RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 HLA-DMBP28068 263 aa13.27□□□□□ -0.29
TTC28-205ENST00000469670 SLC25A24Q6NUK1 477 aa13.27□□□□□ -0.29
TTC28-205ENST00000469670 AIFM2Q9BRQ8 373 aa13.27□□□□□ -0.29
TTC28-205ENST00000469670 RHPN1-AS1Q9BWJ2 59 aa13.27□□□□□ -0.29
TTC28-205ENST00000469670 COMMD5Q9GZQ3 224 aa13.27□□□□□ -0.29
TTC28-205ENST00000469670 C21orf62Q9NYP8 219 aa13.27□□□□□ -0.29
TTC28-205ENST00000469670 IGHV3-21A0A0B4J1V1 117 aa13.26□□□□□ -0.29
TTC28-205ENST00000469670 TRAV3A0A0B4J244 114 aa13.26□□□□□ -0.29
TTC28-205ENST00000469670 M0R2N4 97 aa13.26□□□□□ -0.29
TTC28-205ENST00000469670 CHEK1O14757 476 aa13.26□□□□□ -0.29
TTC28-205ENST00000469670 PVRIGQ6DKI7 326 aa13.26□□□□□ -0.29
TTC28-205ENST00000469670 Q6ZTC4 211 aa13.26□□□□□ -0.29
TTC28-205ENST00000469670 GDPD1Q8N9F7 314 aa13.26□□□□□ -0.29
TTC28-205ENST00000469670 OR10W1Q8NGF6 305 aa13.26□□□□□ -0.29
TTC28-205ENST00000469670 ATP6V0BQ99437 205 aa13.26□□□□□ -0.29
TTC28-205ENST00000469670 IGHV7-4-1A0A0J9YVY3 117 aa13.25□□□□□ -0.29
TTC28-205ENST00000469670 C15orf61A6NNL5 157 aa13.25□□□□□ -0.29
TTC28-205ENST00000469670 F8W735 103 aaPredicted RBP13.25□□□□□ -0.29
TTC28-205ENST00000469670 UPK2O00526 184 aa13.25□□□□□ -0.29
TTC28-205ENST00000469670 RBMY1A1P0DJD3 496 aaKnown RBP13.25□□□□□ -0.29
TTC28-205ENST00000469670 RBMY1CP0DJD4 496 aa13.25□□□□□ -0.29
TTC28-205ENST00000469670 RAB6AP20340 208 aa13.25□□□□□ -0.29
TTC28-205ENST00000469670 RBMY1FQ15415 496 aaKnown RBP13.25□□□□□ -0.29
TTC28-205ENST00000469670 TRAM1Q15629 374 aa13.25□□□□□ -0.29
TTC28-205ENST00000469670 SPAG16Q8N0X2 631 aa13.25□□□□□ -0.29
TTC28-205ENST00000469670 GBGT1Q8N5D6 347 aa13.25□□□□□ -0.29
TTC28-205ENST00000469670 PACRGLQ8N7B6 248 aa13.25□□□□□ -0.29
TTC28-205ENST00000469670 POM121L12Q8N7R1 296 aa13.25□□□□□ -0.29
TTC28-205ENST00000469670 UBAC2Q8NBM4 344 aa13.25□□□□□ -0.29
TTC28-205ENST00000469670 TMEM116Q8NCL8 245 aa13.25□□□□□ -0.29
TTC28-205ENST00000469670 RNF126Q9BV68 326 aa13.25□□□□□ -0.29
TTC28-205ENST00000469670 QTRT1Q9BXR0 403 aaKnown RBP13.25□□□□□ -0.29
TTC28-205ENST00000469670 IGHV3-49A0A0A0MS15 119 aa13.24□□□□□ -0.29
TTC28-205ENST00000469670 IGHV4-28A0A0C4DH34 117 aa13.24□□□□□ -0.29
TTC28-205ENST00000469670 METTL21EPA6NDL7 271 aa13.24□□□□□ -0.29
TTC28-205ENST00000469670 PTGES3LE9PB15 166 aa13.24□□□□□ -0.29
TTC28-205ENST00000469670 TNFSF12O43508 249 aa13.24□□□□□ -0.29
TTC28-205ENST00000469670 OR13C7P0DN81 318 aa13.24□□□□□ -0.29
TTC28-205ENST00000469670 PSMA1P25786 263 aaKnown RBP13.24□□□□□ -0.29
TTC28-205ENST00000469670 CNIH2Q6PI25 160 aa13.24□□□□□ -0.29
TTC28-205ENST00000469670 CENPSQ8N2Z9 138 aa13.24□□□□□ -0.29
TTC28-205ENST00000469670 SCARB1Q8WTV0 552 aa13.24□□□□□ -0.29
TTC28-205ENST00000469670 CMTM3Q96MX0 182 aa13.24□□□□□ -0.29
TTC28-205ENST00000469670 C8orf4Q9NR00 106 aa13.24□□□□□ -0.29
TTC28-205ENST00000469670 PLA2G2EQ9NZK7 142 aa13.24□□□□□ -0.29
TTC28-205ENST00000469670 SERPINE2P07093 398 aa13.23□□□□□ -0.29
TTC28-205ENST00000469670 HSMCR30P0CW71 290 aa13.23□□□□□ -0.29
TTC28-205ENST00000469670 TAS2R31P59538 309 aa13.23□□□□□ -0.29
TTC28-205ENST00000469670 WT1-ASQ06250 92 aa13.23□□□□□ -0.29
TTC28-205ENST00000469670 ARL6IP1Q15041 203 aa13.23□□□□□ -0.29
TTC28-205ENST00000469670 CDNFQ49AH0 187 aa13.23□□□□□ -0.29
TTC28-205ENST00000469670 Q56UQ5 140 aa13.23□□□□□ -0.29
TTC28-205ENST00000469670 FAM90A2PQ658T7 463 aa13.23□□□□□ -0.29
TTC28-205ENST00000469670 ZNF575Q86XF7 245 aa13.23□□□□□ -0.29
TTC28-205ENST00000469670 RBFOX2O43251 390 aaKnown RBP eCLIP13.22□□□□□ -0.29
TTC28-205ENST00000469670 TRAPPC2P0DI81 140 aa13.22□□□□□ -0.29
TTC28-205ENST00000469670 TRAPPC2BP0DI82 140 aa13.22□□□□□ -0.29
TTC28-205ENST00000469670 P0DMU3 169 aa13.22□□□□□ -0.29
TTC28-205ENST00000469670 FAM231AP0DMU4 169 aa13.22□□□□□ -0.29
TTC28-205ENST00000469670 FAM231CP0DMU5 169 aa13.22□□□□□ -0.29
TTC28-205ENST00000469670 NQO2P16083 231 aa13.22□□□□□ -0.29
TTC28-205ENST00000469670 OR10A3P58181 314 aa13.22□□□□□ -0.29
TTC28-205ENST00000469670 PAFAH1B2P68402 229 aa13.22□□□□□ -0.29
TTC28-205ENST00000469670 FABP5Q01469 135 aa13.22□□□□□ -0.29
TTC28-205ENST00000469670 POU2AF1Q16633 256 aa13.22□□□□□ -0.29
TTC28-205ENST00000469670 THOC7Q6I9Y2 204 aaKnown RBP13.22□□□□□ -0.29
TTC28-205ENST00000469670 HSD17B13Q7Z5P4 300 aaPredicted RBP13.22□□□□□ -0.29
TTC28-205ENST00000469670 ZNF414Q96IQ9 312 aa13.22□□□□□ -0.29
TTC28-205ENST00000469670 DCSTAMPQ9H295 470 aa13.22□□□□□ -0.29
TTC28-205ENST00000469670 CCL28Q9NRJ3 127 aa13.22□□□□□ -0.29
TTC28-205ENST00000469670 F11RQ9Y624 299 aaKnown RBP13.22□□□□□ -0.29
TTC28-205ENST00000469670 IFITM5A6NNB3 132 aa13.21□□□□□ -0.29
TTC28-205ENST00000469670 K7EIM0 57 aa13.21□□□□□ -0.29
TTC28-205ENST00000469670 HPRT1P00492 218 aa13.21□□□□□ -0.29
TTC28-205ENST00000469670 AMBPP02760 352 aa13.21□□□□□ -0.29
TTC28-205ENST00000469670 CTSGP08311 255 aa13.21□□□□□ -0.29
TTC28-205ENST00000469670 FGF2P09038 288 aa13.21□□□□□ -0.29
TTC28-205ENST00000469670 MIFP14174 115 aa13.21□□□□□ -0.29
TTC28-205ENST00000469670 DEFB131AP59861 70 aa13.21□□□□□ -0.29
TTC28-205ENST00000469670 RELQ04864 619 aaPredicted RBP13.21□□□□□ -0.29
TTC28-205ENST00000469670 LGALS9BQ3B8N2 356 aa13.21□□□□□ -0.29
TTC28-205ENST00000469670 HACD4Q5VWC8 232 aa13.21□□□□□ -0.29
TTC28-205ENST00000469670 LEMD1Q68G75 181 aa13.21□□□□□ -0.29
TTC28-205ENST00000469670 OR10C1Q96KK4 312 aa13.21□□□□□ -0.29
TTC28-205ENST00000469670 ATG5Q9H1Y0 275 aa13.21□□□□□ -0.29
TTC28-205ENST00000469670 TMEM140Q9NV12 185 aa13.21□□□□□ -0.29
TTC28-205ENST00000469670 HSPG2P98160 4391 aa13.21□□□□□ -0.3
TTC28-205ENST00000469670 IGHV3OR16-13A0A075B7E8 117 aa13.2□□□□□ -0.3
TTC28-205ENST00000469670 ELOA3CA0A087WX78 387 aaPredicted RBP13.2□□□□□ -0.3
TTC28-205ENST00000469670 IGHV3-74A0A0B4J1X5 117 aa13.2□□□□□ -0.3
TTC28-205ENST00000469670 SULT1C2O00338 296 aa13.2□□□□□ -0.3
TTC28-205ENST00000469670 YIF1AO95070 293 aa13.2□□□□□ -0.3
TTC28-205ENST00000469670 TCF24Q7RTU0 167 aa13.2□□□□□ -0.3
TTC28-205ENST00000469670 DMBX1Q8NFW5 382 aa13.2□□□□□ -0.3
TTC28-205ENST00000469670 NUDCD2Q8WVJ2 157 aa13.2□□□□□ -0.3
TTC28-205ENST00000469670 SECTM1Q8WVN6 248 aa13.2□□□□□ -0.3
TTC28-205ENST00000469670 ANXA10Q9UJ72 324 aa13.2□□□□□ -0.3
TTC28-205ENST00000469670 DEFB131BA0A096LNP1 70 aa13.19□□□□□ -0.3
TTC28-205ENST00000469670 TRAV14DV4A0A0A6YYC5 116 aa13.19□□□□□ -0.3
TTC28-205ENST00000469670 TEX50A0A1B0GTY4 177 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms