RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 CD300CQ08708 224 aa11.32□□□□□ -0.6
COL6A1-202ENST00000463060 C19orf54Q5BKX5 351 aa11.32□□□□□ -0.6
COL6A1-202ENST00000463060 TCTE3Q8IZS6 198 aa11.32□□□□□ -0.6
COL6A1-202ENST00000463060 SRSF12Q8WXF0 261 aaKnown RBP11.32□□□□□ -0.6
COL6A1-202ENST00000463060 SRSF8Q9BRL6 282 aaKnown RBP11.32□□□□□ -0.6
COL6A1-202ENST00000463060 MAGT1Q9H0U3 335 aa11.32□□□□□ -0.6
COL6A1-202ENST00000463060 IGLC7A0M8Q6 106 aa11.31□□□□□ -0.6
COL6A1-202ENST00000463060 FAM181BA6NEQ2 426 aa11.31□□□□□ -0.6
COL6A1-202ENST00000463060 MSGN1A6NI15 193 aa11.31□□□□□ -0.6
COL6A1-202ENST00000463060 NXPH3O95157 252 aa11.31□□□□□ -0.6
COL6A1-202ENST00000463060 IFNA17P01571 189 aa11.31□□□□□ -0.6
COL6A1-202ENST00000463060 OPN1MWP04001 364 aa11.31□□□□□ -0.6
COL6A1-202ENST00000463060 IGF1P05019 195 aa11.31□□□□□ -0.6
COL6A1-202ENST00000463060 OPN1MW2P0DN77 364 aa11.31□□□□□ -0.6
COL6A1-202ENST00000463060 OPN1MW3P0DN78 364 aa11.31□□□□□ -0.6
COL6A1-202ENST00000463060 GNB1P62873 340 aa11.31□□□□□ -0.6
COL6A1-202ENST00000463060 ASPHD1Q5U4P2 390 aa11.31□□□□□ -0.6
COL6A1-202ENST00000463060 C11orf87Q6NUJ2 197 aa11.31□□□□□ -0.6
COL6A1-202ENST00000463060 AKAP14Q86UN6 197 aa11.31□□□□□ -0.6
COL6A1-202ENST00000463060 OR10W1Q8NGF6 305 aa11.31□□□□□ -0.6
COL6A1-202ENST00000463060 ARPC1AQ92747 370 aa11.31□□□□□ -0.6
COL6A1-202ENST00000463060 JMJD8Q96S16 334 aa11.31□□□□□ -0.6
COL6A1-202ENST00000463060 ZNF702PQ9H963 129 aa11.31□□□□□ -0.6
COL6A1-202ENST00000463060 ZNF580Q9UK33 172 aa11.31□□□□□ -0.6
COL6A1-202ENST00000463060 DEDDO75618 318 aa11.3□□□□□ -0.6
COL6A1-202ENST00000463060 ACTL6BO94805 426 aa11.3□□□□□ -0.6
COL6A1-202ENST00000463060 CNIH1O95406 144 aa11.3□□□□□ -0.6
COL6A1-202ENST00000463060 TAS2R30P59541 319 aa11.3□□□□□ -0.6
COL6A1-202ENST00000463060 WT1-ASQ06250 92 aa11.3□□□□□ -0.6
COL6A1-202ENST00000463060 BSXQ3C1V8 233 aa11.3□□□□□ -0.6
COL6A1-202ENST00000463060 KRTAP21-3Q3LHN1 58 aa11.3□□□□□ -0.6
COL6A1-202ENST00000463060 SPINK9Q5DT21 86 aa11.3□□□□□ -0.6
COL6A1-202ENST00000463060 OR2T35Q8NGX2 323 aa11.3□□□□□ -0.6
COL6A1-202ENST00000463060 SGMS2Q8NHU3 365 aa11.3□□□□□ -0.6
COL6A1-202ENST00000463060 SMIM8Q96KF7 97 aa11.3□□□□□ -0.6
COL6A1-202ENST00000463060 PRSS22Q9GZN4 317 aa11.3□□□□□ -0.6
COL6A1-202ENST00000463060 NPFFR1Q9GZQ6 430 aa11.3□□□□□ -0.6
COL6A1-202ENST00000463060 ZFP57Q9NU63 452 aa11.3□□□□□ -0.6
COL6A1-202ENST00000463060 ATP6V0E1O15342 81 aa11.29□□□□□ -0.6
COL6A1-202ENST00000463060 TCF21O43680 179 aa11.29□□□□□ -0.6
COL6A1-202ENST00000463060 MED6O75586 246 aa11.29□□□□□ -0.6
COL6A1-202ENST00000463060 TSPAN9O75954 239 aa11.29□□□□□ -0.6
COL6A1-202ENST00000463060 SCGB1D2O95969 90 aa11.29□□□□□ -0.6
COL6A1-202ENST00000463060 SLC25A4P12235 298 aa11.29□□□□□ -0.6
COL6A1-202ENST00000463060 KLK9Q2XQG4 91 aa11.29□□□□□ -0.6
COL6A1-202ENST00000463060 PVRIGQ6DKI7 326 aa11.29□□□□□ -0.6
COL6A1-202ENST00000463060 PRSS54Q6PEW0 395 aa11.29□□□□□ -0.6
COL6A1-202ENST00000463060 SLC35E3Q7Z769 313 aa11.29□□□□□ -0.6
COL6A1-202ENST00000463060 OR2C3Q8N628 320 aa11.29□□□□□ -0.6
COL6A1-202ENST00000463060 DTD1Q8TEA8 209 aa11.29□□□□□ -0.6
COL6A1-202ENST00000463060 RAB40CQ96S21 281 aa11.29□□□□□ -0.6
COL6A1-202ENST00000463060 FAM103A1Q9BTL3 118 aaKnown RBP11.29□□□□□ -0.6
COL6A1-202ENST00000463060 OR5AC2Q9NZP5 309 aa11.29□□□□□ -0.6
COL6A1-202ENST00000463060 KLK9Q9UKQ9 250 aa11.29□□□□□ -0.6
COL6A1-202ENST00000463060 LSM5Q9Y4Y9 91 aaKnown RBP11.29□□□□□ -0.6
COL6A1-202ENST00000463060 A0A1W2PN81 502 aa11.28□□□□□ -0.6
COL6A1-202ENST00000463060 CEBPZOSA8MTT3 80 aa11.28□□□□□ -0.6
COL6A1-202ENST00000463060 SMLR1H3BR10 107 aa11.28□□□□□ -0.6
COL6A1-202ENST00000463060 TRIM77I1YAP6 450 aa11.28□□□□□ -0.6
COL6A1-202ENST00000463060 WRBO00258 174 aa11.28□□□□□ -0.6
COL6A1-202ENST00000463060 KCNAB3O43448 404 aa11.28□□□□□ -0.6
COL6A1-202ENST00000463060 SSSCA1O60232 199 aa11.28□□□□□ -0.6
COL6A1-202ENST00000463060 LY86O95711 162 aa11.28□□□□□ -0.6
COL6A1-202ENST00000463060 CRYGCP07315 174 aa11.28□□□□□ -0.6
COL6A1-202ENST00000463060 AREGP15514 252 aa11.28□□□□□ -0.6
COL6A1-202ENST00000463060 CHRNA7P36544 502 aa11.28□□□□□ -0.6
COL6A1-202ENST00000463060 FGL1Q08830 312 aa11.28□□□□□ -0.6
COL6A1-202ENST00000463060 LRRC37A5PQ49AS3 106 aa11.28□□□□□ -0.6
COL6A1-202ENST00000463060 AKIRIN2Q53H80 203 aa11.28□□□□□ -0.6
COL6A1-202ENST00000463060 Q6ZSV7 163 aa11.28□□□□□ -0.6
COL6A1-202ENST00000463060 HSD17B13Q7Z5P4 300 aaPredicted RBP11.28□□□□□ -0.6
COL6A1-202ENST00000463060 TTC9CQ8N5M4 171 aa11.28□□□□□ -0.6
COL6A1-202ENST00000463060 LFNGQ8NES3 379 aa11.28□□□□□ -0.6
COL6A1-202ENST00000463060 GRPEL2Q8TAA5 225 aa11.28□□□□□ -0.6
COL6A1-202ENST00000463060 TMEM170AQ8WVE7 144 aa11.28□□□□□ -0.6
COL6A1-202ENST00000463060 HINT2Q9BX68 163 aa11.28□□□□□ -0.6
COL6A1-202ENST00000463060 PLEKHA3Q9HB20 300 aa11.28□□□□□ -0.6
COL6A1-202ENST00000463060 WSB1Q9Y6I7 421 aa11.28□□□□□ -0.6
COL6A1-202ENST00000463060 RLN2P04090 185 aa11.27□□□□□ -0.61
COL6A1-202ENST00000463060 IAPPP10997 89 aa11.27□□□□□ -0.61
COL6A1-202ENST00000463060 CTRB1P17538 263 aa11.27□□□□□ -0.61
COL6A1-202ENST00000463060 PPIFP30405 207 aaKnown RBP11.27□□□□□ -0.61
COL6A1-202ENST00000463060 S100A10P60903 97 aa11.27□□□□□ -0.61
COL6A1-202ENST00000463060 CTRB2Q6GPI1 263 aa11.27□□□□□ -0.61
COL6A1-202ENST00000463060 TMEM65Q6PI78 240 aa11.27□□□□□ -0.61
COL6A1-202ENST00000463060 OR11H4Q8NGC9 324 aa11.27□□□□□ -0.61
COL6A1-202ENST00000463060 TMEM68Q96MH6 324 aa11.27□□□□□ -0.61
COL6A1-202ENST00000463060 CIB3Q96Q77 187 aaPredicted RBP11.27□□□□□ -0.61
COL6A1-202ENST00000463060 C16orf95Q9H693 158 aa11.27□□□□□ -0.61
COL6A1-202ENST00000463060 HEYLQ9NQ87 328 aaPredicted RBP11.27□□□□□ -0.61
COL6A1-202ENST00000463060 PARP11Q9NR21 331 aa11.27□□□□□ -0.61
COL6A1-202ENST00000463060 SERTAD4Q9NUC0 356 aa11.27□□□□□ -0.61
COL6A1-202ENST00000463060 DNHD1Q96M86 4753 aa11.26□□□□□ -0.61
COL6A1-202ENST00000463060 C15orf62A8K5M9 175 aa11.26□□□□□ -0.61
COL6A1-202ENST00000463060 NPIPB5A8MRT5 1133 aa11.26□□□□□ -0.61
COL6A1-202ENST00000463060 E5RGE8 158 aa11.26□□□□□ -0.61
COL6A1-202ENST00000463060 G3V318 75 aa11.26□□□□□ -0.61
COL6A1-202ENST00000463060 AP4M1O00189 453 aa11.26□□□□□ -0.61
COL6A1-202ENST00000463060 C1QBP02746 253 aa11.26□□□□□ -0.61
COL6A1-202ENST00000463060 OR13C7P0DN81 318 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms