RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 ACTL6BO94805 426 aa7.21□□□□□ -1.26
VPS50-207ENST00000458530 MSMBP08118 114 aa7.21□□□□□ -1.26
VPS50-207ENST00000458530 OR8U8P0C7N1 319 aa7.21□□□□□ -1.26
VPS50-207ENST00000458530 BRS3P32247 399 aa7.21□□□□□ -1.26
VPS50-207ENST00000458530 CHRNA7P36544 502 aa7.21□□□□□ -1.26
VPS50-207ENST00000458530 HTR2BP41595 481 aa7.21□□□□□ -1.26
VPS50-207ENST00000458530 RAB11AP62491 216 aa7.21□□□□□ -1.26
VPS50-207ENST00000458530 RPL8P62917 257 aaKnown RBP7.21□□□□□ -1.26
VPS50-207ENST00000458530 PRCDQ00LT1 54 aa7.21□□□□□ -1.26
VPS50-207ENST00000458530 KLRD1Q13241 179 aa7.21□□□□□ -1.26
VPS50-207ENST00000458530 ATP6V1FQ16864 119 aa7.21□□□□□ -1.26
VPS50-207ENST00000458530 KRTAP24-1Q3LI83 254 aa7.21□□□□□ -1.26
VPS50-207ENST00000458530 XP32Q5T750 250 aa7.21□□□□□ -1.26
VPS50-207ENST00000458530 SLC25A24Q6NUK1 477 aa7.21□□□□□ -1.26
VPS50-207ENST00000458530 MMD2Q8IY49 270 aa7.21□□□□□ -1.26
VPS50-207ENST00000458530 VKORC1L1Q8N0U8 176 aa7.21□□□□□ -1.26
VPS50-207ENST00000458530 OR1L8Q8NGR8 309 aa7.21□□□□□ -1.26
VPS50-207ENST00000458530 MALSU1Q96EH3 234 aa7.21□□□□□ -1.26
VPS50-207ENST00000458530 GNPNAT1Q96EK6 184 aaPredicted RBP7.21□□□□□ -1.26
VPS50-207ENST00000458530 ATP5SQ99766 215 aa7.21□□□□□ -1.26
VPS50-207ENST00000458530 SLC25A32Q9H2D1 315 aa7.21□□□□□ -1.26
VPS50-207ENST00000458530 KIAA1456Q9P272 454 aa7.21□□□□□ -1.26
VPS50-207ENST00000458530 CR1P17927 2039 aa7.2□□□□□ -1.26
VPS50-207ENST00000458530 RNASEK-C17orf49H0YIS7 233 aa7.2□□□□□ -1.26
VPS50-207ENST00000458530 H3BP45 60 aa7.2□□□□□ -1.26
VPS50-207ENST00000458530 J3QLI3 93 aa7.2□□□□□ -1.26
VPS50-207ENST00000458530 TIMM23O14925 209 aa7.2□□□□□ -1.26
VPS50-207ENST00000458530 KCNAB3O43448 404 aa7.2□□□□□ -1.26
VPS50-207ENST00000458530 CD5LO43866 347 aa7.2□□□□□ -1.26
VPS50-207ENST00000458530 TSPAN9O75954 239 aa7.2□□□□□ -1.26
VPS50-207ENST00000458530 IFNA10P01566 189 aa7.2□□□□□ -1.26
VPS50-207ENST00000458530 IL6RP08887 468 aaPredicted RBP7.2□□□□□ -1.26
VPS50-207ENST00000458530 PAX9P55771 341 aa7.2□□□□□ -1.26
VPS50-207ENST00000458530 NHLH2Q02577 135 aa7.2□□□□□ -1.26
VPS50-207ENST00000458530 PAX8Q06710 450 aa7.2□□□□□ -1.26
VPS50-207ENST00000458530 LOXL1Q08397 574 aaPredicted RBP7.2□□□□□ -1.26
VPS50-207ENST00000458530 TMEM267Q0VDI3 215 aaPredicted RBP7.2□□□□□ -1.26
VPS50-207ENST00000458530 DIAPH2-AS1Q14236 149 aa7.2□□□□□ -1.26
VPS50-207ENST00000458530 HABP2Q14520 560 aaPredicted RBP7.2□□□□□ -1.26
VPS50-207ENST00000458530 CLLU1Q5K131 121 aa7.2□□□□□ -1.26
VPS50-207ENST00000458530 RPL7L1Q6DKI1 246 aaKnown RBP7.2□□□□□ -1.26
VPS50-207ENST00000458530 HCP5Q6MZN7 132 aa7.2□□□□□ -1.26
VPS50-207ENST00000458530 ALKAL2Q6UX46 152 aa7.2□□□□□ -1.26
VPS50-207ENST00000458530 TMEM14EPQ6UXP3 125 aa7.2□□□□□ -1.26
VPS50-207ENST00000458530 LINC01356Q8N9X3 169 aa7.2□□□□□ -1.26
VPS50-207ENST00000458530 OR10P1Q8NGE3 313 aa7.2□□□□□ -1.26
VPS50-207ENST00000458530 OR5C1Q8NGR4 320 aa7.2□□□□□ -1.26
VPS50-207ENST00000458530 OR2T10Q8NGZ9 312 aa7.2□□□□□ -1.26
VPS50-207ENST00000458530 SCGB1C1Q8TD33 95 aa7.2□□□□□ -1.26
VPS50-207ENST00000458530 C1orf159Q96HA4 380 aa7.2□□□□□ -1.26
VPS50-207ENST00000458530 TBX15Q96SF7 602 aa7.2□□□□□ -1.26
VPS50-207ENST00000458530 PARD6GQ9BYG4 376 aaPredicted RBP7.2□□□□□ -1.26
VPS50-207ENST00000458530 SMIM3Q9BZL3 60 aa7.2□□□□□ -1.26
VPS50-207ENST00000458530 CYTL1Q9NRR1 136 aa7.2□□□□□ -1.26
VPS50-207ENST00000458530 AUP1Q9Y679 476 aa7.2□□□□□ -1.26
VPS50-207ENST00000458530 NPFFO15130 113 aa7.19□□□□□ -1.26
VPS50-207ENST00000458530 SLC25A17O43808 307 aa7.19□□□□□ -1.26
VPS50-207ENST00000458530 CST7O76096 145 aa7.19□□□□□ -1.26
VPS50-207ENST00000458530 VENTXO95231 258 aa7.19□□□□□ -1.26
VPS50-207ENST00000458530 TMEM50AO95807 157 aa7.19□□□□□ -1.26
VPS50-207ENST00000458530 MOSP00540 346 aa7.19□□□□□ -1.26
VPS50-207ENST00000458530 CFDP00746 253 aaPredicted RBP7.19□□□□□ -1.26
VPS50-207ENST00000458530 SEC11BP0C7V7 166 aa7.19□□□□□ -1.26
VPS50-207ENST00000458530 METTL15P1P0C7V9 234 aa7.19□□□□□ -1.26
VPS50-207ENST00000458530 RAB5CP51148 216 aa7.19□□□□□ -1.26
VPS50-207ENST00000458530 DYNLT3P51808 116 aa7.19□□□□□ -1.26
VPS50-207ENST00000458530 SUB1P53999 127 aaKnown RBP eCLIP7.19□□□□□ -1.26
VPS50-207ENST00000458530 ERHP84090 104 aaKnown RBP7.19□□□□□ -1.26
VPS50-207ENST00000458530 SLC38A11Q08AI6 406 aa7.19□□□□□ -1.26
VPS50-207ENST00000458530 CLINT1Q14677 625 aa7.19□□□□□ -1.26
VPS50-207ENST00000458530 PLGLAQ15195 96 aa7.19□□□□□ -1.26
VPS50-207ENST00000458530 HSD17B13Q7Z5P4 300 aaPredicted RBP7.19□□□□□ -1.26
VPS50-207ENST00000458530 PDZD9Q8IXQ8 264 aa7.19□□□□□ -1.26
VPS50-207ENST00000458530 TMEM217Q8N7C4 229 aa7.19□□□□□ -1.26
VPS50-207ENST00000458530 RNF141Q8WVD5 230 aa7.19□□□□□ -1.26
VPS50-207ENST00000458530 GINS3Q9BRX5 216 aa7.19□□□□□ -1.26
VPS50-207ENST00000458530 TMEM147Q9BVK8 224 aa7.19□□□□□ -1.26
VPS50-207ENST00000458530 GGACTQ9BVM4 153 aa7.19□□□□□ -1.26
VPS50-207ENST00000458530 ARV1Q9H2C2 271 aa7.19□□□□□ -1.26
VPS50-207ENST00000458530 MMP26Q9NRE1 261 aa7.19□□□□□ -1.26
VPS50-207ENST00000458530 C1RLQ9NZP8 487 aa7.19□□□□□ -1.26
VPS50-207ENST00000458530 PFDN2Q9UHV9 154 aa7.19□□□□□ -1.26
VPS50-207ENST00000458530 HILPDAQ9Y5L2 63 aa7.19□□□□□ -1.26
VPS50-207ENST00000458530 SVEP1Q4LDE5 3571 aa7.19□□□□□ -1.26
VPS50-207ENST00000458530 TNCP24821 2201 aa7.19□□□□□ -1.26
VPS50-207ENST00000458530 A0A096LNT2 108 aa7.18□□□□□ -1.26
VPS50-207ENST00000458530 IGHV3-72A0A0B4J1Y9 119 aa7.18□□□□□ -1.26
VPS50-207ENST00000458530 SRRM4A7MD48 611 aaKnown RBP7.18□□□□□ -1.26
VPS50-207ENST00000458530 INS-IGF2F8WCM5 200 aa7.18□□□□□ -1.26
VPS50-207ENST00000458530 NBR2O15453 112 aa7.18□□□□□ -1.26
VPS50-207ENST00000458530 SOX15O60248 233 aa7.18□□□□□ -1.26
VPS50-207ENST00000458530 IGLV2-23P01705 113 aa7.18□□□□□ -1.26
VPS50-207ENST00000458530 FAM157CP0CG43 387 aa7.18□□□□□ -1.26
VPS50-207ENST00000458530 FAM106CPP0CH98 169 aa7.18□□□□□ -1.26
VPS50-207ENST00000458530 NPY1RP25929 384 aa7.18□□□□□ -1.26
VPS50-207ENST00000458530 SAA4P35542 130 aa7.18□□□□□ -1.26
VPS50-207ENST00000458530 SNCAP37840 140 aa7.18□□□□□ -1.26
VPS50-207ENST00000458530 VDAC2P45880 294 aaPredicted RBP7.18□□□□□ -1.26
VPS50-207ENST00000458530 DLX1P56177 255 aa7.18□□□□□ -1.26
VPS50-207ENST00000458530 BPIFB3P59826 476 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms