RNA–Protein interactions for RNA: ENST00000472588.5

PAXBP1-208, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 1,410 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-208ENST00000472588 SSSCA1O60232 199 aa17.7■□□□□ 0.42
PAXBP1-208ENST00000472588 GPR137BO60478 399 aa17.7■□□□□ 0.42
PAXBP1-208ENST00000472588 OPN1MWP04001 364 aa17.7■□□□□ 0.42
PAXBP1-208ENST00000472588 OPN1MW2P0DN77 364 aa17.7■□□□□ 0.42
PAXBP1-208ENST00000472588 OPN1MW3P0DN78 364 aa17.7■□□□□ 0.42
PAXBP1-208ENST00000472588 HOXA1P49639 335 aaPredicted RBP17.7■□□□□ 0.42
PAXBP1-208ENST00000472588 RIPPLY3P57055 190 aa17.7■□□□□ 0.42
PAXBP1-208ENST00000472588 ARPC1AQ92747 370 aa17.7■□□□□ 0.42
PAXBP1-208ENST00000472588 PPP1R14BQ96C90 147 aa17.7■□□□□ 0.42
PAXBP1-208ENST00000472588 RCL1Q9Y2P8 373 aaKnown RBP17.7■□□□□ 0.42
PAXBP1-208ENST00000472588 WSB1Q9Y6I7 421 aa17.7■□□□□ 0.42
PAXBP1-208ENST00000472588 INS-IGF2F8WCM5 200 aa17.69■□□□□ 0.42
PAXBP1-208ENST00000472588 KCNAB3O43448 404 aa17.69■□□□□ 0.42
PAXBP1-208ENST00000472588 C1QBP02746 253 aa17.69■□□□□ 0.42
PAXBP1-208ENST00000472588 AMY1AP04745 511 aa17.69■□□□□ 0.42
PAXBP1-208ENST00000472588 SLC25A4P12235 298 aa17.69■□□□□ 0.42
PAXBP1-208ENST00000472588 TAS2R30P59541 319 aa17.69■□□□□ 0.42
PAXBP1-208ENST00000472588 RPL23AP62750 156 aaKnown RBP17.69■□□□□ 0.42
PAXBP1-208ENST00000472588 ERHP84090 104 aaKnown RBP17.69■□□□□ 0.42
PAXBP1-208ENST00000472588 HEYLQ9NQ87 328 aaPredicted RBP17.69■□□□□ 0.42
PAXBP1-208ENST00000472588 C2CD3Q4AC94 2353 aa17.68■□□□□ 0.42
PAXBP1-208ENST00000472588 IGHV7-81A0A0B4J1V7 117 aa17.68■□□□□ 0.42
PAXBP1-208ENST00000472588 DNAJC9-AS1A6NH13 148 aa17.68■□□□□ 0.42
PAXBP1-208ENST00000472588 LYL1P12980 280 aa17.68■□□□□ 0.42
PAXBP1-208ENST00000472588 MYOD1P15172 320 aa17.68■□□□□ 0.42
PAXBP1-208ENST00000472588 RPP30P78346 268 aaKnown RBP17.68■□□□□ 0.42
PAXBP1-208ENST00000472588 ZFP69Q49AA0 526 aa17.68■□□□□ 0.42
PAXBP1-208ENST00000472588 SMIM8Q96KF7 97 aa17.68■□□□□ 0.42
PAXBP1-208ENST00000472588 NPFFR1Q9GZQ6 430 aa17.68■□□□□ 0.42
PAXBP1-208ENST00000472588 TRAV14DV4A0A0A6YYC5 116 aa17.67■□□□□ 0.42
PAXBP1-208ENST00000472588 HILS1P60008 231 aa17.67■□□□□ 0.42
PAXBP1-208ENST00000472588 RPL15P61313 204 aaKnown RBP17.67■□□□□ 0.42
PAXBP1-208ENST00000472588 Q5BKY6 102 aa17.67■□□□□ 0.42
PAXBP1-208ENST00000472588 C10orf55Q5SWW7 151 aa17.67■□□□□ 0.42
PAXBP1-208ENST00000472588 ABHD5Q8WTS1 349 aa17.67■□□□□ 0.42
PAXBP1-208ENST00000472588 HYLS1Q96M11 299 aa17.67■□□□□ 0.42
PAXBP1-208ENST00000472588 RNF126Q9BV68 326 aa17.67■□□□□ 0.42
PAXBP1-208ENST00000472588 MBD2Q9UBB5 411 aa17.67■□□□□ 0.42
PAXBP1-208ENST00000472588 MSGN1A6NI15 193 aa17.66■□□□□ 0.42
PAXBP1-208ENST00000472588 H0YIZ8 118 aa17.66■□□□□ 0.42
PAXBP1-208ENST00000472588 SMLR1H3BR10 107 aa17.66■□□□□ 0.42
PAXBP1-208ENST00000472588 NUP62P37198 522 aaPredicted RBP17.66■□□□□ 0.42
PAXBP1-208ENST00000472588 P2RY1P47900 373 aa17.66■□□□□ 0.42
PAXBP1-208ENST00000472588 ATP5IP56385 69 aaPredicted RBP17.66■□□□□ 0.42
PAXBP1-208ENST00000472588 SSBP2P81877 361 aaPredicted RBP17.66■□□□□ 0.42
PAXBP1-208ENST00000472588 CD300CQ08708 224 aa17.66■□□□□ 0.42
PAXBP1-208ENST00000472588 SPINK9Q5DT21 86 aa17.66■□□□□ 0.42
PAXBP1-208ENST00000472588 GRPEL2Q8TAA5 225 aa17.66■□□□□ 0.42
PAXBP1-208ENST00000472588 DCUN1D4Q92564 292 aa17.66■□□□□ 0.42
PAXBP1-208ENST00000472588 TMEM68Q96MH6 324 aa17.66■□□□□ 0.42
PAXBP1-208ENST00000472588 PRSS22Q9GZN4 317 aa17.66■□□□□ 0.42
PAXBP1-208ENST00000472588 PSENENQ9NZ42 101 aa17.66■□□□□ 0.42
PAXBP1-208ENST00000472588 OR5AC2Q9NZP5 309 aa17.66■□□□□ 0.42
PAXBP1-208ENST00000472588 U3KQ87 197 aa17.66■□□□□ 0.42
PAXBP1-208ENST00000472588 E7EUB6 86 aa17.65■□□□□ 0.42
PAXBP1-208ENST00000472588 G3V3Q6 166 aa17.65■□□□□ 0.42
PAXBP1-208ENST00000472588 TRIM77I1YAP6 450 aa17.65■□□□□ 0.42
PAXBP1-208ENST00000472588 TSC22D2O75157 780 aa17.65■□□□□ 0.42
PAXBP1-208ENST00000472588 IGHG2P01859 326 aa17.65■□□□□ 0.42
PAXBP1-208ENST00000472588 IAPPP10997 89 aa17.65■□□□□ 0.42
PAXBP1-208ENST00000472588 VDAC2P45880 294 aaPredicted RBP17.65■□□□□ 0.42
PAXBP1-208ENST00000472588 C9orf152Q5JTZ5 239 aa17.65■□□□□ 0.42
PAXBP1-208ENST00000472588 TMEM65Q6PI78 240 aa17.65■□□□□ 0.42
PAXBP1-208ENST00000472588 ZNF546Q86UE3 836 aa17.65■□□□□ 0.42
PAXBP1-208ENST00000472588 HSPB9Q9BQS6 159 aa17.65■□□□□ 0.42
PAXBP1-208ENST00000472588 FXYD6-FXYD2A0A087WZ82 144 aa17.64■□□□□ 0.42
PAXBP1-208ENST00000472588 CGB1A6NKQ9 187 aa17.64■□□□□ 0.42
PAXBP1-208ENST00000472588 HMSDA8MTL9 139 aa17.64■□□□□ 0.42
PAXBP1-208ENST00000472588 SNCAP37840 140 aa17.64■□□□□ 0.42
PAXBP1-208ENST00000472588 HTR2BP41595 481 aa17.64■□□□□ 0.42
PAXBP1-208ENST00000472588 SUB1P53999 127 aaKnown RBP eCLIP17.64■□□□□ 0.42
PAXBP1-208ENST00000472588 BLCAPP62952 87 aa17.64■□□□□ 0.42
PAXBP1-208ENST00000472588 TMEM267Q0VDI3 215 aaPredicted RBP17.64■□□□□ 0.42
PAXBP1-208ENST00000472588 SLC35E3Q7Z769 313 aa17.64■□□□□ 0.42
PAXBP1-208ENST00000472588 NOXA1Q86UR1 476 aa17.64■□□□□ 0.42
PAXBP1-208ENST00000472588 INO80EQ8NBZ0 244 aaPredicted RBP17.64■□□□□ 0.42
PAXBP1-208ENST00000472588 SGMS2Q8NHU3 365 aa17.64■□□□□ 0.42
PAXBP1-208ENST00000472588 DUX5Q96PT3 197 aa17.64■□□□□ 0.42
PAXBP1-208ENST00000472588 PLXNB1O43157 2135 aa17.64■□□□□ 0.41
PAXBP1-208ENST00000472588 RNASE1P07998 156 aaKnown RBP17.64■□□□□ 0.41
PAXBP1-208ENST00000472588 OR2C3Q8N628 320 aa17.64■□□□□ 0.41
PAXBP1-208ENST00000472588 OR10W1Q8NGF6 305 aa17.64■□□□□ 0.41
PAXBP1-208ENST00000472588 SLC25A31Q9H0C2 315 aa17.64■□□□□ 0.41
PAXBP1-208ENST00000472588 C11orf1Q9H5F2 150 aa17.64■□□□□ 0.41
PAXBP1-208ENST00000472588 PARP11Q9NR21 331 aa17.64■□□□□ 0.41
PAXBP1-208ENST00000472588 LYRM2Q9NU23 88 aaPredicted RBP17.64■□□□□ 0.41
PAXBP1-208ENST00000472588 STRAPQ9Y3F4 350 aaKnown RBP17.64■□□□□ 0.41
PAXBP1-208ENST00000472588 IGLC7A0M8Q6 106 aa17.63■□□□□ 0.41
PAXBP1-208ENST00000472588 TEX22C9J3V5 150 aa17.63■□□□□ 0.41
PAXBP1-208ENST00000472588 SCAF4O95104 1147 aaKnown RBP17.63■□□□□ 0.41
PAXBP1-208ENST00000472588 IFNA10P01566 189 aa17.63■□□□□ 0.41
PAXBP1-208ENST00000472588 OR13C7P0DN81 318 aa17.63■□□□□ 0.41
PAXBP1-208ENST00000472588 CAV2P51636 162 aa17.63■□□□□ 0.41
PAXBP1-208ENST00000472588 PAX9P55771 341 aa17.63■□□□□ 0.41
PAXBP1-208ENST00000472588 SPANXN5Q5MJ07 72 aa17.63■□□□□ 0.41
PAXBP1-208ENST00000472588 ESM1Q9NQ30 184 aa17.63■□□□□ 0.41
PAXBP1-208ENST00000472588 A0A1B0GW64 132 aa17.62■□□□□ 0.41
PAXBP1-208ENST00000472588 SH2D7A6NKC9 451 aaPredicted RBP17.62■□□□□ 0.41
PAXBP1-208ENST00000472588 TCF21O43680 179 aa17.62■□□□□ 0.41
PAXBP1-208ENST00000472588 IGF1P05019 195 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms