.26□□□□□ -0.93
HLA-DOB-208ENST00000475235 CD34P28906 385 aa9.26□□□□□ -0.93
HLA-DOB-208ENST00000475235 SLC35A2P78381 396 aa9.26□□□□□ -0.93
HLA-DOB-208ENST00000475235 DOC2BQ14184 412 aa9.26□□□□□ -0.93
HLA-DOB-208ENST00000475235 PRSS8Q16651 343 aa9.26□□□□□ -0.93
HLA-DOB-208ENST00000475235 MPV17LQ2QL34 196 aa9.26□□□□□ -0.93
HLA-DOB-208ENST00000475235 PIGYQ3MUY2 71 aa9.26□□□□□ -0.93
HLA-DOB-208ENST00000475235 TMEM268Q5VZI3 342 aa9.26□□□□□ -0.93
HLA-DOB-208ENST00000475235 NECAP2Q9NVZ3 263 aa9.26□□□□□ -0.93
HLA-DOB-208ENST00000475235 DPM3Q9P2X0 92 aa9.26□□□□□ -0.93
HLA-DOB-208ENST00000475235 HSF4Q9ULV5 492 aa9.26□□□□□ -0.93
HLA-DOB-208ENST00000475235 HILPDAQ9Y5L2 63 aa9.26□□□□□ -0.93
HLA-DOB-208ENST00000475235 A6NDX4 124 aa9.26□□□□□ -0.93
HLA-DOB-208ENST00000475235 ZNF705EA8MWA4 302 aaPredicted RBP9.26□□□□□ -0.93
HLA-DOB-208ENST00000475235 OR7C1O76099 320 aaPredicted RBP9.26□□□□□ -0.93
HLA-DOB-208ENST00000475235 RBM11P57052 281 aaKnown RBP9.26□□□□□ -0.93
HLA-DOB-208ENST00000475235 GGNBP1Q5YKI7 109 aa9.26□□□□□ -0.93
HLA-DOB-208ENST00000475235 PRSS54Q6PEW0 395 aa9.26□□□□□ -0.93
HLA-DOB-208ENST00000475235 OR52E5Q8NH55 327 aa9.26□□□□□ -0.93
HLA-DOB-208ENST00000475235 ARL11Q969Q4 196 aa9.26□□□□□ -0.93
HLA-DOB-208ENST00000475235 DERL3Q96Q80 235 aa9.26□□□□□ -0.93
HLA-DOB-208ENST00000475235 CHST1O43916 411 aa9.25□□□□□ -0.93
HLA-DOB-208ENST00000475235 IGLV1-47P01700 117 aa9.25□□□□□ -0.93
HLA-DOB-208ENST00000475235 MGMTP16455 207 aa9.25□□□□□ -0.93
HLA-DOB-208ENST00000475235 ADCYAP1P18509 176 aa9.25□□□□□ -0.93
HLA-DOB-208ENST00000475235 EFNB2P52799 333 aa9.25□□□□□ -0.93
HLA-DOB-208ENST00000475235 AKR1C2P52895 323 aa9.25□□□□□ -0.93
HLA-DOB-208ENST00000475235 KRTAP10-3P60369 221 aa9.25□□□□□ -0.93
HLA-DOB-208ENST00000475235 LSM3P62310 102 aaKnown RBP9.25□□□□□ -0.93
HLA-DOB-208ENST00000475235 FABP5Q01469 135 aa9.25□□□□□ -0.93
HLA-DOB-208ENST00000475235 GAGE5Q13069 117 aa9.25□□□□□ -0.93
HLA-DOB-208ENST00000475235 GAGE6Q13070 117 aa9.25□□□□□ -0.93
HLA-DOB-208ENST00000475235 C17orf58Q2M2W7 97 aa9.25□□□□□ -0.93
HLA-DOB-208ENST00000475235 ANKRD55Q3KP44 614 aa9.25□□□□□ -0.93
HLA-DOB-208ENST00000475235 FAM78BQ5VT40 261 aa9.25□□□□□ -0.93
HLA-DOB-208ENST00000475235 ZNF660Q6AZW8 331 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms