RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 CD55P08174 381 aa9.78□□□□□ -0.84
SYNE2-207ENST00000458046 SSTR5P35346 364 aa9.78□□□□□ -0.84
SYNE2-207ENST00000458046 CDX1P47902 265 aaPredicted RBP9.78□□□□□ -0.84
SYNE2-207ENST00000458046 LRRC75BQ2VPJ9 315 aa9.78□□□□□ -0.84
SYNE2-207ENST00000458046 MDS2Q8NDY4 140 aa9.78□□□□□ -0.84
SYNE2-207ENST00000458046 TMEM9BQ9NQ34 198 aa9.78□□□□□ -0.84
SYNE2-207ENST00000458046 CISD1Q9NZ45 108 aaKnown RBP9.78□□□□□ -0.84
SYNE2-207ENST00000458046 UBE2L5PA0A1B0GUS4 154 aa9.78□□□□□ -0.84
SYNE2-207ENST00000458046 K7EP13 123 aa9.78□□□□□ -0.84
SYNE2-207ENST00000458046 CLDN1O95832 211 aa9.78□□□□□ -0.84
SYNE2-207ENST00000458046 TFF1P04155 84 aa9.78□□□□□ -0.84
SYNE2-207ENST00000458046 ZNF25P17030 456 aaPredicted RBP9.78□□□□□ -0.84
SYNE2-207ENST00000458046 MDKP21741 143 aaPredicted RBP9.78□□□□□ -0.84
SYNE2-207ENST00000458046 MDH2P40926 338 aaKnown RBP9.78□□□□□ -0.84
SYNE2-207ENST00000458046 KIR2DL2P43627 348 aaPredicted RBP9.78□□□□□ -0.84
SYNE2-207ENST00000458046 RPL32P62910 135 aaKnown RBP9.78□□□□□ -0.84
SYNE2-207ENST00000458046 HBG1P69891 147 aa9.78□□□□□ -0.84
SYNE2-207ENST00000458046 HBG2P69892 147 aa9.78□□□□□ -0.84
SYNE2-207ENST00000458046 FFAR4Q5NUL3 377 aa9.78□□□□□ -0.84
SYNE2-207ENST00000458046 ATP1A1-AS1Q5TC04 95 aa9.78□□□□□ -0.84
SYNE2-207ENST00000458046 V9GYY9 64 aa9.78□□□□□ -0.84
SYNE2-207ENST00000458046 ZFYVE26Q68DK2 2539 aa9.77□□□□□ -0.85
SYNE2-207ENST00000458046 CXorf65A6NEN9 183 aa9.77□□□□□ -0.85
SYNE2-207ENST00000458046 F5H768 121 aa9.77□□□□□ -0.85
SYNE2-207ENST00000458046 ZNF816Q0VGE8 651 aaPredicted RBP9.77□□□□□ -0.85
SYNE2-207ENST00000458046 TBC1D28Q2M2D7 210 aa9.77□□□□□ -0.85
SYNE2-207ENST00000458046 PYY3Q5JQD4 70 aa9.77□□□□□ -0.85
SYNE2-207ENST00000458046 OR1L1Q8NH94 360 aa9.77□□□□□ -0.85
SYNE2-207ENST00000458046 MBD3L1Q8WWY6 194 aa9.77□□□□□ -0.85
SYNE2-207ENST00000458046 WDYHV1Q96HA8 205 aa9.77□□□□□ -0.85
SYNE2-207ENST00000458046 WDR61Q9GZS3 305 aaKnown RBP9.77□□□□□ -0.85
SYNE2-207ENST00000458046 CACNA1DQ01668 2161 aa9.77□□□□□ -0.85
SYNE2-207ENST00000458046 SH2D1BO14796 132 aa9.77□□□□□ -0.85
SYNE2-207ENST00000458046 CSN3P07498 182 aa9.77□□□□□ -0.85
SYNE2-207ENST00000458046 S100A2P29034 98 aa9.77□□□□□ -0.85
SYNE2-207ENST00000458046 G6PCP35575 357 aa9.77□□□□□ -0.85
SYNE2-207ENST00000458046 PPP1CBP62140 327 aa9.77□□□□□ -0.85
SYNE2-207ENST00000458046 FAM71F2Q6NXP2 309 aa9.77□□□□□ -0.85
SYNE2-207ENST00000458046 OR5AN1Q8NGI8 311 aa9.77□□□□□ -0.85
SYNE2-207ENST00000458046 LOXL4Q96JB6 756 aa9.77□□□□□ -0.85
SYNE2-207ENST00000458046 RBKSQ9H477 322 aa9.77□□□□□ -0.85
SYNE2-207ENST00000458046 LSM4Q9Y4Z0 139 aaKnown RBP9.77□□□□□ -0.85
SYNE2-207ENST00000458046 SPENQ96T58 3664 aaKnown RBP9.76□□□□□ -0.85
SYNE2-207ENST00000458046 LRP5LA4QPB2 252 aa9.76□□□□□ -0.85
SYNE2-207ENST00000458046 MAP1LC3B2A6NCE7 125 aa9.76□□□□□ -0.85
SYNE2-207ENST00000458046 WNT9BO14905 357 aa9.76□□□□□ -0.85
SYNE2-207ENST00000458046 PSPNO60542 156 aa9.76□□□□□ -0.85
SYNE2-207ENST00000458046 RPL30P62888 115 aaKnown RBP9.76□□□□□ -0.85
SYNE2-207ENST00000458046 SLC38A11Q08AI6 406 aa9.76□□□□□ -0.85
SYNE2-207ENST00000458046 ZNF826PQ6ZT77 177 aa9.76□□□□□ -0.85
SYNE2-207ENST00000458046 PIP4P2Q8N4L2 257 aa9.76□□□□□ -0.85
SYNE2-207ENST00000458046 OR10D4PQ8NGN7 298 aa9.76□□□□□ -0.85
SYNE2-207ENST00000458046 SLC25A40Q8TBP6 338 aa9.76□□□□□ -0.85
SYNE2-207ENST00000458046 FRZBQ92765 325 aa9.76□□□□□ -0.85
SYNE2-207ENST00000458046 TAF15Q92804 592 aaKnown RBP eCLIP9.76□□□□□ -0.85
SYNE2-207ENST00000458046 MAP1LC3BQ9GZQ8 125 aa9.76□□□□□ -0.85
SYNE2-207ENST00000458046 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.76□□□□□ -0.85
SYNE2-207ENST00000458046 SLC39A9Q9NUM3 307 aa9.76□□□□□ -0.85
SYNE2-207ENST00000458046 EP300Q09472 2414 aaPredicted RBP9.76□□□□□ -0.85
SYNE2-207ENST00000458046 LYZL6O75951 148 aa9.76□□□□□ -0.85
SYNE2-207ENST00000458046 IGKV1D-33P01593 117 aa9.76□□□□□ -0.85
SYNE2-207ENST00000458046 IGKV1-33P01594 117 aa9.76□□□□□ -0.85
SYNE2-207ENST00000458046 SOD3P08294 240 aa9.76□□□□□ -0.85
SYNE2-207ENST00000458046 TRGC1P0CF51 173 aa9.76□□□□□ -0.85
SYNE2-207ENST00000458046 LINC00205P59089 165 aa9.76□□□□□ -0.85
SYNE2-207ENST00000458046 RPP25LQ8N5L8 163 aaKnown RBP9.76□□□□□ -0.85
SYNE2-207ENST00000458046 ZNF738Q8NE65 137 aa9.76□□□□□ -0.85
SYNE2-207ENST00000458046 OR10G4Q8NGN3 311 aa9.76□□□□□ -0.85
SYNE2-207ENST00000458046 PSMG3Q9BT73 122 aaPredicted RBP9.76□□□□□ -0.85
SYNE2-207ENST00000458046 OR2D2Q9H210 308 aa9.76□□□□□ -0.85
SYNE2-207ENST00000458046 SDF2L1Q9HCN8 221 aa9.76□□□□□ -0.85
SYNE2-207ENST00000458046 SPRR3Q9UBC9 169 aa9.76□□□□□ -0.85
SYNE2-207ENST00000458046 POLDIP2Q9Y2S7 368 aa9.76□□□□□ -0.85
SYNE2-207ENST00000458046 GTF3C1Q12789 2109 aa9.75□□□□□ -0.85
SYNE2-207ENST00000458046 PIGBOS1A0A0B4J2F0 54 aa9.75□□□□□ -0.85
SYNE2-207ENST00000458046 B4DEV8 164 aa9.75□□□□□ -0.85
SYNE2-207ENST00000458046 ZNF737O75373 536 aa9.75□□□□□ -0.85
SYNE2-207ENST00000458046 PGA5P0DJD9 388 aa9.75□□□□□ -0.85
SYNE2-207ENST00000458046 SERF2P84101 59 aa9.75□□□□□ -0.85
SYNE2-207ENST00000458046 SPINK9Q5DT21 86 aa9.75□□□□□ -0.85
SYNE2-207ENST00000458046 MOB1BQ7L9L4 216 aa9.75□□□□□ -0.85
SYNE2-207ENST00000458046 TMEM208Q9BTX3 173 aa9.75□□□□□ -0.85
SYNE2-207ENST00000458046 MBNL3Q9NUK0 354 aaKnown RBP9.75□□□□□ -0.85
SYNE2-207ENST00000458046 VAX2Q9UIW0 290 aa9.75□□□□□ -0.85
SYNE2-207ENST00000458046 KLF13Q9Y2Y9 288 aaPredicted RBP9.75□□□□□ -0.85
SYNE2-207ENST00000458046 CHD3Q12873 2000 aaKnown RBP9.75□□□□□ -0.85
SYNE2-207ENST00000458046 HAND1O96004 215 aa9.75□□□□□ -0.85
SYNE2-207ENST00000458046 TNP2Q05952 138 aa9.75□□□□□ -0.85
SYNE2-207ENST00000458046 PSG7Q13046 419 aa9.75□□□□□ -0.85
SYNE2-207ENST00000458046 MRGPRGQ86SM5 289 aa9.75□□□□□ -0.85
SYNE2-207ENST00000458046 TPRX1Q8N7U7 411 aa9.75□□□□□ -0.85
SYNE2-207ENST00000458046 CDH20Q9HBT6 801 aa9.75□□□□□ -0.85
SYNE2-207ENST00000458046 JKAMPQ9P055 326 aa9.75□□□□□ -0.85
SYNE2-207ENST00000458046 WIPI2Q9Y4P8 454 aa9.75□□□□□ -0.85
SYNE2-207ENST00000458046 TRGV5A0A0B4J1U4 118 aa9.74□□□□□ -0.85
SYNE2-207ENST00000458046 C21orf140B9A014 251 aa9.74□□□□□ -0.85
SYNE2-207ENST00000458046 J3QLI3 93 aa9.74□□□□□ -0.85
SYNE2-207ENST00000458046 WNT2P09544 360 aa9.74□□□□□ -0.85
SYNE2-207ENST00000458046 IL2RGP31785 369 aa9.74□□□□□ -0.85
SYNE2-207ENST00000458046 UBE2NP61088 152 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms