RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 H0Y980 276 aa12.28□□□□□ -0.44
COL7A1-203ENST00000459756 GGCTO75223 188 aaKnown RBP12.28□□□□□ -0.44
COL7A1-203ENST00000459756 SNAPC5O75971 98 aa12.28□□□□□ -0.44
COL7A1-203ENST00000459756 TRAPPC2P0DI81 140 aa12.28□□□□□ -0.44
COL7A1-203ENST00000459756 TRAPPC2BP0DI82 140 aa12.28□□□□□ -0.44
COL7A1-203ENST00000459756 FAAP20Q6NZ36 180 aa12.28□□□□□ -0.44
COL7A1-203ENST00000459756 TBC1D26Q86UD7 250 aa12.28□□□□□ -0.44
COL7A1-203ENST00000459756 ARRDC1Q8N5I2 433 aa12.28□□□□□ -0.44
COL7A1-203ENST00000459756 OR1L8Q8NGR8 309 aa12.28□□□□□ -0.44
COL7A1-203ENST00000459756 EEF1AKMT3Q96AZ1 226 aa12.28□□□□□ -0.44
COL7A1-203ENST00000459756 RABL2AQ9UBK7 228 aaPredicted RBP12.28□□□□□ -0.44
COL7A1-203ENST00000459756 RABL2BQ9UNT1 228 aa12.28□□□□□ -0.44
COL7A1-203ENST00000459756 DMRT1Q9Y5R6 373 aa12.28□□□□□ -0.44
COL7A1-203ENST00000459756 TEX50A0A1B0GTY4 177 aa12.27□□□□□ -0.45
COL7A1-203ENST00000459756 PPP5D1E7EU14 171 aa12.27□□□□□ -0.45
COL7A1-203ENST00000459756 CTDSPLO15194 276 aa12.27□□□□□ -0.45
COL7A1-203ENST00000459756 CYB5BO43169 146 aa12.27□□□□□ -0.45
COL7A1-203ENST00000459756 G6PCP35575 357 aa12.27□□□□□ -0.45
COL7A1-203ENST00000459756 TAS2R19P59542 299 aa12.27□□□□□ -0.45
COL7A1-203ENST00000459756 SPANXN2Q5MJ10 180 aa12.27□□□□□ -0.45
COL7A1-203ENST00000459756 CCDC190Q86UF4 302 aa12.27□□□□□ -0.45
COL7A1-203ENST00000459756 OR4D10Q8NGI6 311 aa12.27□□□□□ -0.45
COL7A1-203ENST00000459756 CXorf58Q96LI9 332 aa12.27□□□□□ -0.45
COL7A1-203ENST00000459756 CCDC140Q96MF4 163 aa12.27□□□□□ -0.45
COL7A1-203ENST00000459756 THYN1Q9P016 225 aa12.27□□□□□ -0.45
COL7A1-203ENST00000459756 PRNDQ9UKY0 176 aa12.27□□□□□ -0.45
COL7A1-203ENST00000459756 TRBV7-1A0A0A6YYK4 115 aa12.26□□□□□ -0.45
COL7A1-203ENST00000459756 RAB3DO95716 219 aa12.26□□□□□ -0.45
COL7A1-203ENST00000459756 PTBP1P26599 531 aaKnown RBP eCLIP12.26□□□□□ -0.45
COL7A1-203ENST00000459756 ARL3P36405 182 aa12.26□□□□□ -0.45
COL7A1-203ENST00000459756 SSBP1Q04837 148 aaKnown RBP12.26□□□□□ -0.45
COL7A1-203ENST00000459756 ZNF79Q15937 498 aa12.26□□□□□ -0.45
COL7A1-203ENST00000459756 SCGB2B2Q4G0G5 96 aa12.26□□□□□ -0.45
COL7A1-203ENST00000459756 LCN12Q6JVE5 192 aa12.26□□□□□ -0.45
COL7A1-203ENST00000459756 STEAP1BQ6NZ63 245 aa12.26□□□□□ -0.45
COL7A1-203ENST00000459756 CLEC19AQ6UXS0 136 aa12.26□□□□□ -0.45
COL7A1-203ENST00000459756 LHFPL1Q86WI0 220 aa12.26□□□□□ -0.45
COL7A1-203ENST00000459756 GPHB5Q86YW7 130 aa12.26□□□□□ -0.45
COL7A1-203ENST00000459756 Q8N402 240 aa12.26□□□□□ -0.45
COL7A1-203ENST00000459756 GDPD1Q8N9F7 314 aa12.26□□□□□ -0.45
COL7A1-203ENST00000459756 TMEM229BQ8NBD8 167 aa12.26□□□□□ -0.45
COL7A1-203ENST00000459756 OR10W1Q8NGF6 305 aa12.26□□□□□ -0.45
COL7A1-203ENST00000459756 ZNF486Q96H40 463 aaPredicted RBP12.26□□□□□ -0.45
COL7A1-203ENST00000459756 TSC22D3Q99576 134 aa12.26□□□□□ -0.45
COL7A1-203ENST00000459756 SOSTQ9BQB4 213 aa12.26□□□□□ -0.45
COL7A1-203ENST00000459756 BATF3Q9NR55 127 aa12.26□□□□□ -0.45
COL7A1-203ENST00000459756 NDUFA4L2Q9NRX3 87 aa12.26□□□□□ -0.45
COL7A1-203ENST00000459756 FKBP11Q9NYL4 201 aa12.26□□□□□ -0.45
COL7A1-203ENST00000459756 OR51B2Q9Y5P1 312 aa12.26□□□□□ -0.45
COL7A1-203ENST00000459756 U3KQK5 164 aa12.26□□□□□ -0.45
COL7A1-203ENST00000459756 LGALS9O00182 355 aa12.25□□□□□ -0.45
COL7A1-203ENST00000459756 GSTZ1O43708 216 aaPredicted RBP12.25□□□□□ -0.45
COL7A1-203ENST00000459756 OR2C1O95371 312 aa12.25□□□□□ -0.45
COL7A1-203ENST00000459756 IGHV3-23P01764 117 aa12.25□□□□□ -0.45
COL7A1-203ENST00000459756 SERPINE2P07093 398 aa12.25□□□□□ -0.45
COL7A1-203ENST00000459756 OR13C7P0DN81 318 aa12.25□□□□□ -0.45
COL7A1-203ENST00000459756 PGAM2P15259 253 aa12.25□□□□□ -0.45
COL7A1-203ENST00000459756 MECP2P51608 486 aaKnown RBP12.25□□□□□ -0.45
COL7A1-203ENST00000459756 PPP5CP53041 499 aa12.25□□□□□ -0.45
COL7A1-203ENST00000459756 RND3P61587 244 aa12.25□□□□□ -0.45
COL7A1-203ENST00000459756 WT1-ASQ06250 92 aa12.25□□□□□ -0.45
COL7A1-203ENST00000459756 OR2K2Q8NGT1 345 aa12.25□□□□□ -0.45
COL7A1-203ENST00000459756 OR5B3Q8NH48 314 aa12.25□□□□□ -0.45
COL7A1-203ENST00000459756 LSM10Q969L4 123 aaKnown RBP12.25□□□□□ -0.45
COL7A1-203ENST00000459756 ASCL2Q99929 193 aa12.25□□□□□ -0.45
COL7A1-203ENST00000459756 THAP7Q9BT49 309 aaPredicted RBP12.25□□□□□ -0.45
COL7A1-203ENST00000459756 TMEM14BQ9NUH8 114 aa12.25□□□□□ -0.45
COL7A1-203ENST00000459756 S4R3C0 116 aa12.25□□□□□ -0.45
COL7A1-203ENST00000459756 MFSD2BA6NFX1 497 aa12.24□□□□□ -0.45
COL7A1-203ENST00000459756 HLA-AP01891 365 aaKnown RBP12.24□□□□□ -0.45
COL7A1-203ENST00000459756 CD74P04233 296 aa12.24□□□□□ -0.45
COL7A1-203ENST00000459756 FRMD6-AS1P0C7T7 363 aa12.24□□□□□ -0.45
COL7A1-203ENST00000459756 Q8N1Y9 231 aa12.24□□□□□ -0.45
COL7A1-203ENST00000459756 TERB2Q8NHR7 220 aa12.24□□□□□ -0.45
COL7A1-203ENST00000459756 SEC22AQ96IW7 307 aa12.24□□□□□ -0.45
COL7A1-203ENST00000459756 TMEM56Q96MV1 263 aa12.24□□□□□ -0.45
COL7A1-203ENST00000459756 WWC2-AS2Q96NR7 200 aa12.24□□□□□ -0.45
COL7A1-203ENST00000459756 HINT2Q9BX68 163 aa12.24□□□□□ -0.45
COL7A1-203ENST00000459756 NSG2Q9Y328 171 aa12.24□□□□□ -0.45
COL7A1-203ENST00000459756 C15orf61A6NNL5 157 aa12.23□□□□□ -0.45
COL7A1-203ENST00000459756 CLEC3BP05452 202 aa12.23□□□□□ -0.45
COL7A1-203ENST00000459756 AKAIN1P0CW23 69 aa12.23□□□□□ -0.45
COL7A1-203ENST00000459756 PIGPP57054 158 aa12.23□□□□□ -0.45
COL7A1-203ENST00000459756 FAM106AQ4KMX7 169 aa12.23□□□□□ -0.45
COL7A1-203ENST00000459756 H2BFWTQ7Z2G1 175 aa12.23□□□□□ -0.45
COL7A1-203ENST00000459756 SGPP2Q8IWX5 399 aa12.23□□□□□ -0.45
COL7A1-203ENST00000459756 OR4C16Q8NGL9 310 aa12.23□□□□□ -0.45
COL7A1-203ENST00000459756 ZNF502Q8TBZ5 544 aa12.23□□□□□ -0.45
COL7A1-203ENST00000459756 VN1R17PQ8TDU5 208 aa12.23□□□□□ -0.45
COL7A1-203ENST00000459756 F11RQ9Y624 299 aaKnown RBP12.23□□□□□ -0.45
COL7A1-203ENST00000459756 TENM3Q9P273 2699 aa12.23□□□□□ -0.45
COL7A1-203ENST00000459756 ANKRD20A5PA0PJZ0 165 aa12.22□□□□□ -0.45
COL7A1-203ENST00000459756 C2orf70A6NJV1 201 aa12.22□□□□□ -0.45
COL7A1-203ENST00000459756 A8MZ25 164 aa12.22□□□□□ -0.45
COL7A1-203ENST00000459756 DISC1C4P0D8 188 aa12.22□□□□□ -0.45
COL7A1-203ENST00000459756 IGKV1-39P01597 117 aa12.22□□□□□ -0.45
COL7A1-203ENST00000459756 IGKV1D-39P04432 117 aa12.22□□□□□ -0.45
COL7A1-203ENST00000459756 IGHV4-30-4P0DP06 118 aa12.22□□□□□ -0.45
COL7A1-203ENST00000459756 FOLR2P14207 255 aa12.22□□□□□ -0.45
COL7A1-203ENST00000459756 PI3P19957 117 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms