RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 SAT2Q96F10 170 aaPredicted RBP11.74□□□□□ -0.53
HIF3A-206ENST00000472815 UQCC1Q9NVA1 299 aa11.74□□□□□ -0.53
HIF3A-206ENST00000472815 CENPVL3A0A0U1RRI6 287 aa11.74□□□□□ -0.53
HIF3A-206ENST00000472815 C15orf62A8K5M9 175 aa11.74□□□□□ -0.53
HIF3A-206ENST00000472815 UMAD1C9J7I0 102 aa11.74□□□□□ -0.53
HIF3A-206ENST00000472815 RRHO14718 337 aa11.74□□□□□ -0.53
HIF3A-206ENST00000472815 SNRNP70P08621 437 aaKnown RBP11.74□□□□□ -0.53
HIF3A-206ENST00000472815 SULT1A2P50226 295 aa11.74□□□□□ -0.53
HIF3A-206ENST00000472815 BLOC1S1P78537 153 aa11.74□□□□□ -0.53
HIF3A-206ENST00000472815 HSD17B13Q7Z5P4 300 aaPredicted RBP11.74□□□□□ -0.53
HIF3A-206ENST00000472815 SLC7A5P1Q8MH63 180 aa11.74□□□□□ -0.53
HIF3A-206ENST00000472815 C7orf69Q9H7B7 122 aa11.74□□□□□ -0.53
HIF3A-206ENST00000472815 HIF1ANQ9NWT6 349 aa11.74□□□□□ -0.53
HIF3A-206ENST00000472815 C1RLQ9NZP8 487 aa11.74□□□□□ -0.53
HIF3A-206ENST00000472815 FLNBO75369 2602 aaKnown RBP11.74□□□□□ -0.53
HIF3A-206ENST00000472815 TNCP24821 2201 aa11.73□□□□□ -0.53
HIF3A-206ENST00000472815 MED13LQ71F56 2210 aa11.73□□□□□ -0.53
HIF3A-206ENST00000472815 IGHV1-69DA0A0B4J2H0 117 aa11.73□□□□□ -0.53
HIF3A-206ENST00000472815 TRIM77I1YAP6 450 aa11.73□□□□□ -0.53
HIF3A-206ENST00000472815 J3QLI3 93 aa11.73□□□□□ -0.53
HIF3A-206ENST00000472815 IGHV1-69P01742 117 aa11.73□□□□□ -0.53
HIF3A-206ENST00000472815 CRYGBP07316 175 aa11.73□□□□□ -0.53
HIF3A-206ENST00000472815 TNXAQ16473 311 aa11.73□□□□□ -0.53
HIF3A-206ENST00000472815 THNSL2Q86YJ6 484 aa11.73□□□□□ -0.53
HIF3A-206ENST00000472815 NPBQ8NG41 125 aa11.73□□□□□ -0.53
HIF3A-206ENST00000472815 EAF1Q96JC9 268 aaPredicted RBP11.73□□□□□ -0.53
HIF3A-206ENST00000472815 MED9Q9NWA0 146 aa11.73□□□□□ -0.53
HIF3A-206ENST00000472815 ABCA2Q9BZC7 2435 aa11.72□□□□□ -0.53
HIF3A-206ENST00000472815 PMS2P5A8MQ11 134 aa11.72□□□□□ -0.53
HIF3A-206ENST00000472815 ZNF705EA8MWA4 302 aaPredicted RBP11.72□□□□□ -0.53
HIF3A-206ENST00000472815 FGF16O43320 207 aa11.72□□□□□ -0.53
HIF3A-206ENST00000472815 OPN1MWP04001 364 aa11.72□□□□□ -0.53
HIF3A-206ENST00000472815 OPN1MW2P0DN77 364 aa11.72□□□□□ -0.53
HIF3A-206ENST00000472815 OPN1MW3P0DN78 364 aa11.72□□□□□ -0.53
HIF3A-206ENST00000472815 ATP6V0CP27449 155 aa11.72□□□□□ -0.53
HIF3A-206ENST00000472815 RPL27AP46776 148 aaKnown RBP11.72□□□□□ -0.53
HIF3A-206ENST00000472815 ARL16Q0P5N6 197 aa11.72□□□□□ -0.53
HIF3A-206ENST00000472815 EBI3Q14213 229 aa11.72□□□□□ -0.53
HIF3A-206ENST00000472815 LRRC75BQ2VPJ9 315 aa11.72□□□□□ -0.53
HIF3A-206ENST00000472815 C2orf83Q53S99 150 aa11.72□□□□□ -0.53
HIF3A-206ENST00000472815 HAPLN4Q86UW8 402 aa11.72□□□□□ -0.53
HIF3A-206ENST00000472815 OR2G3Q8NGZ4 309 aa11.72□□□□□ -0.53
HIF3A-206ENST00000472815 RITA1Q96K30 269 aa11.72□□□□□ -0.53
HIF3A-206ENST00000472815 TRAV40A0A0B4J280 105 aa11.72□□□□□ -0.53
HIF3A-206ENST00000472815 UBE2L5PA0A1B0GUS4 154 aa11.72□□□□□ -0.53
HIF3A-206ENST00000472815 NDUFA3O95167 84 aa11.72□□□□□ -0.53
HIF3A-206ENST00000472815 PRH1P02810 166 aa11.72□□□□□ -0.53
HIF3A-206ENST00000472815 TMEM11P17152 192 aa11.72□□□□□ -0.53
HIF3A-206ENST00000472815 S100A1P23297 94 aa11.72□□□□□ -0.53
HIF3A-206ENST00000472815 COMPP49747 757 aaPredicted RBP11.72□□□□□ -0.53
HIF3A-206ENST00000472815 DLK1P80370 383 aa11.72□□□□□ -0.53
HIF3A-206ENST00000472815 SRSF8Q9BRL6 282 aaKnown RBP11.72□□□□□ -0.53
HIF3A-206ENST00000472815 PSMG3Q9BT73 122 aaPredicted RBP11.72□□□□□ -0.53
HIF3A-206ENST00000472815 REG4Q9BYZ8 158 aa11.72□□□□□ -0.53
HIF3A-206ENST00000472815 WDR61Q9GZS3 305 aaKnown RBP11.72□□□□□ -0.53
HIF3A-206ENST00000472815 NAV2Q8IVL1 2488 aa11.71□□□□□ -0.53
HIF3A-206ENST00000472815 PDZD2O15018 2839 aa11.71□□□□□ -0.54
HIF3A-206ENST00000472815 A0A096LNT2 108 aa11.71□□□□□ -0.54
HIF3A-206ENST00000472815 FNDC10F2Z333 226 aa11.71□□□□□ -0.54
HIF3A-206ENST00000472815 C17orf112F2Z3M2 114 aa11.71□□□□□ -0.54
HIF3A-206ENST00000472815 SOX15O60248 233 aa11.71□□□□□ -0.54
HIF3A-206ENST00000472815 MPDU1O75352 247 aa11.71□□□□□ -0.54
HIF3A-206ENST00000472815 TSPAN9O75954 239 aa11.71□□□□□ -0.54
HIF3A-206ENST00000472815 CA2P00918 260 aa11.71□□□□□ -0.54
HIF3A-206ENST00000472815 MYOD1P15172 320 aa11.71□□□□□ -0.54
HIF3A-206ENST00000472815 CNTFRP26992 372 aa11.71□□□□□ -0.54
HIF3A-206ENST00000472815 SERF2P84101 59 aa11.71□□□□□ -0.54
HIF3A-206ENST00000472815 VWC2Q2TAL6 325 aa11.71□□□□□ -0.54
HIF3A-206ENST00000472815 AKR1C8PQ5T2L2 129 aa11.71□□□□□ -0.54
HIF3A-206ENST00000472815 ZNF709Q8N972 641 aa11.71□□□□□ -0.54
HIF3A-206ENST00000472815 PCNPQ8WW12 178 aaKnown RBP11.71□□□□□ -0.54
HIF3A-206ENST00000472815 RBMXL1Q96E39 390 aaKnown RBP11.71□□□□□ -0.54
HIF3A-206ENST00000472815 FBXL15Q9H469 300 aa11.71□□□□□ -0.54
HIF3A-206ENST00000472815 TIMM9Q9Y5J7 89 aa11.71□□□□□ -0.54
HIF3A-206ENST00000472815 NUDT19A8MXV4 375 aa11.7□□□□□ -0.54
HIF3A-206ENST00000472815 RNF223E7ERA6 249 aa11.7□□□□□ -0.54
HIF3A-206ENST00000472815 FAM157CP0CG43 387 aa11.7□□□□□ -0.54
HIF3A-206ENST00000472815 BPIFB3P59826 476 aa11.7□□□□□ -0.54
HIF3A-206ENST00000472815 HNF4GQ14541 408 aa11.7□□□□□ -0.54
HIF3A-206ENST00000472815 DPPA3Q6W0C5 159 aa11.7□□□□□ -0.54
HIF3A-206ENST00000472815 COMMD7Q86VX2 200 aa11.7□□□□□ -0.54
HIF3A-206ENST00000472815 TAF15Q92804 592 aaKnown RBP eCLIP11.7□□□□□ -0.54
HIF3A-206ENST00000472815 SH3BGRL3Q9H299 93 aa11.7□□□□□ -0.54
HIF3A-206ENST00000472815 TPSG1Q9NRR2 321 aa11.7□□□□□ -0.54
HIF3A-206ENST00000472815 FAM96BQ9Y3D0 163 aa11.7□□□□□ -0.54
HIF3A-206ENST00000472815 FBXO7Q9Y3I1 522 aa11.7□□□□□ -0.54
HIF3A-206ENST00000472815 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.69□□□□□ -0.54
HIF3A-206ENST00000472815 CNIH1O95406 144 aa11.69□□□□□ -0.54
HIF3A-206ENST00000472815 CAMLGP49069 296 aa11.69□□□□□ -0.54
HIF3A-206ENST00000472815 GNB1P62873 340 aa11.69□□□□□ -0.54
HIF3A-206ENST00000472815 PJVKQ0ZLH3 352 aa11.69□□□□□ -0.54
HIF3A-206ENST00000472815 C5orf64Q2M2E5 130 aa11.69□□□□□ -0.54
HIF3A-206ENST00000472815 BSXQ3C1V8 233 aa11.69□□□□□ -0.54
HIF3A-206ENST00000472815 TMEM182Q6ZP80 229 aaPredicted RBP11.69□□□□□ -0.54
HIF3A-206ENST00000472815 DYNAPQ8N1N2 210 aa11.69□□□□□ -0.54
HIF3A-206ENST00000472815 PARP11Q9NR21 331 aa11.69□□□□□ -0.54
HIF3A-206ENST00000472815 KCNIP2Q9NS61 270 aa11.69□□□□□ -0.54
HIF3A-206ENST00000472815 SMCO3A2RU48 225 aa11.69□□□□□ -0.54
HIF3A-206ENST00000472815 NCBP2LA6PVI3 153 aaKnown RBP11.69□□□□□ -0.54
HIF3A-206ENST00000472815 OR13C7P0DN81 318 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms