RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 DBX1A6NMT0 343 aa13.96□□□□□ -0.17
COL7A1-209ENST00000474432 GPR31O00270 319 aa13.96□□□□□ -0.17
COL7A1-209ENST00000474432 HPGDSO60760 199 aa13.96□□□□□ -0.17
COL7A1-209ENST00000474432 CD81P60033 236 aa13.96□□□□□ -0.17
COL7A1-209ENST00000474432 DYNLRB2Q8TF09 96 aa13.96□□□□□ -0.17
COL7A1-209ENST00000474432 CXorf58Q96LI9 332 aa13.96□□□□□ -0.17
COL7A1-209ENST00000474432 TECRQ9NZ01 308 aaKnown RBP13.96□□□□□ -0.17
COL7A1-209ENST00000474432 MLXQ9UH92 298 aa13.96□□□□□ -0.17
COL7A1-209ENST00000474432 NSG2Q9Y328 171 aa13.96□□□□□ -0.17
COL7A1-209ENST00000474432 RYR2Q92736 4967 aa13.96□□□□□ -0.18
COL7A1-209ENST00000474432 SACSQ9NZJ4 4579 aa13.95□□□□□ -0.18
COL7A1-209ENST00000474432 RBMY1BA6NDE4 496 aaKnown RBP13.95□□□□□ -0.18
COL7A1-209ENST00000474432 RBMY1EA6NEQ0 496 aaKnown RBP13.95□□□□□ -0.18
COL7A1-209ENST00000474432 KRASP01116 189 aa13.95□□□□□ -0.18
COL7A1-209ENST00000474432 SERPINE2P07093 398 aa13.95□□□□□ -0.18
COL7A1-209ENST00000474432 RBMY1DP0C7P1 496 aaKnown RBP13.95□□□□□ -0.18
COL7A1-209ENST00000474432 TRAPPC2P0DI81 140 aa13.95□□□□□ -0.18
COL7A1-209ENST00000474432 TRAPPC2BP0DI82 140 aa13.95□□□□□ -0.18
COL7A1-209ENST00000474432 OR13C7P0DN81 318 aa13.95□□□□□ -0.18
COL7A1-209ENST00000474432 PTBP1P26599 531 aaKnown RBP eCLIP13.95□□□□□ -0.18
COL7A1-209ENST00000474432 G6PCP35575 357 aa13.95□□□□□ -0.18
COL7A1-209ENST00000474432 CTF1Q16619 201 aa13.95□□□□□ -0.18
COL7A1-209ENST00000474432 SNX29P2Q8IUI4 249 aa13.95□□□□□ -0.18
COL7A1-209ENST00000474432 TMEM61Q8N0U2 210 aa13.95□□□□□ -0.18
COL7A1-209ENST00000474432 DEFB125Q8N687 156 aa13.95□□□□□ -0.18
COL7A1-209ENST00000474432 GDPD1Q8N9F7 314 aa13.95□□□□□ -0.18
COL7A1-209ENST00000474432 SPATA25Q9BR10 227 aa13.95□□□□□ -0.18
COL7A1-209ENST00000474432 TUBA4BQ9H853 241 aa13.95□□□□□ -0.18
COL7A1-209ENST00000474432 SCPEP1Q9HB40 452 aa13.95□□□□□ -0.18
COL7A1-209ENST00000474432 IGKV1-39P01597 117 aa13.94□□□□□ -0.18
COL7A1-209ENST00000474432 IGKV1D-39P04432 117 aa13.94□□□□□ -0.18
COL7A1-209ENST00000474432 C8orf88P0DMB2 117 aa13.94□□□□□ -0.18
COL7A1-209ENST00000474432 GPR183P32249 361 aa13.94□□□□□ -0.18
COL7A1-209ENST00000474432 FAM106AQ4KMX7 169 aa13.94□□□□□ -0.18
COL7A1-209ENST00000474432 PHLDA2Q53GA4 152 aa13.94□□□□□ -0.18
COL7A1-209ENST00000474432 TM4SF20Q53R12 229 aa13.94□□□□□ -0.18
COL7A1-209ENST00000474432 THOC7Q6I9Y2 204 aaKnown RBP13.94□□□□□ -0.18
COL7A1-209ENST00000474432 CMTM1Q8IZ96 169 aa13.94□□□□□ -0.18
COL7A1-209ENST00000474432 UXS1Q8NBZ7 420 aa13.94□□□□□ -0.18
COL7A1-209ENST00000474432 OR1L8Q8NGR8 309 aa13.94□□□□□ -0.18
COL7A1-209ENST00000474432 ZNF414Q96IQ9 312 aa13.94□□□□□ -0.18
COL7A1-209ENST00000474432 ZNF320A2RRD8 509 aa13.93□□□□□ -0.18
COL7A1-209ENST00000474432 F8W735 103 aaPredicted RBP13.93□□□□□ -0.18
COL7A1-209ENST00000474432 ERVK-16P61578 105 aa13.93□□□□□ -0.18
COL7A1-209ENST00000474432 VN1R17PQ8TDU5 208 aa13.93□□□□□ -0.18
COL7A1-209ENST00000474432 ZNF436Q9C0F3 470 aaPredicted RBP13.93□□□□□ -0.18
COL7A1-209ENST00000474432 HIPK2Q9H2X6 1198 aa13.93□□□□□ -0.18
COL7A1-209ENST00000474432 RETNQ9HD89 108 aa13.93□□□□□ -0.18
COL7A1-209ENST00000474432 SLC2A8Q9NY64 477 aa13.93□□□□□ -0.18
COL7A1-209ENST00000474432 CEPT1Q9Y6K0 416 aa13.93□□□□□ -0.18
COL7A1-209ENST00000474432 IGHV3-35A0A0C4DH35 117 aa13.92□□□□□ -0.18
COL7A1-209ENST00000474432 SMIM31A0A1B0GVY4 71 aa13.92□□□□□ -0.18
COL7A1-209ENST00000474432 TPPPO94811 219 aa13.92□□□□□ -0.18
COL7A1-209ENST00000474432 GABARAPO95166 117 aa13.92□□□□□ -0.18
COL7A1-209ENST00000474432 LYL1P12980 280 aa13.92□□□□□ -0.18
COL7A1-209ENST00000474432 RCVRNP35243 200 aa13.92□□□□□ -0.18
COL7A1-209ENST00000474432 UCP3P55916 312 aa13.92□□□□□ -0.18
COL7A1-209ENST00000474432 GUCA2BQ16661 112 aa13.92□□□□□ -0.18
COL7A1-209ENST00000474432 HSD17B13Q7Z5P4 300 aaPredicted RBP13.92□□□□□ -0.18
COL7A1-209ENST00000474432 TBC1D26Q86UD7 250 aa13.92□□□□□ -0.18
COL7A1-209ENST00000474432 SEC22AQ96IW7 307 aa13.92□□□□□ -0.18
COL7A1-209ENST00000474432 FAM212BQ9NTI7 297 aaPredicted RBP13.92□□□□□ -0.18
COL7A1-209ENST00000474432 TMEM14BQ9NUH8 114 aa13.92□□□□□ -0.18
COL7A1-209ENST00000474432 OR51B2Q9Y5P1 312 aa13.92□□□□□ -0.18
COL7A1-209ENST00000474432 F11RQ9Y624 299 aaKnown RBP13.92□□□□□ -0.18
COL7A1-209ENST00000474432 OR11H12B2RN74 326 aa13.91□□□□□ -0.18
COL7A1-209ENST00000474432 K7EIM0 57 aa13.91□□□□□ -0.18
COL7A1-209ENST00000474432 TGOLN2O43493 480 aa13.91□□□□□ -0.18
COL7A1-209ENST00000474432 RORCP51449 518 aa13.91□□□□□ -0.18
COL7A1-209ENST00000474432 ZNF57Q68EA5 555 aaPredicted RBP13.91□□□□□ -0.18
COL7A1-209ENST00000474432 LSM10Q969L4 123 aaKnown RBP13.91□□□□□ -0.18
COL7A1-209ENST00000474432 GAR1Q9NY12 217 aaKnown RBP13.91□□□□□ -0.18
COL7A1-209ENST00000474432 THYN1Q9P016 225 aa13.91□□□□□ -0.18
COL7A1-209ENST00000474432 M0QYG6 137 aa13.9□□□□□ -0.18
COL7A1-209ENST00000474432 ADMP35318 185 aa13.9□□□□□ -0.18
COL7A1-209ENST00000474432 TSPAN5P62079 268 aa13.9□□□□□ -0.18
COL7A1-209ENST00000474432 ZFAND6Q6FIF0 208 aa13.9□□□□□ -0.18
COL7A1-209ENST00000474432 SLC25A24Q6NUK1 477 aa13.9□□□□□ -0.18
COL7A1-209ENST00000474432 LPCAT3Q6P1A2 487 aa13.9□□□□□ -0.18
COL7A1-209ENST00000474432 PLET1Q6UQ28 207 aa13.9□□□□□ -0.18
COL7A1-209ENST00000474432 BTNL8Q6UX41 500 aa13.9□□□□□ -0.18
COL7A1-209ENST00000474432 LHFPL1Q86WI0 220 aa13.9□□□□□ -0.18
COL7A1-209ENST00000474432 SCARB1Q8WTV0 552 aa13.9□□□□□ -0.18
COL7A1-209ENST00000474432 CHRDL1Q9BU40 450 aa13.9□□□□□ -0.18
COL7A1-209ENST00000474432 HINT2Q9BX68 163 aa13.9□□□□□ -0.18
COL7A1-209ENST00000474432 SRD5A3Q9H8P0 318 aa13.9□□□□□ -0.18
COL7A1-209ENST00000474432 KLK11Q9UBX7 282 aa13.9□□□□□ -0.18
COL7A1-209ENST00000474432 PRNDQ9UKY0 176 aa13.9□□□□□ -0.18
COL7A1-209ENST00000474432 IGHV3-21A0A0B4J1V1 117 aa13.89□□□□□ -0.19
COL7A1-209ENST00000474432 C15orf61A6NNL5 157 aa13.89□□□□□ -0.19
COL7A1-209ENST00000474432 SNAPC5O75971 98 aa13.89□□□□□ -0.19
COL7A1-209ENST00000474432 ELLP55199 621 aaPredicted RBP13.89□□□□□ -0.19
COL7A1-209ENST00000474432 OR5B3Q8NH48 314 aa13.89□□□□□ -0.19
COL7A1-209ENST00000474432 TMEM190Q8WZ59 177 aa13.89□□□□□ -0.19
COL7A1-209ENST00000474432 ISOC1Q96CN7 298 aa13.89□□□□□ -0.19
COL7A1-209ENST00000474432 ABHD1Q96SE0 405 aa13.89□□□□□ -0.19
COL7A1-209ENST00000474432 MRPL27Q9P0M9 148 aaKnown RBP13.89□□□□□ -0.19
COL7A1-209ENST00000474432 OR2T8A6NH00 312 aa13.88□□□□□ -0.19
COL7A1-209ENST00000474432 SCAF4O95104 1147 aaKnown RBP13.88□□□□□ -0.19
COL7A1-209ENST00000474432 ZNF182P17025 639 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms