RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 ARTNQ5T4W7 220 aa4.65□□□□□ -1.66
CDC42BPA-209ENST00000448940 FGFBP3Q8TAT2 258 aa4.65□□□□□ -1.66
CDC42BPA-209ENST00000448940 MBD6Q96DN6 1003 aa4.65□□□□□ -1.66
CDC42BPA-209ENST00000448940 IGKV1D-43A0A0B4J1Z2 117 aa4.65□□□□□ -1.67
CDC42BPA-209ENST00000448940 PGA5P0DJD9 388 aa4.65□□□□□ -1.67
CDC42BPA-209ENST00000448940 NTF4P34130 210 aa4.65□□□□□ -1.67
CDC42BPA-209ENST00000448940 GDNFP39905 211 aa4.65□□□□□ -1.67
CDC42BPA-209ENST00000448940 SLC25A21Q9BQT8 299 aaPredicted RBP4.65□□□□□ -1.67
CDC42BPA-209ENST00000448940 NMNAT2Q9BZQ4 307 aa4.65□□□□□ -1.67
CDC42BPA-209ENST00000448940 Q9N2K0 584 aa4.65□□□□□ -1.67
CDC42BPA-209ENST00000448940 OR2W1Q9Y3N9 320 aa4.65□□□□□ -1.67
CDC42BPA-209ENST00000448940 TRAV8-6A0A0B4J262 113 aa4.65□□□□□ -1.67
CDC42BPA-209ENST00000448940 MPTX1A8MV57 137 aa4.65□□□□□ -1.67
CDC42BPA-209ENST00000448940 PDE6DO43924 150 aa4.65□□□□□ -1.67
CDC42BPA-209ENST00000448940 S1PR2O95136 353 aa4.65□□□□□ -1.67
CDC42BPA-209ENST00000448940 REG1AP05451 166 aa4.65□□□□□ -1.67
CDC42BPA-209ENST00000448940 ADIRFQ15847 76 aa4.65□□□□□ -1.67
CDC42BPA-209ENST00000448940 TCTEX1D1Q8N7M0 179 aa4.65□□□□□ -1.67
CDC42BPA-209ENST00000448940 ABHD14BQ96IU4 210 aa4.65□□□□□ -1.67
CDC42BPA-209ENST00000448940 DERL3Q96Q80 235 aa4.65□□□□□ -1.67
CDC42BPA-209ENST00000448940 FRRS1LQ9P0K9 344 aa4.65□□□□□ -1.67
CDC42BPA-209ENST00000448940 F8W735 103 aaPredicted RBP4.65□□□□□ -1.67
CDC42BPA-209ENST00000448940 SLC17A3O00476 420 aa4.65□□□□□ -1.67
CDC42BPA-209ENST00000448940 DNAL4O96015 105 aa4.65□□□□□ -1.67
CDC42BPA-209ENST00000448940 IGHA1P01876 353 aa4.65□□□□□ -1.67
CDC42BPA-209ENST00000448940 RPS27AP62979 156 aaKnown RBP4.65□□□□□ -1.67
CDC42BPA-209ENST00000448940 FAM219AQ8IW50 185 aa4.65□□□□□ -1.67
CDC42BPA-209ENST00000448940 RMI2Q96E14 147 aa4.65□□□□□ -1.67
CDC42BPA-209ENST00000448940 J3QL48 77 aa4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 IGLV1-44P01699 117 aa4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 PIGPP57054 158 aa4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 HIST1H1AQ02539 215 aaPredicted RBP4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 ZNF181Q2M3W8 571 aa4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 FAM122BQ7Z309 247 aa4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 TMEM101Q96IK0 257 aa4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 FUNDC2Q9BWH2 189 aa4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 NDUFB11Q9NX14 153 aa4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 MGPP08493 103 aa4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 SEM1Q6ZVN7 128 aa4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 NDUFA11Q86Y39 141 aa4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 ARRDC1Q8N5I2 433 aa4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 LFNGQ8NES3 379 aa4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 ZNF426Q9BUY5 554 aa4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 ALX4Q9H161 411 aaPredicted RBP4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 SLC25A5P05141 298 aaKnown RBP4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 IGHV1-8P0DP01 117 aa4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 FSTP19883 344 aa4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 SSTR5P35346 364 aa4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 C19orf54Q5BKX5 351 aa4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 TMEM78Q5T7P6 136 aa4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 HAPLN4Q86UW8 402 aa4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 TMED6Q8WW62 240 aa4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 THAP7Q9BT49 309 aaPredicted RBP4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 RPS10P5Q9NQ39 176 aa4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 IGHV2-26A0A0B4J1V2 119 aa4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 C9JCJ5 164 aa4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 MPDU1O75352 247 aa4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 HPRT1P00492 218 aa4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 MALP21145 153 aa4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 PSMB2P49721 201 aa4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 OR2B8PP59922 312 aa4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 TUSC1Q2TAM9 212 aa4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 GLMPQ8WWB7 406 aa4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 TP53RKQ96S44 253 aa4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 AMELYQ99218 206 aa4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 C11orf54Q9H0W9 315 aaPredicted RBP4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 SRD5A3Q9H8P0 318 aa4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 EXPH5Q8NEV8 1989 aa4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 H3BVH4 76 aa4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 TGFBR1P36897 503 aa4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 RPS10P46783 165 aaKnown RBP4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 DLX6P56179 175 aa4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 KRTAP10-9P60411 292 aa4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 PDPNQ86YL7 162 aa4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 G6PC2Q9NQR9 355 aa4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 ARL2-SNX15V9GYD0 113 aa4.64□□□□□ -1.67
CDC42BPA-209ENST00000448940 IGLV3-9A0A075B6K5 115 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 RBMY1BA6NDE4 496 aaKnown RBP4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 RBMY1EA6NEQ0 496 aaKnown RBP4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 SNAPINO95295 136 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 RBMY1DP0C7P1 496 aaKnown RBP4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 DANCRP0C864 163 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 HEPN1Q6WQI6 88 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 TMEM182Q6ZP80 229 aaPredicted RBP4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 OR10AG1Q8NH19 301 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 RARRES2Q99969 163 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 MTCH1Q9NZJ7 389 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 TRAV1-2A0A0B4J238 106 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 ETV2O00321 342 aaPredicted RBP4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 GPX1P07203 203 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 RHOGP84095 191 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 TWIST1Q15672 202 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 DMRTA1Q5VZB9 504 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 LINC00114Q6XXX2 140 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 ZNF66Q6ZN08 573 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 BAGE3Q86Y29 109 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 BAGE2Q86Y30 109 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 PARP16Q8N5Y8 322 aa4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 ZNF431Q8TF32 576 aaPredicted RBP4.63□□□□□ -1.67
CDC42BPA-209ENST00000448940 ZNRF4Q8WWF5 429 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms