RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 CSMD3Q7Z407 3707 aa11.69□□□□□ -0.54
NUP50-213ENST00000461437 FAM25AB3EWG3 89 aa11.68□□□□□ -0.54
NUP50-213ENST00000461437 FAM25CB3EWG5 89 aa11.68□□□□□ -0.54
NUP50-213ENST00000461437 FAM25GB3EWG6 89 aa11.68□□□□□ -0.54
NUP50-213ENST00000461437 C3orf84H3BNL1 204 aa11.68□□□□□ -0.54
NUP50-213ENST00000461437 DHFRP00374 187 aa11.68□□□□□ -0.54
NUP50-213ENST00000461437 APOA1P02647 267 aa11.68□□□□□ -0.54
NUP50-213ENST00000461437 TRAPPC2P0DI81 140 aa11.68□□□□□ -0.54
NUP50-213ENST00000461437 TRAPPC2BP0DI82 140 aa11.68□□□□□ -0.54
NUP50-213ENST00000461437 HIST1H1BP16401 226 aaKnown RBP11.68□□□□□ -0.54
NUP50-213ENST00000461437 CBLN1P23435 193 aa11.68□□□□□ -0.54
NUP50-213ENST00000461437 TSPAN5P62079 268 aa11.68□□□□□ -0.54
NUP50-213ENST00000461437 KLK9Q2XQG4 91 aa11.68□□□□□ -0.54
NUP50-213ENST00000461437 CASC10Q5T4H9 136 aa11.68□□□□□ -0.54
NUP50-213ENST00000461437 GPHB5Q86YW7 130 aa11.68□□□□□ -0.54
NUP50-213ENST00000461437 ZNF502Q8TBZ5 544 aa11.68□□□□□ -0.54
NUP50-213ENST00000461437 CD300LFQ8TDQ1 290 aa11.68□□□□□ -0.54
NUP50-213ENST00000461437 AIFM2Q9BRQ8 373 aa11.68□□□□□ -0.54
NUP50-213ENST00000461437 MLXQ9UH92 298 aa11.68□□□□□ -0.54
NUP50-213ENST00000461437 KLK9Q9UKQ9 250 aa11.68□□□□□ -0.54
NUP50-213ENST00000461437 SMIM31A0A1B0GVY4 71 aa11.67□□□□□ -0.54
NUP50-213ENST00000461437 LGALS9O00182 355 aa11.67□□□□□ -0.54
NUP50-213ENST00000461437 SCAF4O95104 1147 aaKnown RBP11.67□□□□□ -0.54
NUP50-213ENST00000461437 CTF1Q16619 201 aa11.67□□□□□ -0.54
NUP50-213ENST00000461437 FAM209BQ5JX69 171 aa11.67□□□□□ -0.54
NUP50-213ENST00000461437 GPR107Q5VW38 600 aa11.67□□□□□ -0.54
NUP50-213ENST00000461437 SLC25A24Q6NUK1 477 aa11.67□□□□□ -0.54
NUP50-213ENST00000461437 BTNL8Q6UX41 500 aa11.67□□□□□ -0.54
NUP50-213ENST00000461437 TBC1D26Q86UD7 250 aa11.67□□□□□ -0.54
NUP50-213ENST00000461437 TMEM61Q8N0U2 210 aa11.67□□□□□ -0.54
NUP50-213ENST00000461437 OR2K2Q8NGT1 345 aa11.67□□□□□ -0.54
NUP50-213ENST00000461437 OR51B2Q9Y5P1 312 aa11.67□□□□□ -0.54
NUP50-213ENST00000461437 IGHV3OR16-8A0A075B7F1 116 aa11.66□□□□□ -0.54
NUP50-213ENST00000461437 RBMY1BA6NDE4 496 aaKnown RBP11.66□□□□□ -0.54
NUP50-213ENST00000461437 RBMY1EA6NEQ0 496 aaKnown RBP11.66□□□□□ -0.54
NUP50-213ENST00000461437 OR2T8A6NH00 312 aa11.66□□□□□ -0.54
NUP50-213ENST00000461437 IGKV1-39P01597 117 aa11.66□□□□□ -0.54
NUP50-213ENST00000461437 IGKV1D-39P04432 117 aa11.66□□□□□ -0.54
NUP50-213ENST00000461437 RBMY1DP0C7P1 496 aaKnown RBP11.66□□□□□ -0.54
NUP50-213ENST00000461437 PI3P19957 117 aa11.66□□□□□ -0.54
NUP50-213ENST00000461437 RCVRNP35243 200 aa11.66□□□□□ -0.54
NUP50-213ENST00000461437 RORCP51449 518 aa11.66□□□□□ -0.54
NUP50-213ENST00000461437 IZUMO4Q1ZYL8 232 aa11.66□□□□□ -0.54
NUP50-213ENST00000461437 CMTM1Q8IZ96 169 aa11.66□□□□□ -0.54
NUP50-213ENST00000461437 GDPD1Q8N9F7 314 aa11.66□□□□□ -0.54
NUP50-213ENST00000461437 UXS1Q8NBZ7 420 aa11.66□□□□□ -0.54
NUP50-213ENST00000461437 OR1L8Q8NGR8 309 aa11.66□□□□□ -0.54
NUP50-213ENST00000461437 BORCS5Q969J3 196 aa11.66□□□□□ -0.54
NUP50-213ENST00000461437 CXorf58Q96LI9 332 aa11.66□□□□□ -0.54
NUP50-213ENST00000461437 CITED4Q96RK1 184 aa11.66□□□□□ -0.54
NUP50-213ENST00000461437 SRD5A3Q9H8P0 318 aa11.66□□□□□ -0.54
NUP50-213ENST00000461437 EDA2RQ9HAV5 297 aa11.66□□□□□ -0.54
NUP50-213ENST00000461437 NDUFA4L2Q9NRX3 87 aa11.66□□□□□ -0.54
NUP50-213ENST00000461437 KLK11Q9UBX7 282 aa11.66□□□□□ -0.54
NUP50-213ENST00000461437 TRBV7-1A0A0A6YYK4 115 aa11.65□□□□□ -0.54
NUP50-213ENST00000461437 TPPPO94811 219 aa11.65□□□□□ -0.54
NUP50-213ENST00000461437 GABARAPO95166 117 aa11.65□□□□□ -0.54
NUP50-213ENST00000461437 SERPINE2P07093 398 aa11.65□□□□□ -0.54
NUP50-213ENST00000461437 FAM106AQ4KMX7 169 aa11.65□□□□□ -0.54
NUP50-213ENST00000461437 SPINK9Q5DT21 86 aa11.65□□□□□ -0.54
NUP50-213ENST00000461437 PLET1Q6UQ28 207 aa11.65□□□□□ -0.54
NUP50-213ENST00000461437 OR52I2Q8NH67 350 aa11.65□□□□□ -0.54
NUP50-213ENST00000461437 SPATA25Q9BR10 227 aa11.65□□□□□ -0.54
NUP50-213ENST00000461437 SCPEP1Q9HB40 452 aa11.65□□□□□ -0.54
NUP50-213ENST00000461437 SLC2A8Q9NY64 477 aa11.65□□□□□ -0.54
NUP50-213ENST00000461437 EXTL2Q9UBQ6 330 aa11.65□□□□□ -0.54
NUP50-213ENST00000461437 CEPT1Q9Y6K0 416 aa11.65□□□□□ -0.54
NUP50-213ENST00000461437 TENM2Q9NT68 2774 aa11.65□□□□□ -0.54
NUP50-213ENST00000461437 LYSTQ99698 3801 aa11.65□□□□□ -0.54
NUP50-213ENST00000461437 A8MWP6 167 aa11.64□□□□□ -0.55
NUP50-213ENST00000461437 OR11H12B2RN74 326 aa11.64□□□□□ -0.55
NUP50-213ENST00000461437 ZNF207O43670 478 aaKnown RBP11.64□□□□□ -0.55
NUP50-213ENST00000461437 SNAPC5O75971 98 aa11.64□□□□□ -0.55
NUP50-213ENST00000461437 PTBP1P26599 531 aaKnown RBP eCLIP11.64□□□□□ -0.55
NUP50-213ENST00000461437 ZNF57Q68EA5 555 aaPredicted RBP11.64□□□□□ -0.55
NUP50-213ENST00000461437 LINC00322Q6ZN03 302 aaPredicted RBP11.64□□□□□ -0.55
NUP50-213ENST00000461437 UBAC2Q8NBM4 344 aa11.64□□□□□ -0.55
NUP50-213ENST00000461437 LSM10Q969L4 123 aaKnown RBP11.64□□□□□ -0.55
NUP50-213ENST00000461437 MRGPRFQ96AM1 343 aa11.64□□□□□ -0.55
NUP50-213ENST00000461437 CMTM3Q96MX0 182 aa11.64□□□□□ -0.55
NUP50-213ENST00000461437 SRSF8Q9BRL6 282 aaKnown RBP11.64□□□□□ -0.55
NUP50-213ENST00000461437 CHRDL1Q9BU40 450 aa11.64□□□□□ -0.55
NUP50-213ENST00000461437 F11RQ9Y624 299 aaKnown RBP11.64□□□□□ -0.55
NUP50-213ENST00000461437 C15orf61A6NNL5 157 aa11.63□□□□□ -0.55
NUP50-213ENST00000461437 F8W735 103 aaPredicted RBP11.63□□□□□ -0.55
NUP50-213ENST00000461437 TGOLN2O43493 480 aa11.63□□□□□ -0.55
NUP50-213ENST00000461437 IGHV3-48P01763 117 aa11.63□□□□□ -0.55
NUP50-213ENST00000461437 CD3DP04234 171 aa11.63□□□□□ -0.55
NUP50-213ENST00000461437 LYL1P12980 280 aa11.63□□□□□ -0.55
NUP50-213ENST00000461437 PPP5CP53041 499 aa11.63□□□□□ -0.55
NUP50-213ENST00000461437 OR4D10Q8NGI6 311 aa11.63□□□□□ -0.55
NUP50-213ENST00000461437 SEC22AQ96IW7 307 aa11.63□□□□□ -0.55
NUP50-213ENST00000461437 ABHD1Q96SE0 405 aa11.63□□□□□ -0.55
NUP50-213ENST00000461437 MIXL1Q9H2W2 232 aa11.63□□□□□ -0.55
NUP50-213ENST00000461437 HIPK2Q9H2X6 1198 aa11.63□□□□□ -0.55
NUP50-213ENST00000461437 PALMDQ9NP74 551 aa11.63□□□□□ -0.55
NUP50-213ENST00000461437 TECRQ9NZ01 308 aaKnown RBP11.63□□□□□ -0.55
NUP50-213ENST00000461437 K7EIM0 57 aa11.62□□□□□ -0.55
NUP50-213ENST00000461437 PGAM2P15259 253 aa11.62□□□□□ -0.55
NUP50-213ENST00000461437 ZNF182P17025 639 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms