RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 TXNL4BQ9NX01 149 aaKnown RBP9.9□□□□□ -0.82
HMGB3-204ENST00000448905 RHBDL2Q9NX52 303 aa9.9□□□□□ -0.82
HMGB3-204ENST00000448905 TNCP24821 2201 aa9.9□□□□□ -0.83
HMGB3-204ENST00000448905 A0A0A6YYH2 397 aa9.89□□□□□ -0.83
HMGB3-204ENST00000448905 A6NJ64 397 aa9.89□□□□□ -0.83
HMGB3-204ENST00000448905 ANKRD65E5RJM6 399 aa9.89□□□□□ -0.83
HMGB3-204ENST00000448905 K7EMT4 169 aa9.89□□□□□ -0.83
HMGB3-204ENST00000448905 SNAPC5O75971 98 aa9.89□□□□□ -0.83
HMGB3-204ENST00000448905 SERPINE2P07093 398 aa9.89□□□□□ -0.83
HMGB3-204ENST00000448905 OR13C7P0DN81 318 aa9.89□□□□□ -0.83
HMGB3-204ENST00000448905 RPA2P15927 270 aa9.89□□□□□ -0.83
HMGB3-204ENST00000448905 CBX5P45973 191 aa9.89□□□□□ -0.83
HMGB3-204ENST00000448905 SCAND1P57086 179 aa9.89□□□□□ -0.83
HMGB3-204ENST00000448905 POU2AF1Q16633 256 aa9.89□□□□□ -0.83
HMGB3-204ENST00000448905 OR1L8Q8NGR8 309 aa9.89□□□□□ -0.83
HMGB3-204ENST00000448905 FCGR1BQ92637 280 aa9.89□□□□□ -0.83
HMGB3-204ENST00000448905 RNF183Q96D59 192 aa9.89□□□□□ -0.83
HMGB3-204ENST00000448905 GALNT14Q96FL9 552 aa9.89□□□□□ -0.83
HMGB3-204ENST00000448905 C20orf24Q9BUV8 137 aa9.89□□□□□ -0.83
HMGB3-204ENST00000448905 IGLC7A0M8Q6 106 aa9.88□□□□□ -0.83
HMGB3-204ENST00000448905 OR2T8A6NH00 312 aa9.88□□□□□ -0.83
HMGB3-204ENST00000448905 CGB1A6NKQ9 187 aa9.88□□□□□ -0.83
HMGB3-204ENST00000448905 NDUFA4O00483 81 aa9.88□□□□□ -0.83
HMGB3-204ENST00000448905 PSMB9P28065 219 aa9.88□□□□□ -0.83
HMGB3-204ENST00000448905 FXYD4P59646 89 aa9.88□□□□□ -0.83
HMGB3-204ENST00000448905 DEFB135Q30KP9 77 aa9.88□□□□□ -0.83
HMGB3-204ENST00000448905 AADACL3Q5VUY0 350 aa9.88□□□□□ -0.83
HMGB3-204ENST00000448905 UBE2UQ5VVX9 321 aa9.88□□□□□ -0.83
HMGB3-204ENST00000448905 SFXN4Q6P4A7 337 aa9.88□□□□□ -0.83
HMGB3-204ENST00000448905 GDPD1Q8N9F7 314 aa9.88□□□□□ -0.83
HMGB3-204ENST00000448905 TSPAN14Q8NG11 270 aa9.88□□□□□ -0.83
HMGB3-204ENST00000448905 OR5AP2Q8NGF4 316 aa9.88□□□□□ -0.83
HMGB3-204ENST00000448905 TMEM190Q8WZ59 177 aa9.88□□□□□ -0.83
HMGB3-204ENST00000448905 TMEM140Q9NV12 185 aa9.88□□□□□ -0.83
HMGB3-204ENST00000448905 FKBP11Q9NYL4 201 aa9.88□□□□□ -0.83
HMGB3-204ENST00000448905 UBQLN2Q9UHD9 624 aa9.88□□□□□ -0.83
HMGB3-204ENST00000448905 ETV7Q9Y603 341 aa9.88□□□□□ -0.83
HMGB3-204ENST00000448905 TRAV3A0A0B4J244 114 aa9.87□□□□□ -0.83
HMGB3-204ENST00000448905 TEX50A0A1B0GTY4 177 aa9.87□□□□□ -0.83
HMGB3-204ENST00000448905 GABARAPL2P60520 117 aa9.87□□□□□ -0.83
HMGB3-204ENST00000448905 HERV-K104P61576 105 aa9.87□□□□□ -0.83
HMGB3-204ENST00000448905 IZUMO2Q6UXV1 221 aa9.87□□□□□ -0.83
HMGB3-204ENST00000448905 CMTM1Q8IZ96 169 aa9.87□□□□□ -0.83
HMGB3-204ENST00000448905 GVQW1Q8N7I0 195 aa9.87□□□□□ -0.83
HMGB3-204ENST00000448905 OR10W1Q8NGF6 305 aa9.87□□□□□ -0.83
HMGB3-204ENST00000448905 OR51H1Q8NH63 302 aa9.87□□□□□ -0.83
HMGB3-204ENST00000448905 LGALS14Q8TCE9 139 aa9.87□□□□□ -0.83
HMGB3-204ENST00000448905 TMEM56Q96MV1 263 aa9.87□□□□□ -0.83
HMGB3-204ENST00000448905 CMTM3Q96MX0 182 aa9.87□□□□□ -0.83
HMGB3-204ENST00000448905 HINT2Q9BX68 163 aa9.87□□□□□ -0.83
HMGB3-204ENST00000448905 C21orf62Q9NYP8 219 aa9.87□□□□□ -0.83
HMGB3-204ENST00000448905 COMMD9Q9P000 198 aa9.87□□□□□ -0.83
HMGB3-204ENST00000448905 RAB26Q9ULW5 256 aa9.87□□□□□ -0.83
HMGB3-204ENST00000448905 C15orf62A8K5M9 175 aa9.86□□□□□ -0.83
HMGB3-204ENST00000448905 IFNA4P05014 189 aa9.86□□□□□ -0.83
HMGB3-204ENST00000448905 SDC2P34741 201 aa9.86□□□□□ -0.83
HMGB3-204ENST00000448905 PAFAH1B2P68402 229 aa9.86□□□□□ -0.83
HMGB3-204ENST00000448905 RELQ04864 619 aaPredicted RBP9.86□□□□□ -0.83
HMGB3-204ENST00000448905 Q56UQ5 140 aa9.86□□□□□ -0.83
HMGB3-204ENST00000448905 IDNKQ5T6J7 187 aa9.86□□□□□ -0.83
HMGB3-204ENST00000448905 UBAC2Q8NBM4 344 aa9.86□□□□□ -0.83
HMGB3-204ENST00000448905 LSM10Q969L4 123 aaKnown RBP9.86□□□□□ -0.83
HMGB3-204ENST00000448905 CSTL1Q9H114 145 aa9.86□□□□□ -0.83
HMGB3-204ENST00000448905 MAP6D1Q9H9H5 199 aa9.86□□□□□ -0.83
HMGB3-204ENST00000448905 MPTX1A8MV57 137 aa9.85□□□□□ -0.83
HMGB3-204ENST00000448905 NUPL2O15504 423 aaKnown RBP9.85□□□□□ -0.83
HMGB3-204ENST00000448905 TMEM127O75204 238 aa9.85□□□□□ -0.83
HMGB3-204ENST00000448905 YIF1AO95070 293 aa9.85□□□□□ -0.83
HMGB3-204ENST00000448905 S1PR2O95136 353 aa9.85□□□□□ -0.83
HMGB3-204ENST00000448905 CD5P06127 495 aa9.85□□□□□ -0.83
HMGB3-204ENST00000448905 PTHLHP12272 177 aa9.85□□□□□ -0.83
HMGB3-204ENST00000448905 RPL35AP18077 110 aaKnown RBP9.85□□□□□ -0.83
HMGB3-204ENST00000448905 F2RP25116 425 aa9.85□□□□□ -0.83
HMGB3-204ENST00000448905 S100GP29377 79 aa9.85□□□□□ -0.83
HMGB3-204ENST00000448905 GNRHRP30968 328 aa9.85□□□□□ -0.83
HMGB3-204ENST00000448905 MXD1Q05195 221 aa9.85□□□□□ -0.83
HMGB3-204ENST00000448905 DHRS11Q6UWP2 260 aa9.85□□□□□ -0.83
HMGB3-204ENST00000448905 ZNF818PQ6ZRF7 136 aa9.85□□□□□ -0.83
HMGB3-204ENST00000448905 TMEM17Q86X19 198 aa9.85□□□□□ -0.83
HMGB3-204ENST00000448905 SPARTQ8N0X7 666 aa9.85□□□□□ -0.83
HMGB3-204ENST00000448905 CADM3Q8N126 398 aa9.85□□□□□ -0.83
HMGB3-204ENST00000448905 OR5B3Q8NH48 314 aa9.85□□□□□ -0.83
HMGB3-204ENST00000448905 SCARB1Q8WTV0 552 aa9.85□□□□□ -0.83
HMGB3-204ENST00000448905 PHLDA1Q8WV24 401 aaPredicted RBP9.85□□□□□ -0.83
HMGB3-204ENST00000448905 S100A16Q96FQ6 103 aaKnown RBP9.85□□□□□ -0.83
HMGB3-204ENST00000448905 TSC22D3Q99576 134 aa9.85□□□□□ -0.83
HMGB3-204ENST00000448905 YTHDF1Q9BYJ9 559 aaKnown RBP9.85□□□□□ -0.83
HMGB3-204ENST00000448905 MFFQ9GZY8 342 aa9.85□□□□□ -0.83
HMGB3-204ENST00000448905 AUNIPQ9H7T9 357 aa9.85□□□□□ -0.83
HMGB3-204ENST00000448905 IFT46Q9NQC8 304 aa9.85□□□□□ -0.83
HMGB3-204ENST00000448905 NDUFA4L2Q9NRX3 87 aa9.85□□□□□ -0.83
HMGB3-204ENST00000448905 OR51B2Q9Y5P1 312 aa9.85□□□□□ -0.83
HMGB3-204ENST00000448905 F11RQ9Y624 299 aaKnown RBP9.85□□□□□ -0.83
HMGB3-204ENST00000448905 MARCH11A6NNE9 402 aa9.84□□□□□ -0.83
HMGB3-204ENST00000448905 PGLYRP1O75594 196 aaPredicted RBP9.84□□□□□ -0.83
HMGB3-204ENST00000448905 KRASP01116 189 aa9.84□□□□□ -0.83
HMGB3-204ENST00000448905 CTSDP07339 412 aaPredicted RBP9.84□□□□□ -0.83
HMGB3-204ENST00000448905 LPAR6P43657 344 aa9.84□□□□□ -0.83
HMGB3-204ENST00000448905 WT1-ASQ06250 92 aa9.84□□□□□ -0.83
HMGB3-204ENST00000448905 LGALS9CQ6DKI2 356 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 237.2 ms