RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 BGLAPP02818 100 aa5.29□□□□□ -1.56
HLA-DQA1-205ENST00000460633 IGLV3-21P80748 117 aaPredicted RBP5.29□□□□□ -1.56
HLA-DQA1-205ENST00000460633 HERPUD1Q15011 391 aa5.29□□□□□ -1.56
HLA-DQA1-205ENST00000460633 CEACAM21Q3KPI0 293 aa5.29□□□□□ -1.56
HLA-DQA1-205ENST00000460633 ZNF672Q499Z4 452 aaPredicted RBP5.29□□□□□ -1.56
HLA-DQA1-205ENST00000460633 TMEM52Q8NDY8 209 aa5.29□□□□□ -1.56
HLA-DQA1-205ENST00000460633 PRELID3AQ96N28 172 aa5.29□□□□□ -1.56
HLA-DQA1-205ENST00000460633 CCL28Q9NRJ3 127 aa5.29□□□□□ -1.56
HLA-DQA1-205ENST00000460633 CACNA1CQ13936 2221 aa5.29□□□□□ -1.56
HLA-DQA1-205ENST00000460633 CKAP5Q14008 2032 aa5.29□□□□□ -1.56
HLA-DQA1-205ENST00000460633 TRGV4A0A0C4DH28 118 aa5.29□□□□□ -1.56
HLA-DQA1-205ENST00000460633 CDIPTO14735 213 aa5.29□□□□□ -1.56
HLA-DQA1-205ENST00000460633 SLC25A20O43772 301 aa5.29□□□□□ -1.56
HLA-DQA1-205ENST00000460633 BPIFA4PQ86YQ2 179 aa5.29□□□□□ -1.56
HLA-DQA1-205ENST00000460633 CLUHP3Q96NS8 147 aa5.29□□□□□ -1.56
HLA-DQA1-205ENST00000460633 RNF5Q99942 180 aa5.29□□□□□ -1.56
HLA-DQA1-205ENST00000460633 PRDM13Q9H4Q3 707 aa5.29□□□□□ -1.56
HLA-DQA1-205ENST00000460633 OR51B2Q9Y5P1 312 aa5.29□□□□□ -1.56
HLA-DQA1-205ENST00000460633 NYNRINQ9P2P1 1898 aaKnown RBP5.29□□□□□ -1.56
HLA-DQA1-205ENST00000460633 CDS2O95674 445 aa5.29□□□□□ -1.56
HLA-DQA1-205ENST00000460633 FSTP19883 344 aa5.29□□□□□ -1.56
HLA-DQA1-205ENST00000460633 RPL24P83731 157 aaKnown RBP5.29□□□□□ -1.56
HLA-DQA1-205ENST00000460633 C3orf36Q3SXR2 165 aa5.29□□□□□ -1.56
HLA-DQA1-205ENST00000460633 LPAR5Q9H1C0 372 aa5.29□□□□□ -1.56
HLA-DQA1-205ENST00000460633 DOCK4Q8N1I0 1966 aa5.29□□□□□ -1.56
HLA-DQA1-205ENST00000460633 C5orf52A6NGY3 159 aa5.29□□□□□ -1.56
HLA-DQA1-205ENST00000460633 CAMPP49913 170 aa5.29□□□□□ -1.56
HLA-DQA1-205ENST00000460633 Q0VFX4 171 aa5.29□□□□□ -1.56
HLA-DQA1-205ENST00000460633 TMEM183AQ8IXX5 376 aa5.29□□□□□ -1.56
HLA-DQA1-205ENST00000460633 OR10W1Q8NGF6 305 aa5.29□□□□□ -1.56
HLA-DQA1-205ENST00000460633 RNF133Q8WVZ7 376 aa5.29□□□□□ -1.56
HLA-DQA1-205ENST00000460633 ZNF48Q96MX3 618 aaPredicted RBP5.29□□□□□ -1.56
HLA-DQA1-205ENST00000460633 RSG1Q9BU20 258 aa5.29□□□□□ -1.56
HLA-DQA1-205ENST00000460633 IGKV1-8A0A0C4DH67 115 aa5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 F8WEM9 126 aa5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 CEACAM4O75871 244 aa5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 IGHMP01871 453 aa5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 ZNF708P17019 499 aa5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 PEBP1P30086 187 aaKnown RBP5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 PIGYQ3MUY2 71 aa5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 MRPL54Q6P161 138 aaKnown RBP5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 MYOZ3Q8TDC0 251 aa5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 NEU1Q99519 415 aa5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 TNFRSF18Q9Y5U5 241 aa5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 PXMP4Q9Y6I8 212 aa5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 SOD3P08294 240 aa5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 COX6CP09669 75 aa5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 CCL3L1P16619 93 aa5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 BCL3P20749 454 aa5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 SERF2P84101 59 aa5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 JOSD1Q15040 202 aaPredicted RBP5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 TMEM252Q8N6L7 170 aa5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 SMIM8Q96KF7 97 aa5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 NXT2Q9NPJ8 142 aaKnown RBP5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 COL4A3Q01955 1670 aa5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 PLXNA2O75051 1894 aa5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 TRAV40A0A0B4J280 105 aa5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 RBMY1BA6NDE4 496 aaKnown RBP5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 RBMY1EA6NEQ0 496 aaKnown RBP5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 COLCA2A8K830 154 aa5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 KBTBD11O94819 623 aa5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 RBMY1DP0C7P1 496 aaKnown RBP5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 RBMY1A1P0DJD3 496 aaKnown RBP5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 RBMY1CP0DJD4 496 aa5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 SMIM10L1P0DMW3 83 aa5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 CGB7P0DN87 165 aa5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 CLDN18P56856 261 aa5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 UBE2L3P68036 154 aaKnown RBP5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 SH2D6Q7Z4S9 175 aa5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 SMIM10Q96HG1 83 aa5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 TM2D2Q9BX73 214 aa5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 TSSC4Q9Y5U2 329 aaPredicted RBP5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 MUC22E2RYF6 1773 aaPredicted RBP5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 C4orf51C9J302 202 aa5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 PATE4P0C8F1 98 aa5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 RPS11P62280 158 aaKnown RBP eCLIP5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 LY6G6FQ5SQ64 297 aa5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 TSKUQ8WUA8 353 aa5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 FAM60AQ9NP50 221 aa5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 CALYQ9NYX4 217 aa5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 LINC00312Q9Y6C7 94 aa5.28□□□□□ -1.56
HLA-DQA1-205ENST00000460633 TMEM189A5PLL7 270 aa5.27□□□□□ -1.57
HLA-DQA1-205ENST00000460633 FAM223BA6NKX1 122 aa5.27□□□□□ -1.57
HLA-DQA1-205ENST00000460633 DEFB108AA8MXU0 73 aa5.27□□□□□ -1.57
HLA-DQA1-205ENST00000460633 PDE6DO43924 150 aa5.27□□□□□ -1.57
HLA-DQA1-205ENST00000460633 RAMP1O60894 148 aa5.27□□□□□ -1.57
HLA-DQA1-205ENST00000460633 WNT5AP41221 380 aa5.27□□□□□ -1.57
HLA-DQA1-205ENST00000460633 GATA4P43694 442 aa5.27□□□□□ -1.57
HLA-DQA1-205ENST00000460633 SUCLG1P53597 346 aaKnown RBP5.27□□□□□ -1.57
HLA-DQA1-205ENST00000460633 C1orf100Q5SVJ3 147 aa5.27□□□□□ -1.57
HLA-DQA1-205ENST00000460633 ATP1A1-AS1Q5TC04 95 aa5.27□□□□□ -1.57
HLA-DQA1-205ENST00000460633 SPATA31B1PQ5VZV4 182 aa5.27□□□□□ -1.57
HLA-DQA1-205ENST00000460633 FAM223AQ8IWN6 122 aa5.27□□□□□ -1.57
HLA-DQA1-205ENST00000460633 TMEM86BQ8N661 226 aa5.27□□□□□ -1.57
HLA-DQA1-205ENST00000460633 BEND2Q8NDZ0 799 aa5.27□□□□□ -1.57
HLA-DQA1-205ENST00000460633 SDF2L1Q9HCN8 221 aa5.27□□□□□ -1.57
HLA-DQA1-205ENST00000460633 COL5A1P20908 1838 aaPredicted RBP5.27□□□□□ -1.57
HLA-DQA1-205ENST00000460633 IGKV3-7A0A075B6H7 116 aa5.27□□□□□ -1.57
HLA-DQA1-205ENST00000460633 IGHV3OR15-7A0A075B7D8 119 aa5.27□□□□□ -1.57
HLA-DQA1-205ENST00000460633 MEX3AA1L020 520 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms