RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 HLA-GP17693 338 aa11.01□□□□□ -0.65
SF3B4-202ENST00000457312 CELP19835 753 aa11.01□□□□□ -0.65
SF3B4-202ENST00000457312 HTR2CP28335 458 aa11.01□□□□□ -0.65
SF3B4-202ENST00000457312 GTF2A1P52655 376 aaPredicted RBP11.01□□□□□ -0.65
SF3B4-202ENST00000457312 LHFPL3Q86UP9 236 aa11.01□□□□□ -0.65
SF3B4-202ENST00000457312 GDPD1Q8N9F7 314 aa11.01□□□□□ -0.65
SF3B4-202ENST00000457312 TNFRSF18Q9Y5U5 241 aa11.01□□□□□ -0.65
SF3B4-202ENST00000457312 IGLV5-52A0A0A0MRZ9 124 aa11□□□□□ -0.65
SF3B4-202ENST00000457312 SRMP19623 302 aa11□□□□□ -0.65
SF3B4-202ENST00000457312 SERPINB10P48595 397 aa11□□□□□ -0.65
SF3B4-202ENST00000457312 MS4A2Q01362 244 aa11□□□□□ -0.65
SF3B4-202ENST00000457312 MRPL28Q13084 256 aaKnown RBP11□□□□□ -0.65
SF3B4-202ENST00000457312 LELP1Q5T871 98 aa11□□□□□ -0.65
SF3B4-202ENST00000457312 OGFRL1Q5TC84 451 aaPredicted RBP11□□□□□ -0.65
SF3B4-202ENST00000457312 ARHGAP24Q8N264 748 aa11□□□□□ -0.65
SF3B4-202ENST00000457312 OR8J1Q8NGP2 316 aa11□□□□□ -0.65
SF3B4-202ENST00000457312 H3BMM0 161 aa10.99□□□□□ -0.65
SF3B4-202ENST00000457312 PSMG4Q5JS54 123 aa10.99□□□□□ -0.65
SF3B4-202ENST00000457312 KCTD9Q7L273 389 aa10.99□□□□□ -0.65
SF3B4-202ENST00000457312 MRPL48Q96GC5 212 aaKnown RBP10.99□□□□□ -0.65
SF3B4-202ENST00000457312 GINS3Q9BRX5 216 aa10.99□□□□□ -0.65
SF3B4-202ENST00000457312 FAM212BQ9NTI7 297 aaPredicted RBP10.99□□□□□ -0.65
SF3B4-202ENST00000457312 BET1O15155 118 aa10.98□□□□□ -0.65
SF3B4-202ENST00000457312 HBE1P02100 147 aa10.98□□□□□ -0.65
SF3B4-202ENST00000457312 ESRGQ1W209 222 aa10.98□□□□□ -0.65
SF3B4-202ENST00000457312 XAF1Q6GPH4 301 aa10.98□□□□□ -0.65
SF3B4-202ENST00000457312 OR10K2Q6IF99 312 aa10.98□□□□□ -0.65
SF3B4-202ENST00000457312 SLC25A24Q6NUK1 477 aa10.98□□□□□ -0.65
SF3B4-202ENST00000457312 ZNF773Q6PK81 442 aa10.98□□□□□ -0.65
SF3B4-202ENST00000457312 ZNF114Q8NC26 417 aa10.98□□□□□ -0.65
SF3B4-202ENST00000457312 GGHQ92820 318 aa10.98□□□□□ -0.65
SF3B4-202ENST00000457312 CABLES2Q9BTV7 478 aa10.98□□□□□ -0.65
SF3B4-202ENST00000457312 C12orf4Q9NQ89 552 aa10.98□□□□□ -0.65
SF3B4-202ENST00000457312 EXOGQ9Y2C4 368 aaKnown RBP10.98□□□□□ -0.65
SF3B4-202ENST00000457312 MRPS7Q9Y2R9 242 aaKnown RBP10.98□□□□□ -0.65
SF3B4-202ENST00000457312 TRDCB7Z8K6 153 aa10.97□□□□□ -0.65
SF3B4-202ENST00000457312 CYB5BO43169 146 aa10.97□□□□□ -0.65
SF3B4-202ENST00000457312 GBX2P52951 348 aaPredicted RBP10.97□□□□□ -0.65
SF3B4-202ENST00000457312 FXYD7P58549 80 aa10.97□□□□□ -0.65
SF3B4-202ENST00000457312 RPL30P62888 115 aaKnown RBP10.97□□□□□ -0.65
SF3B4-202ENST00000457312 IGSF11Q5DX21 431 aa10.97□□□□□ -0.65
SF3B4-202ENST00000457312 OR10W1Q8NGF6 305 aa10.97□□□□□ -0.65
SF3B4-202ENST00000457312 OR4A4PQ8NGN8 299 aa10.97□□□□□ -0.65
SF3B4-202ENST00000457312 CANT1Q8WVQ1 401 aa10.97□□□□□ -0.65
SF3B4-202ENST00000457312 NXF2Q9GZY0 626 aaKnown RBP10.97□□□□□ -0.65
SF3B4-202ENST00000457312 PLEKHJ1Q9NW61 149 aa10.97□□□□□ -0.65
SF3B4-202ENST00000457312 CKLFQ9UBR5 152 aa10.97□□□□□ -0.65
SF3B4-202ENST00000457312 RBM7Q9Y580 266 aaKnown RBP10.97□□□□□ -0.65
SF3B4-202ENST00000457312 A0A0A6YYD4 124 aa10.96□□□□□ -0.65
SF3B4-202ENST00000457312 DCTN3O75935 186 aa10.96□□□□□ -0.65
SF3B4-202ENST00000457312 TOMM20LQ6UXN7 152 aa10.96□□□□□ -0.65
SF3B4-202ENST00000457312 Q6ZSA8 131 aa10.96□□□□□ -0.65
SF3B4-202ENST00000457312 OR4S2Q8NH73 311 aa10.96□□□□□ -0.65
SF3B4-202ENST00000457312 NRBF2Q96F24 287 aa10.96□□□□□ -0.65
SF3B4-202ENST00000457312 TMEM59Q9BXS4 323 aa10.96□□□□□ -0.65
SF3B4-202ENST00000457312 PRELID3BQ9Y3B1 194 aa10.96□□□□□ -0.65
SF3B4-202ENST00000457312 TRBV6-7A0A0A0MS04 114 aa10.95□□□□□ -0.66
SF3B4-202ENST00000457312 TRBV5-5A0A0J9YX44 114 aa10.95□□□□□ -0.66
SF3B4-202ENST00000457312 HELTA6NFD8 242 aa10.95□□□□□ -0.66
SF3B4-202ENST00000457312 C1QBP02746 253 aa10.95□□□□□ -0.66
SF3B4-202ENST00000457312 DEFB130BP0DP73 79 aa10.95□□□□□ -0.66
SF3B4-202ENST00000457312 DEFB130AP0DP74 79 aa10.95□□□□□ -0.66
SF3B4-202ENST00000457312 WT1-ASQ06250 92 aa10.95□□□□□ -0.66
SF3B4-202ENST00000457312 RRN3P1Q2M238 152 aa10.95□□□□□ -0.66
SF3B4-202ENST00000457312 CDH26Q8IXH8 852 aa10.95□□□□□ -0.66
SF3B4-202ENST00000457312 OR10J5Q8NHC4 309 aa10.95□□□□□ -0.66
SF3B4-202ENST00000457312 LGALS12Q96DT0 336 aa10.95□□□□□ -0.66
SF3B4-202ENST00000457312 LYRM9A8MSI8 78 aa10.94□□□□□ -0.66
SF3B4-202ENST00000457312 HMGB1P1B2RPK0 211 aaPredicted RBP10.94□□□□□ -0.66
SF3B4-202ENST00000457312 FABP7O15540 132 aa10.94□□□□□ -0.66
SF3B4-202ENST00000457312 ATP5G1P05496 136 aa10.94□□□□□ -0.66
SF3B4-202ENST00000457312 SERPINE2P07093 398 aa10.94□□□□□ -0.66
SF3B4-202ENST00000457312 HLA-DRB4P13762 266 aa10.94□□□□□ -0.66
SF3B4-202ENST00000457312 ATP5G3P48201 142 aa10.94□□□□□ -0.66
SF3B4-202ENST00000457312 TIMM50Q3ZCQ8 353 aa10.94□□□□□ -0.66
SF3B4-202ENST00000457312 YIF1BQ5BJH7 314 aa10.94□□□□□ -0.66
SF3B4-202ENST00000457312 C1orf158Q8N1D5 194 aa10.94□□□□□ -0.66
SF3B4-202ENST00000457312 KCNK15Q9H427 330 aa10.94□□□□□ -0.66
SF3B4-202ENST00000457312 TMEM231Q9H6L2 316 aa10.94□□□□□ -0.66
SF3B4-202ENST00000457312 ZFAND3Q9H8U3 227 aa10.94□□□□□ -0.66
SF3B4-202ENST00000457312 ERVK13-1Q9NX77 482 aa10.94□□□□□ -0.66
SF3B4-202ENST00000457312 BET1LQ9NYM9 111 aa10.94□□□□□ -0.66
SF3B4-202ENST00000457312 GHRLQ9UBU3 117 aa10.94□□□□□ -0.66
SF3B4-202ENST00000457312 F11RQ9Y624 299 aaKnown RBP10.94□□□□□ -0.66
SF3B4-202ENST00000457312 HLA-DRB4X5D2U9 266 aa10.94□□□□□ -0.66
SF3B4-202ENST00000457312 OR13C7P0DN81 318 aa10.93□□□□□ -0.66
SF3B4-202ENST00000457312 POLR2IP36954 125 aaKnown RBP10.93□□□□□ -0.66
SF3B4-202ENST00000457312 BRWD1-AS2P59051 145 aa10.93□□□□□ -0.66
SF3B4-202ENST00000457312 UNC119Q13432 240 aa10.93□□□□□ -0.66
SF3B4-202ENST00000457312 KDM4DQ6B0I6 523 aa10.93□□□□□ -0.66
SF3B4-202ENST00000457312 NFE4Q86UQ8 179 aa10.93□□□□□ -0.66
SF3B4-202ENST00000457312 ZNF709Q8N972 641 aa10.93□□□□□ -0.66
SF3B4-202ENST00000457312 NTN5Q8WTR8 489 aaPredicted RBP10.93□□□□□ -0.66
SF3B4-202ENST00000457312 MYCBPQ99417 103 aaPredicted RBP10.93□□□□□ -0.66
SF3B4-202ENST00000457312 QTRT1Q9BXR0 403 aaKnown RBP10.93□□□□□ -0.66
SF3B4-202ENST00000457312 GOLT1BQ9Y3E0 138 aa10.93□□□□□ -0.66
SF3B4-202ENST00000457312 TAS2R43P59537 309 aa10.92□□□□□ -0.66
SF3B4-202ENST00000457312 RPL22L1Q6P5R6 122 aaKnown RBP10.92□□□□□ -0.66
SF3B4-202ENST00000457312 UQCC2Q9BRT2 126 aa10.92□□□□□ -0.66
SF3B4-202ENST00000457312 TRAV3A0A0B4J244 114 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms