RNA–Protein interactions for RNA: ENST00000453163.6

PDCD2-204, Transcript of programmed cell death 2, humanhuman

TSL 1 (best) BASIC

Gene PDCD2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-204ENST00000453163 OPN1MW3P0DN78 364 aa16.54■□□□□ 0.24
PDCD2-204ENST00000453163 C4orf17Q53FE4 359 aa16.54■□□□□ 0.24
PDCD2-204ENST00000453163 GCSAMLQ5JQS6 135 aa16.54■□□□□ 0.24
PDCD2-204ENST00000453163 TMEM200BQ69YZ2 307 aa16.54■□□□□ 0.24
PDCD2-204ENST00000453163 UNQ6494/PRO21346Q6UXR6 183 aa16.54■□□□□ 0.24
PDCD2-204ENST00000453163 PITPNC1Q9UKF7 332 aa16.54■□□□□ 0.24
PDCD2-204ENST00000453163 TSTD3H0UI37 97 aa16.54■□□□□ 0.24
PDCD2-204ENST00000453163 MEF2CQ06413 473 aaPredicted RBP16.54■□□□□ 0.24
PDCD2-204ENST00000453163 TREML4Q6UXN2 200 aa16.54■□□□□ 0.24
PDCD2-204ENST00000453163 GATAD1Q8WUU5 269 aa16.54■□□□□ 0.24
PDCD2-204ENST00000453163 SSX3Q99909 188 aa16.54■□□□□ 0.24
PDCD2-204ENST00000453163 SLC35D1Q9NTN3 355 aa16.54■□□□□ 0.24
PDCD2-204ENST00000453163 SPTBN4Q9H254 2564 aa16.54■□□□□ 0.24
PDCD2-204ENST00000453163 CTDSP1Q9GZU7 261 aa16.53■□□□□ 0.24
PDCD2-204ENST00000453163 MS4A5Q9H3V2 200 aa16.53■□□□□ 0.24
PDCD2-204ENST00000453163 CTSZQ9UBR2 303 aa16.53■□□□□ 0.24
PDCD2-204ENST00000453163 NBASA2RRP1 2371 aa16.53■□□□□ 0.24
PDCD2-204ENST00000453163 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.53■□□□□ 0.24
PDCD2-204ENST00000453163 HRASP01112 189 aa16.53■□□□□ 0.24
PDCD2-204ENST00000453163 HSPE1P61604 102 aaKnown RBP16.53■□□□□ 0.24
PDCD2-204ENST00000453163 MEF2BQ02080 365 aaPredicted RBP16.53■□□□□ 0.24
PDCD2-204ENST00000453163 PMS2P11Q13670 270 aa16.53■□□□□ 0.24
PDCD2-204ENST00000453163 POU2AF1Q16633 256 aa16.53■□□□□ 0.24
PDCD2-204ENST00000453163 PRO1933Q9H354 126 aa16.53■□□□□ 0.24
PDCD2-204ENST00000453163 ATRXP46100 2492 aa16.53■□□□□ 0.24
PDCD2-204ENST00000453163 A0A087X0M5 115 aa16.53■□□□□ 0.24
PDCD2-204ENST00000453163 A0A1B0GX30 115 aa16.53■□□□□ 0.24
PDCD2-204ENST00000453163 SRRM4A7MD48 611 aaKnown RBP16.53■□□□□ 0.24
PDCD2-204ENST00000453163 RNF224P0DH78 156 aa16.53■□□□□ 0.24
PDCD2-204ENST00000453163 HINT2Q9BX68 163 aa16.53■□□□□ 0.24
PDCD2-204ENST00000453163 TNFRSF13BO14836 293 aaPredicted RBP16.52■□□□□ 0.24
PDCD2-204ENST00000453163 PLAUP00749 431 aa16.52■□□□□ 0.24
PDCD2-204ENST00000453163 RTL8BQ17RB0 113 aa16.52■□□□□ 0.24
PDCD2-204ENST00000453163 FAM90A27PA6NNH2 459 aa16.52■□□□□ 0.23
PDCD2-204ENST00000453163 NDUFB3O43676 98 aa16.52■□□□□ 0.23
PDCD2-204ENST00000453163 CDC34P49427 236 aaPredicted RBP16.52■□□□□ 0.23
PDCD2-204ENST00000453163 NHLH1Q02575 133 aa16.52■□□□□ 0.23
PDCD2-204ENST00000453163 ACOT6Q3I5F7 207 aaPredicted RBP16.52■□□□□ 0.23
PDCD2-204ENST00000453163 ZNF833PQ6ZTB9 187 aa16.52■□□□□ 0.23
PDCD2-204ENST00000453163 SLC24A4Q8NFF2 622 aa16.52■□□□□ 0.23
PDCD2-204ENST00000453163 LINC01560Q8TB33 94 aa16.52■□□□□ 0.23
PDCD2-204ENST00000453163 MGST2Q99735 147 aa16.52■□□□□ 0.23
PDCD2-204ENST00000453163 MRPL20Q9BYC9 149 aaKnown RBP16.52■□□□□ 0.23
PDCD2-204ENST00000453163 OR51B2Q9Y5P1 312 aa16.52■□□□□ 0.23
PDCD2-204ENST00000453163 ANKHD1Q8IWZ3 2542 aaKnown RBP16.51■□□□□ 0.23
PDCD2-204ENST00000453163 GRNP28799 593 aaKnown RBP16.51■□□□□ 0.23
PDCD2-204ENST00000453163 TMEM183AQ8IXX5 376 aa16.51■□□□□ 0.23
PDCD2-204ENST00000453163 OR10A7Q8NGE5 316 aa16.51■□□□□ 0.23
PDCD2-204ENST00000453163 OR4X1Q8NH49 305 aa16.51■□□□□ 0.23
PDCD2-204ENST00000453163 LRBAP50851 2863 aa16.51■□□□□ 0.23
PDCD2-204ENST00000453163 DVL1O14640 695 aa16.51■□□□□ 0.23
PDCD2-204ENST00000453163 NPY1RP25929 384 aa16.51■□□□□ 0.23
PDCD2-204ENST00000453163 LRRC10Q5BKY1 277 aa16.51■□□□□ 0.23
PDCD2-204ENST00000453163 RNASEH2CQ8TDP1 164 aaKnown RBP16.51■□□□□ 0.23
PDCD2-204ENST00000453163 CD3EP07766 207 aa16.5■□□□□ 0.23
PDCD2-204ENST00000453163 REG1BP48304 166 aa16.5■□□□□ 0.23
PDCD2-204ENST00000453163 PSMB3P49720 205 aa16.5■□□□□ 0.23
PDCD2-204ENST00000453163 JOSD1Q15040 202 aaPredicted RBP16.5■□□□□ 0.23
PDCD2-204ENST00000453163 WDR25Q64LD2 544 aaPredicted RBP16.5■□□□□ 0.23
PDCD2-204ENST00000453163 SRD5A3Q9H8P0 318 aa16.5■□□□□ 0.23
PDCD2-204ENST00000453163 TPRP12270 2363 aaKnown RBP16.5■□□□□ 0.23
PDCD2-204ENST00000453163 MPDU1O75352 247 aa16.5■□□□□ 0.23
PDCD2-204ENST00000453163 CA2P00918 260 aa16.5■□□□□ 0.23
PDCD2-204ENST00000453163 IL6RP08887 468 aaPredicted RBP16.5■□□□□ 0.23
PDCD2-204ENST00000453163 APOBEC3AP31941 199 aaPredicted RBP16.5■□□□□ 0.23
PDCD2-204ENST00000453163 ARSJQ5FYB0 599 aaPredicted RBP16.5■□□□□ 0.23
PDCD2-204ENST00000453163 PYGO2Q9BRQ0 406 aa16.5■□□□□ 0.23
PDCD2-204ENST00000453163 GGTLC1Q9BX51 225 aa16.5■□□□□ 0.23
PDCD2-204ENST00000453163 PATZ1Q9HBE1 687 aaKnown RBP16.5■□□□□ 0.23
PDCD2-204ENST00000453163 ENY2Q9NPA8 101 aa16.5■□□□□ 0.23
PDCD2-204ENST00000453163 C1orf159Q96HA4 380 aa16.49■□□□□ 0.23
PDCD2-204ENST00000453163 UPK2O00526 184 aa16.49■□□□□ 0.23
PDCD2-204ENST00000453163 LOXP28300 417 aaPredicted RBP16.49■□□□□ 0.23
PDCD2-204ENST00000453163 CA7P43166 264 aa16.49■□□□□ 0.23
PDCD2-204ENST00000453163 TAS2R60P59551 318 aa16.49■□□□□ 0.23
PDCD2-204ENST00000453163 MIC13Q5XKP0 118 aa16.49■□□□□ 0.23
PDCD2-204ENST00000453163 PRNDQ9UKY0 176 aa16.49■□□□□ 0.23
PDCD2-204ENST00000453163 PFN1P07737 140 aaKnown RBP16.48■□□□□ 0.23
PDCD2-204ENST00000453163 SAA1P0DJI8 122 aaPredicted RBP16.48■□□□□ 0.23
PDCD2-204ENST00000453163 FOSL1P15407 271 aa16.48■□□□□ 0.23
PDCD2-204ENST00000453163 CASP6P55212 293 aa16.48■□□□□ 0.23
PDCD2-204ENST00000453163 MANBALQ9NQG1 85 aa16.48■□□□□ 0.23
PDCD2-204ENST00000453163 IGHV1-69-2A0A0G2JMI3 117 aa16.48■□□□□ 0.23
PDCD2-204ENST00000453163 J3QR06 171 aa16.48■□□□□ 0.23
PDCD2-204ENST00000453163 AMBPP02760 352 aa16.48■□□□□ 0.23
PDCD2-204ENST00000453163 OPRK1P41145 380 aa16.48■□□□□ 0.23
PDCD2-204ENST00000453163 RPUSD4Q96CM3 377 aaKnown RBP16.48■□□□□ 0.23
PDCD2-204ENST00000453163 SMIM7Q9BQ49 75 aa16.48■□□□□ 0.23
PDCD2-204ENST00000453163 PXMP4Q9Y6I8 212 aa16.48■□□□□ 0.23
PDCD2-204ENST00000453163 ABCA4P78363 2273 aa16.48■□□□□ 0.23
PDCD2-204ENST00000453163 PAGE4O60829 102 aa16.47■□□□□ 0.23
PDCD2-204ENST00000453163 GZMBP10144 247 aa16.47■□□□□ 0.23
PDCD2-204ENST00000453163 DIAPH2-AS1Q14236 149 aa16.47■□□□□ 0.23
PDCD2-204ENST00000453163 EFNB3Q15768 340 aa16.47■□□□□ 0.23
PDCD2-204ENST00000453163 OR4F5Q8NH21 305 aa16.47■□□□□ 0.23
PDCD2-204ENST00000453163 SSMEM1Q8WWF3 244 aa16.47■□□□□ 0.23
PDCD2-204ENST00000453163 OR4F4Q96R69 305 aa16.47■□□□□ 0.23
PDCD2-204ENST00000453163 NAT8Q9UHE5 227 aa16.47■□□□□ 0.23
PDCD2-204ENST00000453163 LSM4Q9Y4Z0 139 aaKnown RBP16.47■□□□□ 0.23
PDCD2-204ENST00000453163 DCHS2Q6V1P9 2916 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms