RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 E7EUB6 86 aa20.79■□□□□ 0.92
U2AF1-208ENST00000471250 CA2P00918 260 aa20.79■□□□□ 0.92
U2AF1-208ENST00000471250 S100A1P23297 94 aa20.79■□□□□ 0.92
U2AF1-208ENST00000471250 ATP5IP56385 69 aaPredicted RBP20.79■□□□□ 0.92
U2AF1-208ENST00000471250 OR2T10Q8NGZ9 312 aa20.79■□□□□ 0.92
U2AF1-208ENST00000471250 MBD6Q96DN6 1003 aa20.79■□□□□ 0.92
U2AF1-208ENST00000471250 EAF1Q96JC9 268 aaPredicted RBP20.79■□□□□ 0.92
U2AF1-208ENST00000471250 RFNGQ9Y644 331 aa20.79■□□□□ 0.92
U2AF1-208ENST00000471250 FBN2P35556 2912 aa20.78■□□□□ 0.92
U2AF1-208ENST00000471250 SNRNP70P08621 437 aaKnown RBP20.78■□□□□ 0.92
U2AF1-208ENST00000471250 SAA4P35542 130 aa20.78■□□□□ 0.92
U2AF1-208ENST00000471250 RAB5CP51148 216 aa20.78■□□□□ 0.92
U2AF1-208ENST00000471250 EBI3Q14213 229 aa20.78■□□□□ 0.92
U2AF1-208ENST00000471250 BSXQ3C1V8 233 aa20.78■□□□□ 0.92
U2AF1-208ENST00000471250 PPP1R27Q86WC6 154 aa20.78■□□□□ 0.92
U2AF1-208ENST00000471250 NPBQ8NG41 125 aa20.78■□□□□ 0.92
U2AF1-208ENST00000471250 OR10W1Q8NGF6 305 aa20.78■□□□□ 0.92
U2AF1-208ENST00000471250 GGACTQ9BVM4 153 aa20.78■□□□□ 0.92
U2AF1-208ENST00000471250 FBXL15Q9H469 300 aa20.78■□□□□ 0.92
U2AF1-208ENST00000471250 UBE2L5PA0A1B0GUS4 154 aa20.77■□□□□ 0.92
U2AF1-208ENST00000471250 BLOC1S1P78537 153 aa20.77■□□□□ 0.92
U2AF1-208ENST00000471250 C10orf55Q5SWW7 151 aa20.77■□□□□ 0.92
U2AF1-208ENST00000471250 HIST2H2BCQ6DN03 193 aa20.77■□□□□ 0.92
U2AF1-208ENST00000471250 TMEM182Q6ZP80 229 aaPredicted RBP20.77■□□□□ 0.92
U2AF1-208ENST00000471250 CITED4Q96RK1 184 aa20.77■□□□□ 0.92
U2AF1-208ENST00000471250 A0A1B0GW64 132 aa20.77■□□□□ 0.91
U2AF1-208ENST00000471250 NBR2O15453 112 aa20.77■□□□□ 0.91
U2AF1-208ENST00000471250 NDUFA3O95167 84 aa20.77■□□□□ 0.91
U2AF1-208ENST00000471250 IFNA4P05014 189 aa20.77■□□□□ 0.91
U2AF1-208ENST00000471250 ERHP84090 104 aaKnown RBP20.77■□□□□ 0.91
U2AF1-208ENST00000471250 C2orf83Q53S99 150 aa20.77■□□□□ 0.91
U2AF1-208ENST00000471250 TAF15Q92804 592 aaKnown RBP eCLIP20.77■□□□□ 0.91
U2AF1-208ENST00000471250 REG4Q9BYZ8 158 aa20.77■□□□□ 0.91
U2AF1-208ENST00000471250 TRAV20A0A0B4J274 112 aa20.76■□□□□ 0.91
U2AF1-208ENST00000471250 CD24P25063 80 aa20.76■□□□□ 0.91
U2AF1-208ENST00000471250 DLK1P80370 383 aa20.76■□□□□ 0.91
U2AF1-208ENST00000471250 LOXL1Q08397 574 aaPredicted RBP20.76■□□□□ 0.91
U2AF1-208ENST00000471250 HNF4GQ14541 408 aa20.76■□□□□ 0.91
U2AF1-208ENST00000471250 MMDQ15546 238 aa20.76■□□□□ 0.91
U2AF1-208ENST00000471250 TNXAQ16473 311 aa20.76■□□□□ 0.91
U2AF1-208ENST00000471250 PIP4P2Q8N4L2 257 aa20.76■□□□□ 0.91
U2AF1-208ENST00000471250 PSMG3Q9BT73 122 aaPredicted RBP20.76■□□□□ 0.91
U2AF1-208ENST00000471250 CRYBG3Q68DQ2 2970 aa20.75■□□□□ 0.91
U2AF1-208ENST00000471250 IGHV1-69DA0A0B4J2H0 117 aa20.75■□□□□ 0.91
U2AF1-208ENST00000471250 UMAD1C9J7I0 102 aa20.75■□□□□ 0.91
U2AF1-208ENST00000471250 IGHV1-69P01742 117 aa20.75■□□□□ 0.91
U2AF1-208ENST00000471250 RNASE2P10153 161 aaKnown RBP20.75■□□□□ 0.91
U2AF1-208ENST00000471250 MDKP21741 143 aaPredicted RBP20.75■□□□□ 0.91
U2AF1-208ENST00000471250 RPL27AP46776 148 aaKnown RBP20.75■□□□□ 0.91
U2AF1-208ENST00000471250 HES1Q14469 280 aa20.75■□□□□ 0.91
U2AF1-208ENST00000471250 Q8N6K4 173 aa20.75■□□□□ 0.91
U2AF1-208ENST00000471250 RSG1Q9BU20 258 aa20.75■□□□□ 0.91
U2AF1-208ENST00000471250 PARP11Q9NR21 331 aa20.75■□□□□ 0.91
U2AF1-208ENST00000471250 TRIM77I1YAP6 450 aa20.74■□□□□ 0.91
U2AF1-208ENST00000471250 ACTL6BO94805 426 aa20.74■□□□□ 0.91
U2AF1-208ENST00000471250 GATA3P23771 443 aa20.74■□□□□ 0.91
U2AF1-208ENST00000471250 COMPP49747 757 aaPredicted RBP20.74■□□□□ 0.91
U2AF1-208ENST00000471250 FBLN7Q53RD9 439 aa20.74■□□□□ 0.91
U2AF1-208ENST00000471250 LINC01356Q8N9X3 169 aa20.74■□□□□ 0.91
U2AF1-208ENST00000471250 HIF1ANQ9NWT6 349 aa20.74■□□□□ 0.91
U2AF1-208ENST00000471250 KIAA1456Q9P272 454 aa20.74■□□□□ 0.91
U2AF1-208ENST00000471250 MFSD2BA6NFX1 497 aa20.73■□□□□ 0.91
U2AF1-208ENST00000471250 SNCAP37840 140 aa20.73■□□□□ 0.91
U2AF1-208ENST00000471250 WT1-ASQ06250 92 aa20.73■□□□□ 0.91
U2AF1-208ENST00000471250 Q5PR19 223 aa20.73■□□□□ 0.91
U2AF1-208ENST00000471250 PXDC1Q5TGL8 231 aa20.73■□□□□ 0.91
U2AF1-208ENST00000471250 Q6ZRG5 221 aa20.73■□□□□ 0.91
U2AF1-208ENST00000471250 C7orf69Q9H7B7 122 aa20.73■□□□□ 0.91
U2AF1-208ENST00000471250 TIMM9Q9Y5J7 89 aa20.73■□□□□ 0.91
U2AF1-208ENST00000471250 DOPEY2Q9Y3R5 2298 aa20.73■□□□□ 0.91
U2AF1-208ENST00000471250 TEX46H3BTG2 121 aa20.73■□□□□ 0.91
U2AF1-208ENST00000471250 PLGLAQ15195 96 aa20.73■□□□□ 0.91
U2AF1-208ENST00000471250 TUSC1Q2TAM9 212 aa20.73■□□□□ 0.91
U2AF1-208ENST00000471250 CENPVQ7Z7K6 275 aaPredicted RBP20.73■□□□□ 0.91
U2AF1-208ENST00000471250 FCN1O00602 326 aa20.72■□□□□ 0.91
U2AF1-208ENST00000471250 FGF7P21781 194 aa20.72■□□□□ 0.91
U2AF1-208ENST00000471250 BRS3P32247 399 aa20.72■□□□□ 0.91
U2AF1-208ENST00000471250 PRSS57Q6UWY2 283 aa20.72■□□□□ 0.91
U2AF1-208ENST00000471250 MRPL41Q8IXM3 137 aaKnown RBP20.72■□□□□ 0.91
U2AF1-208ENST00000471250 WDR83OSQ9Y284 106 aa20.72■□□□□ 0.91
U2AF1-208ENST00000471250 FBXO7Q9Y3I1 522 aa20.72■□□□□ 0.91
U2AF1-208ENST00000471250 TRAV40A0A0B4J280 105 aa20.71■□□□□ 0.91
U2AF1-208ENST00000471250 PRH1P02810 166 aa20.71■□□□□ 0.91
U2AF1-208ENST00000471250 CAMLGP49069 296 aa20.71■□□□□ 0.91
U2AF1-208ENST00000471250 SSBP2P81877 361 aaPredicted RBP20.71■□□□□ 0.91
U2AF1-208ENST00000471250 AANATQ16613 207 aa20.71■□□□□ 0.91
U2AF1-208ENST00000471250 AKR1C8PQ5T2L2 129 aa20.71■□□□□ 0.91
U2AF1-208ENST00000471250 RUSC1-AS1Q66K80 236 aa20.71■□□□□ 0.91
U2AF1-208ENST00000471250 BTNL8Q6UX41 500 aa20.71■□□□□ 0.91
U2AF1-208ENST00000471250 HSD17B13Q7Z5P4 300 aaPredicted RBP20.71■□□□□ 0.91
U2AF1-208ENST00000471250 RNF223E7ERA6 249 aa20.7■□□□□ 0.91
U2AF1-208ENST00000471250 TACC2O95359 2948 aa20.7■□□□□ 0.91
U2AF1-208ENST00000471250 FAM106CPP0CH98 169 aa20.7■□□□□ 0.91
U2AF1-208ENST00000471250 GNB1P62873 340 aa20.7■□□□□ 0.91
U2AF1-208ENST00000471250 SERF2P84101 59 aa20.7■□□□□ 0.91
U2AF1-208ENST00000471250 TENM4Q6N022 2769 aa20.7■□□□□ 0.9
U2AF1-208ENST00000471250 IGHV3OR16-10A0A075B7F0 116 aa20.7■□□□□ 0.9
U2AF1-208ENST00000471250 IGLC7A0M8Q6 106 aa20.7■□□□□ 0.9
U2AF1-208ENST00000471250 FNDC10F2Z333 226 aa20.7■□□□□ 0.9
U2AF1-208ENST00000471250 OR13C7P0DN81 318 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms