RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 DNAH1Q9P2D7 4330 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 TRAV40A0A0B4J280 105 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 PIGBOS1A0A0B4J2F0 54 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 FAM74A7A6NL05 159 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 G3V3Q6 166 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 NUPL2O15504 423 aaKnown RBP5.11□□□□□ -1.59
HDAC1-205ENST00000472928 RAMP3O60896 148 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 FCGR3BO75015 233 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 OR2A4O95047 310 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 CDS2O95674 445 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 IGKV1-39P01597 117 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 APOA2P02652 100 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 IGKV1D-39P04432 117 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 FBP1P09467 338 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 RPA2P15927 270 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 LPAR6P43657 344 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 LINC00205P59089 165 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 GUCA2BQ16661 112 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 RTL8BQ17RB0 113 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 RNF212Q495C1 297 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 FAM74A3Q4VXF1 159 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 ZNF585BQ52M93 769 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 NMSQ5H8A3 153 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 NCR3LG1Q68D85 454 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 DHRS7BQ6IAN0 325 aaPredicted RBP5.11□□□□□ -1.59
HDAC1-205ENST00000472928 FAM71F2Q6NXP2 309 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 ATRAIDQ6UW56 229 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 UQCC3Q6UW78 93 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 ZNF833PQ6ZTB9 187 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 TCTEX1D1Q8N7M0 179 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 OR4S2Q8NH73 311 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 ZNF596Q8TC21 504 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 TNFRSF14Q92956 283 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 SEC22AQ96IW7 307 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 OR10C1Q96KK4 312 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 C2orf50Q96LR7 162 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 OR2A7Q96R45 310 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 SPIN2AQ99865 258 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 SPIN2BQ9BPZ2 258 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 PCGF1Q9BSM1 259 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 NMES1Q9C002 83 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 SIRPDQ9H106 197 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 SLC35D1Q9NTN3 355 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 COMMD9Q9P000 198 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 GSKIPQ9P0R6 139 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 TMED3Q9Y3Q3 217 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 KPTNQ9Y664 436 aa5.11□□□□□ -1.59
HDAC1-205ENST00000472928 TRAV14DV4A0A0A6YYC5 116 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 A0A0G2JRQ6 117 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 A0A1W2PRD5 423 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 A0A1W2PRF3 423 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 A0A1W2PRM7 423 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 HMSDA8MTL9 139 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 ODF3BA8MYP8 253 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 H0YJW9 148 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 TEX46H3BTG2 121 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 L7N2F9 121 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 RBFOX2O43251 390 aaKnown RBP eCLIP5.1□□□□□ -1.59
HDAC1-205ENST00000472928 PROP1O75360 226 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 CLN5O75503 358 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 EIF3GO75821 320 aaKnown RBP eCLIP5.1□□□□□ -1.59
HDAC1-205ENST00000472928 ATG12O94817 140 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 TOX4O94842 621 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 NXPH3O95157 252 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 IGKV1-5P01602 117 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 IGLV1-47P01700 117 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 APOC3P02656 99 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 OPN1MWP04001 364 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 RLN2P04090 185 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 ARG1P05089 322 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 CRYBA1P05813 215 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 PET100P0DJ07 73 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 OPN1MW2P0DN77 364 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 OPN1MW3P0DN78 364 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 FOLR2P14207 255 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 MMP9P14780 707 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 VDAC1P21796 283 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 G6PCP35575 357 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 ZNF137PP52743 207 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 PRRX1P54821 245 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 ERVK-16P61578 105 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 CYCSP99999 105 aaKnown RBP5.1□□□□□ -1.59
HDAC1-205ENST00000472928 DIAPH2-AS1Q14236 149 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 IZUMO4Q1ZYL8 232 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 HCP5Q6MZN7 132 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 C11orf87Q6NUJ2 197 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 BRD3OSQ6XYD6 125 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 Q6YL49 198 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 TGIF2LXQ8IUE1 241 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 FOXRED2Q8IWF2 684 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 Q8N3U1 123 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 TMEM86BQ8N661 226 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 ZNF383Q8NA42 475 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 BEND2Q8NDZ0 799 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 OR4P4Q8NGL7 312 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 OR1S1Q8NH92 325 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 CD300LFQ8TDQ1 290 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 PPP1R1CQ8WVI7 109 aa5.1□□□□□ -1.59
HDAC1-205ENST00000472928 PCNPQ8WW12 178 aaKnown RBP5.1□□□□□ -1.59
HDAC1-205ENST00000472928 DDB2Q92466 427 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms