RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 ZNF767PQ75MW2 155 aa4.39□□□□□ -1.71
HLA-DPA3-207ENST00000454398 WFDC3Q8IUB2 231 aa4.39□□□□□ -1.71
HLA-DPA3-207ENST00000454398 SLC38A6Q8IZM9 456 aa4.39□□□□□ -1.71
HLA-DPA3-207ENST00000454398 SPAG16Q8N0X2 631 aa4.39□□□□□ -1.71
HLA-DPA3-207ENST00000454398 GDPD1Q8N9F7 314 aa4.39□□□□□ -1.71
HLA-DPA3-207ENST00000454398 OR11H2Q8NH07 326 aa4.39□□□□□ -1.71
HLA-DPA3-207ENST00000454398 C11orf45Q8TAV5 145 aa4.39□□□□□ -1.71
HLA-DPA3-207ENST00000454398 GIMAP1Q8WWP7 306 aa4.39□□□□□ -1.71
HLA-DPA3-207ENST00000454398 MGLLQ99685 303 aa4.39□□□□□ -1.71
HLA-DPA3-207ENST00000454398 ZNF436Q9C0F3 470 aaPredicted RBP4.39□□□□□ -1.71
HLA-DPA3-207ENST00000454398 C5orf66Q9H5L9 145 aa4.39□□□□□ -1.71
HLA-DPA3-207ENST00000454398 MAP6D1Q9H9H5 199 aa4.39□□□□□ -1.71
HLA-DPA3-207ENST00000454398 PTTG2Q9NZH5 202 aa4.39□□□□□ -1.71
HLA-DPA3-207ENST00000454398 UFC1Q9Y3C8 167 aa4.39□□□□□ -1.71
HLA-DPA3-207ENST00000454398 TRBV7-1A0A0A6YYK4 115 aa4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 KIR2DL5BA0A0G2JN68 375 aa4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 KIR2DL5BA0A0G2JPC4 375 aa4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 SMIM31A0A1B0GVY4 71 aa4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 OR4C46A6NHA9 309 aa4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 DBX1A6NMT0 343 aa4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 K7EIM0 57 aa4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 CASQ2O14958 399 aaPredicted RBP4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 NUPL2O15504 423 aaKnown RBP4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 ATP6V1G1O75348 118 aa4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 DIRAS3O95661 229 aa4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 DHFRP00374 187 aa4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 HNRNPCP07910 306 aaKnown RBP eCLIP4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 RAB3BP20337 219 aa4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 RAB6AP20340 208 aa4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 C4BPBP20851 252 aa4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 MYL9P24844 172 aa4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 FCGR2CP31995 323 aa4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 ARPC4P59998 168 aa4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 Q56UQ5 140 aa4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 SPINK9Q5DT21 86 aa4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 AADACL3Q5VUY0 350 aa4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 HACD4Q5VWC8 232 aa4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 ZNF818PQ6ZRF7 136 aa4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 Q6ZS49 121 aa4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 Q6ZTC4 211 aa4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 KIR2DL5AQ8N109 375 aa4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 MFSD4AQ8N468 514 aa4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 TMEM217Q8N7C4 229 aa4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 KIR2DL5BQ8NHK3 375 aa4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 VSTM2AQ8TAG5 236 aa4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 MARC2Q969Z3 335 aa4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 SLC25A38Q96DW6 304 aa4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 CXorf58Q96LI9 332 aa4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 HSD17B10Q99714 261 aaKnown RBP4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 RARRES2Q99969 163 aa4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 QTRT1Q9BXR0 403 aaKnown RBP4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 MRPS26Q9BYN8 205 aaKnown RBP4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 COMMD5Q9GZQ3 224 aa4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 SLC5A7Q9GZV3 580 aa4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 Q9H521 79 aa4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 NDUFB11Q9NX14 153 aa4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 NDUFA13Q9P0J0 144 aa4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 MRPL27Q9P0M9 148 aaKnown RBP4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 DAPK2Q9UIK4 370 aa4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 ANXA10Q9UJ72 324 aa4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 CELA1Q9UNI1 258 aa4.38□□□□□ -1.71
HLA-DPA3-207ENST00000454398 TRAV25A0A0B4J276 109 aa4.37□□□□□ -1.71
HLA-DPA3-207ENST00000454398 IGHV4-28A0A0C4DH34 117 aa4.37□□□□□ -1.71
HLA-DPA3-207ENST00000454398 A0A1B0GVY2 172 aa4.37□□□□□ -1.71
HLA-DPA3-207ENST00000454398 METTL21EPA6NDL7 271 aa4.37□□□□□ -1.71
HLA-DPA3-207ENST00000454398 M0R2N4 97 aa4.37□□□□□ -1.71
HLA-DPA3-207ENST00000454398 UPK2O00526 184 aa4.37□□□□□ -1.71
HLA-DPA3-207ENST00000454398 YIF1AO95070 293 aa4.37□□□□□ -1.71
HLA-DPA3-207ENST00000454398 HRASP01112 189 aa4.37□□□□□ -1.71
HLA-DPA3-207ENST00000454398 PPYP01298 95 aa4.37□□□□□ -1.71
HLA-DPA3-207ENST00000454398 APOHP02749 345 aaPredicted RBP4.37□□□□□ -1.71
HLA-DPA3-207ENST00000454398 CLEC2LP0C7M8 214 aa4.37□□□□□ -1.71
HLA-DPA3-207ENST00000454398 SMIM18P0DKX4 95 aa4.37□□□□□ -1.71
HLA-DPA3-207ENST00000454398 HIST1H1BP16401 226 aaKnown RBP4.37□□□□□ -1.71
HLA-DPA3-207ENST00000454398 GALP22466 123 aa4.37□□□□□ -1.71
HLA-DPA3-207ENST00000454398 PSMA1P25786 263 aaKnown RBP4.37□□□□□ -1.71
HLA-DPA3-207ENST00000454398 MAS1LP35410 378 aa4.37□□□□□ -1.71
HLA-DPA3-207ENST00000454398 TBCEQ15813 527 aaPredicted RBP4.37□□□□□ -1.71
HLA-DPA3-207ENST00000454398 SLC25A24Q6NUK1 477 aa4.37□□□□□ -1.71
HLA-DPA3-207ENST00000454398 ZNF367Q7RTV3 350 aa4.37□□□□□ -1.71
HLA-DPA3-207ENST00000454398 ZNF575Q86XF7 245 aa4.37□□□□□ -1.71
HLA-DPA3-207ENST00000454398 LILRB2Q8N423 598 aa4.37□□□□□ -1.71
HLA-DPA3-207ENST00000454398 Q8NAQ8 132 aa4.37□□□□□ -1.71
HLA-DPA3-207ENST00000454398 DMBX1Q8NFW5 382 aa4.37□□□□□ -1.71
HLA-DPA3-207ENST00000454398 OR5H6Q8NGV6 325 aa4.37□□□□□ -1.71
HLA-DPA3-207ENST00000454398 C2CD4CQ8TF44 421 aa4.37□□□□□ -1.71
HLA-DPA3-207ENST00000454398 SCARB1Q8WTV0 552 aa4.37□□□□□ -1.71
HLA-DPA3-207ENST00000454398 ST8SIA2Q92186 375 aa4.37□□□□□ -1.71
HLA-DPA3-207ENST00000454398 MISP3Q96FF7 219 aa4.37□□□□□ -1.71
HLA-DPA3-207ENST00000454398 CNBD2Q96M20 576 aa4.37□□□□□ -1.71
HLA-DPA3-207ENST00000454398 RHPN1-AS1Q9BWJ2 59 aa4.37□□□□□ -1.71
HLA-DPA3-207ENST00000454398 FXYD6Q9H0Q3 95 aa4.37□□□□□ -1.71
HLA-DPA3-207ENST00000454398 C11orf68Q9H3H3 251 aaKnown RBP4.37□□□□□ -1.71
HLA-DPA3-207ENST00000454398 DUSP21Q9H596 190 aa4.37□□□□□ -1.71
HLA-DPA3-207ENST00000454398 RNF167Q9H6Y7 350 aa4.37□□□□□ -1.71
HLA-DPA3-207ENST00000454398 ACOT13Q9NPJ3 140 aa4.37□□□□□ -1.71
HLA-DPA3-207ENST00000454398 C8orf4Q9NR00 106 aa4.37□□□□□ -1.71
HLA-DPA3-207ENST00000454398 CLEC5AQ9NY25 188 aa4.37□□□□□ -1.71
HLA-DPA3-207ENST00000454398 SCN3BQ9NY72 215 aa4.37□□□□□ -1.71
HLA-DPA3-207ENST00000454398 BET1LQ9NYM9 111 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms