RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 K7EN84 100 aa7.53□□□□□ -1.2
COPB1-202ENST00000439561 HYPMO75409 117 aa7.53□□□□□ -1.2
COPB1-202ENST00000439561 CSN3P07498 182 aa7.53□□□□□ -1.2
COPB1-202ENST00000439561 PAX1P15863 534 aa7.53□□□□□ -1.2
COPB1-202ENST00000439561 ZNF137PP52743 207 aa7.53□□□□□ -1.2
COPB1-202ENST00000439561 TAS2R45P59539 299 aa7.53□□□□□ -1.2
COPB1-202ENST00000439561 PSG7Q13046 419 aa7.53□□□□□ -1.2
COPB1-202ENST00000439561 FBXW9Q5XUX1 488 aa7.53□□□□□ -1.2
COPB1-202ENST00000439561 BLNKQ8WV28 456 aa7.53□□□□□ -1.2
COPB1-202ENST00000439561 GMPPAQ96IJ6 420 aaPredicted RBP7.53□□□□□ -1.2
COPB1-202ENST00000439561 TPPP3Q9BW30 176 aa7.53□□□□□ -1.2
COPB1-202ENST00000439561 PRDM6Q9NQX0 595 aa7.53□□□□□ -1.2
COPB1-202ENST00000439561 ATG2AQ2TAZ0 1938 aa7.53□□□□□ -1.2
COPB1-202ENST00000439561 CA2P00918 260 aa7.53□□□□□ -1.2
COPB1-202ENST00000439561 MPV17P39210 176 aa7.53□□□□□ -1.2
COPB1-202ENST00000439561 MEOX1P50221 254 aa7.53□□□□□ -1.2
COPB1-202ENST00000439561 GFRA1P56159 465 aa7.53□□□□□ -1.2
COPB1-202ENST00000439561 YPEL3P61236 119 aaPredicted RBP7.53□□□□□ -1.2
COPB1-202ENST00000439561 UBE2G1P62253 170 aa7.53□□□□□ -1.2
COPB1-202ENST00000439561 PMCHL1Q16048 86 aa7.53□□□□□ -1.2
COPB1-202ENST00000439561 AP1S3Q96PC3 154 aa7.53□□□□□ -1.2
COPB1-202ENST00000439561 NABP2Q9BQ15 211 aa7.53□□□□□ -1.2
COPB1-202ENST00000439561 MT-ND6P03923 174 aa7.52□□□□□ -1.21
COPB1-202ENST00000439561 LGALS4P56470 323 aa7.52□□□□□ -1.21
COPB1-202ENST00000439561 TMEM164Q5U3C3 297 aa7.52□□□□□ -1.21
COPB1-202ENST00000439561 MOB3BQ86TA1 216 aa7.52□□□□□ -1.21
COPB1-202ENST00000439561 OR2T6Q8NHC8 308 aa7.52□□□□□ -1.21
COPB1-202ENST00000439561 TMEM45BQ96B21 275 aa7.52□□□□□ -1.21
COPB1-202ENST00000439561 OR8B2Q96RD0 313 aa7.52□□□□□ -1.21
COPB1-202ENST00000439561 TXNDC17Q9BRA2 123 aa7.52□□□□□ -1.21
COPB1-202ENST00000439561 ALKBH7Q9BT30 221 aaPredicted RBP7.52□□□□□ -1.21
COPB1-202ENST00000439561 TP53TG3Q9ULZ0 132 aa7.52□□□□□ -1.21
COPB1-202ENST00000439561 A0A1W2PS18 150 aa7.52□□□□□ -1.21
COPB1-202ENST00000439561 HLA-DQA1P01909 254 aa7.52□□□□□ -1.21
COPB1-202ENST00000439561 AMY1AP04745 511 aa7.52□□□□□ -1.21
COPB1-202ENST00000439561 CLDN18P56856 261 aa7.52□□□□□ -1.21
COPB1-202ENST00000439561 MRPS11P82912 194 aaKnown RBP7.52□□□□□ -1.21
COPB1-202ENST00000439561 RBMXL3Q8N7X1 1067 aaKnown RBP7.52□□□□□ -1.21
COPB1-202ENST00000439561 ZNRF1Q8ND25 227 aa7.52□□□□□ -1.21
COPB1-202ENST00000439561 KLF14Q8TD94 323 aaPredicted RBP7.52□□□□□ -1.21
COPB1-202ENST00000439561 RND1Q92730 232 aa7.52□□□□□ -1.21
COPB1-202ENST00000439561 LINC00479Q96M42 142 aa7.52□□□□□ -1.21
COPB1-202ENST00000439561 LINC00470Q9BZP3 86 aa7.52□□□□□ -1.21
COPB1-202ENST00000439561 TMEM167BQ9NRX6 74 aa7.52□□□□□ -1.21
COPB1-202ENST00000439561 CLEC5AQ9NY25 188 aa7.52□□□□□ -1.21
COPB1-202ENST00000439561 RNF114Q9Y508 228 aa7.52□□□□□ -1.21
COPB1-202ENST00000439561 PMS2P5A8MQ11 134 aa7.51□□□□□ -1.21
COPB1-202ENST00000439561 TNCP24821 2201 aa7.51□□□□□ -1.21
COPB1-202ENST00000439561 ZNF83P51522 516 aa7.51□□□□□ -1.21
COPB1-202ENST00000439561 RPL8P62917 257 aaKnown RBP7.51□□□□□ -1.21
COPB1-202ENST00000439561 KRTAP27-1Q3LI81 207 aa7.51□□□□□ -1.21
COPB1-202ENST00000439561 CENPVQ7Z7K6 275 aaPredicted RBP7.51□□□□□ -1.21
COPB1-202ENST00000439561 MAFAQ8NHW3 353 aaPredicted RBP7.51□□□□□ -1.21
COPB1-202ENST00000439561 C5orf30Q96GV9 206 aa7.51□□□□□ -1.21
COPB1-202ENST00000439561 ZNF703Q9H7S9 590 aaPredicted RBP7.51□□□□□ -1.21
COPB1-202ENST00000439561 UBE2ZQ9H832 354 aaPredicted RBP7.51□□□□□ -1.21
COPB1-202ENST00000439561 NPIPB11E5RHQ5 1161 aa7.51□□□□□ -1.21
COPB1-202ENST00000439561 J3QR06 171 aa7.51□□□□□ -1.21
COPB1-202ENST00000439561 SMPD2O60906 423 aa7.51□□□□□ -1.21
COPB1-202ENST00000439561 PRB4P10163 310 aaPredicted RBP7.51□□□□□ -1.21
COPB1-202ENST00000439561 PRDX2P32119 198 aa7.51□□□□□ -1.21
COPB1-202ENST00000439561 GAGE1Q13065 139 aa7.51□□□□□ -1.21
COPB1-202ENST00000439561 OR4S2Q8NH73 311 aa7.51□□□□□ -1.21
COPB1-202ENST00000439561 RNASE8Q8TDE3 154 aaKnown RBP7.51□□□□□ -1.21
COPB1-202ENST00000439561 CORO2AQ92828 525 aa7.51□□□□□ -1.21
COPB1-202ENST00000439561 DAZAP1Q96EP5 407 aaKnown RBP7.51□□□□□ -1.21
COPB1-202ENST00000439561 COQ2Q96H96 371 aa7.51□□□□□ -1.21
COPB1-202ENST00000439561 MBNL3Q9NUK0 354 aaKnown RBP7.51□□□□□ -1.21
COPB1-202ENST00000439561 MRPS18CQ9Y3D5 142 aaKnown RBP7.51□□□□□ -1.21
COPB1-202ENST00000439561 FRYLO94915 3013 aa7.51□□□□□ -1.21
COPB1-202ENST00000439561 H3BTX0 84 aa7.51□□□□□ -1.21
COPB1-202ENST00000439561 M0QZ24 198 aa7.51□□□□□ -1.21
COPB1-202ENST00000439561 SPRY3O43610 288 aa7.51□□□□□ -1.21
COPB1-202ENST00000439561 SNAI2O43623 268 aa7.51□□□□□ -1.21
COPB1-202ENST00000439561 COX7A2P2O60397 106 aa7.51□□□□□ -1.21
COPB1-202ENST00000439561 IGLC2P0DOY2 106 aa7.51□□□□□ -1.21
COPB1-202ENST00000439561 IGLC3P0DOY3 106 aa7.51□□□□□ -1.21
COPB1-202ENST00000439561 SSPNQ14714 243 aa7.51□□□□□ -1.21
COPB1-202ENST00000439561 OR4A47Q6IF82 309 aa7.51□□□□□ -1.21
COPB1-202ENST00000439561 PMCHL2Q9BQD1 86 aa7.51□□□□□ -1.21
COPB1-202ENST00000439561 MCRIP2Q9BUT9 160 aaKnown RBP7.51□□□□□ -1.21
COPB1-202ENST00000439561 CDC42EP3Q9UKI2 254 aa7.51□□□□□ -1.21
COPB1-202ENST00000439561 KLRC4-KLRK1H3BQV0 150 aa7.5□□□□□ -1.21
COPB1-202ENST00000439561 DUTP33316 252 aaKnown RBP7.5□□□□□ -1.21
COPB1-202ENST00000439561 NRN1LQ496H8 165 aa7.5□□□□□ -1.21
COPB1-202ENST00000439561 SLC35E4Q6ICL7 350 aa7.5□□□□□ -1.21
COPB1-202ENST00000439561 LHFPL4Q7Z7J7 247 aa7.5□□□□□ -1.21
COPB1-202ENST00000439561 CLEC7AQ9BXN2 247 aa7.5□□□□□ -1.21
COPB1-202ENST00000439561 GNB1LQ9BYB4 327 aa7.5□□□□□ -1.21
COPB1-202ENST00000439561 CXXC4Q9H2H0 198 aa7.5□□□□□ -1.21
COPB1-202ENST00000439561 ARFGEF3Q5TH69 2177 aa7.5□□□□□ -1.21
COPB1-202ENST00000439561 TRGV5A0A0B4J1U4 118 aa7.5□□□□□ -1.21
COPB1-202ENST00000439561 LY6G6EA0A0G2JKS1 128 aa7.5□□□□□ -1.21
COPB1-202ENST00000439561 APELAP0DMC3 54 aa7.5□□□□□ -1.21
COPB1-202ENST00000439561 CD46P15529 392 aa7.5□□□□□ -1.21
COPB1-202ENST00000439561 ZNF146Q15072 292 aa7.5□□□□□ -1.21
COPB1-202ENST00000439561 TNXAQ16473 311 aa7.5□□□□□ -1.21
COPB1-202ENST00000439561 MLANAQ16655 118 aa7.5□□□□□ -1.21
COPB1-202ENST00000439561 FAM201AQ5SY85 155 aa7.5□□□□□ -1.21
COPB1-202ENST00000439561 SSX8Q7RTT4 187 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms