RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 IFNA7P01567 189 aa8.25□□□□□ -1.09
COL12A1-206ENST00000474564 CRYGBP07316 175 aa8.25□□□□□ -1.09
COL12A1-206ENST00000474564 IL6RP08887 468 aaPredicted RBP8.25□□□□□ -1.09
COL12A1-206ENST00000474564 P0C879 139 aa8.25□□□□□ -1.09
COL12A1-206ENST00000474564 IAPPP10997 89 aa8.25□□□□□ -1.09
COL12A1-206ENST00000474564 CXCL2P19875 107 aa8.25□□□□□ -1.09
COL12A1-206ENST00000474564 CNTFRP26992 372 aa8.25□□□□□ -1.09
COL12A1-206ENST00000474564 P2RY1P47900 373 aa8.25□□□□□ -1.09
COL12A1-206ENST00000474564 TAS2R30P59541 319 aa8.25□□□□□ -1.09
COL12A1-206ENST00000474564 POLR2GP62487 172 aaKnown RBP eCLIP8.25□□□□□ -1.09
COL12A1-206ENST00000474564 RAB11AP62491 216 aa8.25□□□□□ -1.09
COL12A1-206ENST00000474564 IZUMO4Q1ZYL8 232 aa8.25□□□□□ -1.09
COL12A1-206ENST00000474564 CXorf66Q5JRM2 361 aaPredicted RBP8.25□□□□□ -1.09
COL12A1-206ENST00000474564 STX12Q86Y82 276 aa8.25□□□□□ -1.09
COL12A1-206ENST00000474564 C5orf56Q8N8D9 126 aa8.25□□□□□ -1.09
COL12A1-206ENST00000474564 Q8N9W7 124 aa8.25□□□□□ -1.09
COL12A1-206ENST00000474564 OR1L6Q8NGR2 347 aa8.25□□□□□ -1.09
COL12A1-206ENST00000474564 PIFOQ8TCI5 191 aa8.25□□□□□ -1.09
COL12A1-206ENST00000474564 DTD1Q8TEA8 209 aa8.25□□□□□ -1.09
COL12A1-206ENST00000474564 ARPC1AQ92747 370 aa8.25□□□□□ -1.09
COL12A1-206ENST00000474564 GSX1Q9H4S2 264 aaPredicted RBP8.25□□□□□ -1.09
COL12A1-206ENST00000474564 SOX21Q9Y651 276 aaPredicted RBP8.25□□□□□ -1.09
COL12A1-206ENST00000474564 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.25□□□□□ -1.09
COL12A1-206ENST00000474564 MED13LQ71F56 2210 aa8.24□□□□□ -1.09
COL12A1-206ENST00000474564 CLDN34H7C241 214 aa8.24□□□□□ -1.09
COL12A1-206ENST00000474564 CHST1O43916 411 aa8.24□□□□□ -1.09
COL12A1-206ENST00000474564 IFNA10P01566 189 aa8.24□□□□□ -1.09
COL12A1-206ENST00000474564 OPN1MWP04001 364 aa8.24□□□□□ -1.09
COL12A1-206ENST00000474564 OPN1MW2P0DN77 364 aa8.24□□□□□ -1.09
COL12A1-206ENST00000474564 OPN1MW3P0DN78 364 aa8.24□□□□□ -1.09
COL12A1-206ENST00000474564 DEFA4P12838 97 aa8.24□□□□□ -1.09
COL12A1-206ENST00000474564 RAB14P61106 215 aa8.24□□□□□ -1.09
COL12A1-206ENST00000474564 CX3CL1P78423 397 aa8.24□□□□□ -1.09
COL12A1-206ENST00000474564 PRCDQ00LT1 54 aa8.24□□□□□ -1.09
COL12A1-206ENST00000474564 AARDQ4LEZ3 155 aa8.24□□□□□ -1.09
COL12A1-206ENST00000474564 SLC25A24Q6NUK1 477 aa8.24□□□□□ -1.09
COL12A1-206ENST00000474564 Q6ZRM9 215 aa8.24□□□□□ -1.09
COL12A1-206ENST00000474564 ZNF767PQ75MW2 155 aa8.24□□□□□ -1.09
COL12A1-206ENST00000474564 SLC35E3Q7Z769 313 aa8.24□□□□□ -1.09
COL12A1-206ENST00000474564 SLC51BQ86UW2 128 aa8.24□□□□□ -1.09
COL12A1-206ENST00000474564 KCNRGQ8N5I3 272 aa8.24□□□□□ -1.09
COL12A1-206ENST00000474564 SRSF12Q8WXF0 261 aaKnown RBP8.24□□□□□ -1.09
COL12A1-206ENST00000474564 SMIM8Q96KF7 97 aa8.24□□□□□ -1.09
COL12A1-206ENST00000474564 ZNF48Q96MX3 618 aaPredicted RBP8.24□□□□□ -1.09
COL12A1-206ENST00000474564 SMIM3Q9BZL3 60 aa8.24□□□□□ -1.09
COL12A1-206ENST00000474564 RBKSQ9H477 322 aa8.24□□□□□ -1.09
COL12A1-206ENST00000474564 PARP11Q9NR21 331 aa8.24□□□□□ -1.09
COL12A1-206ENST00000474564 PSENENQ9NZ42 101 aa8.24□□□□□ -1.09
COL12A1-206ENST00000474564 UBQLN2Q9UHD9 624 aa8.24□□□□□ -1.09
COL12A1-206ENST00000474564 STRAPQ9Y3F4 350 aaKnown RBP8.24□□□□□ -1.09
COL12A1-206ENST00000474564 WSB1Q9Y6I7 421 aa8.24□□□□□ -1.09
COL12A1-206ENST00000474564 U3KQ87 197 aa8.24□□□□□ -1.09
COL12A1-206ENST00000474564 TACC2O95359 2948 aa8.23□□□□□ -1.09
COL12A1-206ENST00000474564 TRAV3A0A0B4J244 114 aa8.23□□□□□ -1.09
COL12A1-206ENST00000474564 MSGN1A6NI15 193 aa8.23□□□□□ -1.09
COL12A1-206ENST00000474564 AP4M1O00189 453 aa8.23□□□□□ -1.09
COL12A1-206ENST00000474564 TAAR5O14804 337 aa8.23□□□□□ -1.09
COL12A1-206ENST00000474564 LYL1P12980 280 aa8.23□□□□□ -1.09
COL12A1-206ENST00000474564 TPT1P13693 172 aaKnown RBP8.23□□□□□ -1.09
COL12A1-206ENST00000474564 HTR2BP41595 481 aa8.23□□□□□ -1.09
COL12A1-206ENST00000474564 PDLIM3Q53GG5 364 aaPredicted RBP8.23□□□□□ -1.09
COL12A1-206ENST00000474564 LAMTOR1Q6IAA8 161 aa8.23□□□□□ -1.09
COL12A1-206ENST00000474564 LILRB2Q8N423 598 aa8.23□□□□□ -1.09
COL12A1-206ENST00000474564 OR2C3Q8N628 320 aa8.23□□□□□ -1.09
COL12A1-206ENST00000474564 AQP10Q96PS8 301 aa8.23□□□□□ -1.09
COL12A1-206ENST00000474564 RNF126Q9BV68 326 aa8.23□□□□□ -1.09
COL12A1-206ENST00000474564 NDUFA4L2Q9NRX3 87 aa8.23□□□□□ -1.09
COL12A1-206ENST00000474564 THYN1Q9P016 225 aa8.23□□□□□ -1.09
COL12A1-206ENST00000474564 BAHCC1Q9P281 2608 aa8.22□□□□□ -1.09
COL12A1-206ENST00000474564 TET2Q6N021 2002 aaPredicted RBP8.22□□□□□ -1.09
COL12A1-206ENST00000474564 ABCA1O95477 2261 aa8.22□□□□□ -1.09
COL12A1-206ENST00000474564 RNF222A6NCQ9 220 aa8.22□□□□□ -1.09
COL12A1-206ENST00000474564 FAM24AA6NFZ4 105 aa8.22□□□□□ -1.09
COL12A1-206ENST00000474564 DNAJC9-AS1A6NH13 148 aa8.22□□□□□ -1.09
COL12A1-206ENST00000474564 H0YIZ8 118 aa8.22□□□□□ -1.09
COL12A1-206ENST00000474564 H3BP45 60 aa8.22□□□□□ -1.09
COL12A1-206ENST00000474564 CORTO00230 105 aa8.22□□□□□ -1.09
COL12A1-206ENST00000474564 FCN1O00602 326 aa8.22□□□□□ -1.09
COL12A1-206ENST00000474564 IFNA4P05014 189 aa8.22□□□□□ -1.09
COL12A1-206ENST00000474564 OR8U8P0C7N1 319 aa8.22□□□□□ -1.09
COL12A1-206ENST00000474564 OR13C7P0DN81 318 aa8.22□□□□□ -1.09
COL12A1-206ENST00000474564 HKR1P10072 659 aa8.22□□□□□ -1.09
COL12A1-206ENST00000474564 HILS1P60008 231 aa8.22□□□□□ -1.09
COL12A1-206ENST00000474564 HBG1P69891 147 aa8.22□□□□□ -1.09
COL12A1-206ENST00000474564 HBG2P69892 147 aa8.22□□□□□ -1.09
COL12A1-206ENST00000474564 SLC35B1P78383 322 aa8.22□□□□□ -1.09
COL12A1-206ENST00000474564 PJVKQ0ZLH3 352 aa8.22□□□□□ -1.09
COL12A1-206ENST00000474564 SPANXN5Q5MJ07 72 aa8.22□□□□□ -1.09
COL12A1-206ENST00000474564 UNQ5815/PRO19632Q6UWF5 114 aa8.22□□□□□ -1.09
COL12A1-206ENST00000474564 OR1S2Q8NGQ3 325 aa8.22□□□□□ -1.09
COL12A1-206ENST00000474564 OR2T6Q8NHC8 308 aa8.22□□□□□ -1.09
COL12A1-206ENST00000474564 CCDC168Q8NDH2 2452 aa8.22□□□□□ -1.09
COL12A1-206ENST00000474564 ABCA2Q9BZC7 2435 aa8.21□□□□□ -1.09
COL12A1-206ENST00000474564 INS-IGF2F8WCM5 200 aa8.21□□□□□ -1.1
COL12A1-206ENST00000474564 IGHG2P01859 326 aa8.21□□□□□ -1.1
COL12A1-206ENST00000474564 RNASE1P07998 156 aaKnown RBP8.21□□□□□ -1.1
COL12A1-206ENST00000474564 HIST1H1BP16401 226 aaKnown RBP8.21□□□□□ -1.1
COL12A1-206ENST00000474564 EWSR1Q01844 656 aaKnown RBP eCLIP8.21□□□□□ -1.1
COL12A1-206ENST00000474564 BAXQ07812 192 aa8.21□□□□□ -1.1
COL12A1-206ENST00000474564 IL15RAQ13261 267 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms