RNA–Protein interactions for RNA: ENST00000465768.1

SAMM50-202, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 169 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-202ENST00000465768 HSPE1-MOB4S4R3N1 261 aa2.37□□□□□ -2.03
SAMM50-202ENST00000465768 TEP1Q99973 2627 aaKnown RBP2.37□□□□□ -2.03
SAMM50-202ENST00000465768 C2CD3Q4AC94 2353 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 CUBNO60494 3623 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 IGKV1D-17A0A075B6S4 117 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 IGKV1-27A0A075B6S5 117 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 CENPVL3A0A0U1RRI6 287 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 IRGMA1A4Y4 181 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 RFPL4AA6NLU0 287 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 OR2AT4A6NND4 320 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 ZNF879B4DU55 563 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 RFPL4AL1F8VTS6 287 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 H0YJX3 145 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 SNAI2O43623 268 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 NDUFB3O43676 98 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 SYNGR1O43759 233 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 ENSAO43768 121 aaKnown RBP2.36□□□□□ -2.03
SAMM50-202ENST00000465768 CLPXO76031 633 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 TSPAN13O95857 204 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 TFF1P04155 84 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 RPSAP08865 295 aaKnown RBP2.36□□□□□ -2.03
SAMM50-202ENST00000465768 HTR1AP08908 422 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 GNAO1P09471 354 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 UBCP0CG48 685 aaKnown RBP2.36□□□□□ -2.03
SAMM50-202ENST00000465768 PGA5P0DJD9 388 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 ATF1P18846 271 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 HRH1P35367 487 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 UBE2AP49459 152 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 ETV1P50549 477 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 GTF2A1P52655 376 aaPredicted RBP2.36□□□□□ -2.03
SAMM50-202ENST00000465768 CAV3P56539 151 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 FGF12P61328 243 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 ARF6P62330 175 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 ACTA2P62736 377 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 ACTG2P63267 376 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 ST3GAL4Q11206 333 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 RCN1Q15293 331 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 CCDC58Q4VC31 144 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 PLCXD3Q63HM9 321 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 STUMQ69YW2 141 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 XAF1Q6GPH4 301 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 RPL22L1Q6P5R6 122 aaKnown RBP2.36□□□□□ -2.03
SAMM50-202ENST00000465768 METAP1DQ6UB28 335 aaPredicted RBP2.36□□□□□ -2.03
SAMM50-202ENST00000465768 PCP2Q8IVA1 136 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 FAM216BQ8N7L0 139 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 ZDHHC22Q8N966 263 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 HSD17B11Q8NBQ5 300 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 OR51A4Q8NGJ6 313 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 OR10AC1Q8NH08 325 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 OR5AK2Q8NH90 309 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 RPS4Y2Q8TD47 263 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 HAVCR2Q8TDQ0 301 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 ZNF418Q8TF45 676 aaPredicted RBP2.36□□□□□ -2.03
SAMM50-202ENST00000465768 C22orf15Q8WYQ4 148 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 TNFRSF14Q92956 283 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 TMIGD2Q96BF3 282 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 MRPL48Q96GC5 212 aaKnown RBP2.36□□□□□ -2.03
SAMM50-202ENST00000465768 ZNF488Q96MN9 340 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 GAFA1Q96PS6 74 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 PDCD1LG2Q9BQ51 273 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 HES4Q9HCC6 221 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 BABAM2Q9NXR7 383 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 MTCH1Q9NZJ7 389 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 RPUSD1Q9UJJ7 312 aaKnown RBP2.36□□□□□ -2.03
SAMM50-202ENST00000465768 ZNF222Q9UK12 451 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 HHLA2Q9UM44 414 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 ING4Q9UNL4 249 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 SLC7A11Q9UPY5 501 aa2.36□□□□□ -2.03
SAMM50-202ENST00000465768 CAB39Q9Y376 341 aaPredicted RBP2.36□□□□□ -2.03
SAMM50-202ENST00000465768 SONP18583 2426 aaKnown RBP2.36□□□□□ -2.03
SAMM50-202ENST00000465768 SVEP1Q4LDE5 3571 aa2.35□□□□□ -2.03
SAMM50-202ENST00000465768 FLNAP21333 2647 aaKnown RBP2.35□□□□□ -2.03
SAMM50-202ENST00000465768 IGLV4-69A0A075B6H9 119 aa2.35□□□□□ -2.03
SAMM50-202ENST00000465768 TRAV40A0A0B4J280 105 aa2.35□□□□□ -2.03
SAMM50-202ENST00000465768 IGHV1-69DA0A0B4J2H0 117 aa2.35□□□□□ -2.03
SAMM50-202ENST00000465768 IGKV1-12A0A0C4DH73 117 aa2.35□□□□□ -2.03
SAMM50-202ENST00000465768 LOC107986453A0A1B0GWG9 222 aa2.35□□□□□ -2.03
SAMM50-202ENST00000465768 ERICH4A6NGS2 130 aa2.35□□□□□ -2.03
SAMM50-202ENST00000465768 TMEM212A6NML5 194 aa2.35□□□□□ -2.03
SAMM50-202ENST00000465768 CLDN34H7C241 214 aa2.35□□□□□ -2.03
SAMM50-202ENST00000465768 J3QT63 122 aa2.35□□□□□ -2.03
SAMM50-202ENST00000465768 PPP1R2P9O14990 202 aa2.35□□□□□ -2.03
SAMM50-202ENST00000465768 ZNF737O75373 536 aa2.35□□□□□ -2.03
SAMM50-202ENST00000465768 GATBO75879 557 aaKnown RBP2.35□□□□□ -2.03
SAMM50-202ENST00000465768 IGKV1D-12P01611 117 aa2.35□□□□□ -2.03
SAMM50-202ENST00000465768 IGHV1-69P01742 117 aa2.35□□□□□ -2.03
SAMM50-202ENST00000465768 PIPP12273 146 aaPredicted RBP2.35□□□□□ -2.03
SAMM50-202ENST00000465768 PRKACBP22694 351 aa2.35□□□□□ -2.03
SAMM50-202ENST00000465768 PRTN3P24158 256 aa2.35□□□□□ -2.03
SAMM50-202ENST00000465768 GABRA2P47869 451 aa2.35□□□□□ -2.03
SAMM50-202ENST00000465768 RBP2P50120 134 aa2.35□□□□□ -2.03
SAMM50-202ENST00000465768 RPS11P62280 158 aaKnown RBP eCLIP2.35□□□□□ -2.03
SAMM50-202ENST00000465768 KISS1Q15726 138 aa2.35□□□□□ -2.03
SAMM50-202ENST00000465768 DEFB112Q30KQ8 113 aa2.35□□□□□ -2.03
SAMM50-202ENST00000465768 ASCL4Q6XD76 172 aa2.35□□□□□ -2.03
SAMM50-202ENST00000465768 TMPRSS11AQ6ZMR5 421 aa2.35□□□□□ -2.03
SAMM50-202ENST00000465768 SLC25A26Q70HW3 274 aa2.35□□□□□ -2.03
SAMM50-202ENST00000465768 C8orf59Q8N0T1 100 aaPredicted RBP2.35□□□□□ -2.03
SAMM50-202ENST00000465768 ZNF561Q8N587 486 aa2.35□□□□□ -2.03
SAMM50-202ENST00000465768 SIGLECL1Q8N7X8 197 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms