RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 IGKV1-39P01597 117 aa10.55□□□□□ -0.72
CPNE4-201ENST00000429747 IGKV1D-39P04432 117 aa10.55□□□□□ -0.72
CPNE4-201ENST00000429747 RPL8P62917 257 aaKnown RBP10.55□□□□□ -0.72
CPNE4-201ENST00000429747 RBPJQ06330 500 aa10.55□□□□□ -0.72
CPNE4-201ENST00000429747 ZNF146Q15072 292 aa10.55□□□□□ -0.72
CPNE4-201ENST00000429747 AMMECR1Q9Y4X0 333 aaPredicted RBP10.55□□□□□ -0.72
CPNE4-201ENST00000429747 LGALS4P56470 323 aa10.55□□□□□ -0.72
CPNE4-201ENST00000429747 HIF1ANQ9NWT6 349 aa10.55□□□□□ -0.72
CPNE4-201ENST00000429747 METRNQ9UJH8 293 aa10.55□□□□□ -0.72
CPNE4-201ENST00000429747 LY6G6EA0A0G2JKS1 128 aa10.55□□□□□ -0.72
CPNE4-201ENST00000429747 OR4A8P0C604 315 aa10.55□□□□□ -0.72
CPNE4-201ENST00000429747 GZMBP10144 247 aa10.55□□□□□ -0.72
CPNE4-201ENST00000429747 SCGB2A2Q13296 93 aa10.55□□□□□ -0.72
CPNE4-201ENST00000429747 ZNF664Q8N3J9 261 aa10.55□□□□□ -0.72
CPNE4-201ENST00000429747 RPEQ96AT9 228 aa10.55□□□□□ -0.72
CPNE4-201ENST00000429747 FAM122AQ96E09 287 aa10.55□□□□□ -0.72
CPNE4-201ENST00000429747 WNT10AQ9GZT5 417 aa10.55□□□□□ -0.72
CPNE4-201ENST00000429747 RNASE7Q9H1E1 156 aaKnown RBP10.55□□□□□ -0.72
CPNE4-201ENST00000429747 DNAJC4Q9NNZ3 241 aa10.55□□□□□ -0.72
CPNE4-201ENST00000429747 U3KQA8 63 aa10.55□□□□□ -0.72
CPNE4-201ENST00000429747 HOXA4Q00056 320 aaPredicted RBP10.54□□□□□ -0.72
CPNE4-201ENST00000429747 FDCSPQ8NFU4 85 aa10.54□□□□□ -0.72
CPNE4-201ENST00000429747 TBL2Q9Y4P3 447 aaKnown RBP10.54□□□□□ -0.72
CPNE4-201ENST00000429747 TRBV6-6A0A0A6YYG2 114 aa10.54□□□□□ -0.72
CPNE4-201ENST00000429747 PGPA6NDG6 321 aa10.54□□□□□ -0.72
CPNE4-201ENST00000429747 ZNF503-AS2A6NEH8 195 aa10.54□□□□□ -0.72
CPNE4-201ENST00000429747 SIAH2O43255 324 aa10.54□□□□□ -0.72
CPNE4-201ENST00000429747 CRYABP02511 175 aaKnown RBP10.54□□□□□ -0.72
CPNE4-201ENST00000429747 REG1AP05451 166 aa10.54□□□□□ -0.72
CPNE4-201ENST00000429747 DUTP33316 252 aaKnown RBP10.54□□□□□ -0.72
CPNE4-201ENST00000429747 GNB2P62879 340 aa10.54□□□□□ -0.72
CPNE4-201ENST00000429747 FAM19A2Q8N3H0 131 aa10.54□□□□□ -0.72
CPNE4-201ENST00000429747 NPIPB3Q92617 1050 aa10.54□□□□□ -0.72
CPNE4-201ENST00000429747 MED13LQ71F56 2210 aa10.54□□□□□ -0.72
CPNE4-201ENST00000429747 LINC00473A8K010 186 aa10.54□□□□□ -0.72
CPNE4-201ENST00000429747 ZNF596Q8TC21 504 aa10.54□□□□□ -0.72
CPNE4-201ENST00000429747 PERPQ96FX8 193 aa10.54□□□□□ -0.72
CPNE4-201ENST00000429747 ASCL3Q9NQ33 180 aa10.54□□□□□ -0.72
CPNE4-201ENST00000429747 MKRN2OSH3BPM6 223 aa10.53□□□□□ -0.72
CPNE4-201ENST00000429747 ISLRO14498 428 aa10.53□□□□□ -0.72
CPNE4-201ENST00000429747 IGKV1D-33P01593 117 aa10.53□□□□□ -0.72
CPNE4-201ENST00000429747 IGKV1-33P01594 117 aa10.53□□□□□ -0.72
CPNE4-201ENST00000429747 TEX38Q6PEX7 206 aa10.53□□□□□ -0.72
CPNE4-201ENST00000429747 TREML4Q6UXN2 200 aa10.53□□□□□ -0.72
CPNE4-201ENST00000429747 TMEM106BQ9NUM4 274 aa10.53□□□□□ -0.72
CPNE4-201ENST00000429747 IDI2-AS1Q9NZ38 188 aa10.53□□□□□ -0.72
CPNE4-201ENST00000429747 SPRR3Q9UBC9 169 aa10.53□□□□□ -0.72
CPNE4-201ENST00000429747 COLQQ9Y215 455 aaPredicted RBP10.53□□□□□ -0.72
CPNE4-201ENST00000429747 A0A1W2PRD5 423 aa10.53□□□□□ -0.72
CPNE4-201ENST00000429747 A0A1W2PRF3 423 aa10.53□□□□□ -0.72
CPNE4-201ENST00000429747 A0A1W2PRM7 423 aa10.53□□□□□ -0.72
CPNE4-201ENST00000429747 OR4F17Q8NGA8 305 aa10.53□□□□□ -0.72
CPNE4-201ENST00000429747 UQCR10Q9UDW1 63 aa10.53□□□□□ -0.72
CPNE4-201ENST00000429747 TMEM265A0A087WTH1 108 aa10.53□□□□□ -0.72
CPNE4-201ENST00000429747 A0A1B0GUS0 222 aa10.53□□□□□ -0.72
CPNE4-201ENST00000429747 FAM157AC9JC47 383 aa10.53□□□□□ -0.72
CPNE4-201ENST00000429747 SLC25A17O43808 307 aa10.53□□□□□ -0.72
CPNE4-201ENST00000429747 AMY1AP04745 511 aa10.53□□□□□ -0.72
CPNE4-201ENST00000429747 PFN1P07737 140 aaKnown RBP10.53□□□□□ -0.72
CPNE4-201ENST00000429747 MORN2Q502X0 79 aa10.53□□□□□ -0.72
CPNE4-201ENST00000429747 GFRALQ6UXV0 394 aa10.53□□□□□ -0.72
CPNE4-201ENST00000429747 IGHV2OR16-5A0A0B4J2B6 119 aa10.52□□□□□ -0.72
CPNE4-201ENST00000429747 CD99P14209 185 aa10.52□□□□□ -0.72
CPNE4-201ENST00000429747 SPATA31B1PQ5VZV4 182 aa10.52□□□□□ -0.72
CPNE4-201ENST00000429747 GBGT1Q8N5D6 347 aa10.52□□□□□ -0.72
CPNE4-201ENST00000429747 FAM216BQ8N7L0 139 aa10.52□□□□□ -0.72
CPNE4-201ENST00000429747 GGTLC1Q9BX51 225 aa10.52□□□□□ -0.72
CPNE4-201ENST00000429747 TMEM191AQ9H0A3 160 aa10.52□□□□□ -0.72
CPNE4-201ENST00000429747 GP6Q9HCN6 339 aa10.52□□□□□ -0.72
CPNE4-201ENST00000429747 M0R296 226 aa10.52□□□□□ -0.73
CPNE4-201ENST00000429747 SELLP14151 372 aa10.52□□□□□ -0.73
CPNE4-201ENST00000429747 NHLH1Q02575 133 aa10.52□□□□□ -0.73
CPNE4-201ENST00000429747 EFNB3Q15768 340 aa10.52□□□□□ -0.73
CPNE4-201ENST00000429747 HAPLN4Q86UW8 402 aa10.52□□□□□ -0.73
CPNE4-201ENST00000429747 LTBP2Q14767 1821 aa10.52□□□□□ -0.73
CPNE4-201ENST00000429747 TRAV3A0A0B4J244 114 aa10.52□□□□□ -0.73
CPNE4-201ENST00000429747 OR5AL1P0C617 328 aa10.52□□□□□ -0.73
CPNE4-201ENST00000429747 C9orf106Q8NAJ2 232 aa10.52□□□□□ -0.73
CPNE4-201ENST00000429747 RNF138Q8WVD3 245 aa10.52□□□□□ -0.73
CPNE4-201ENST00000429747 ZNF714Q96N38 554 aa10.52□□□□□ -0.73
CPNE4-201ENST00000429747 GNB4Q9HAV0 340 aa10.52□□□□□ -0.73
CPNE4-201ENST00000429747 TIMP3P35625 211 aa10.51□□□□□ -0.73
CPNE4-201ENST00000429747 TNFSF10P50591 281 aa10.51□□□□□ -0.73
CPNE4-201ENST00000429747 FOXA3P55318 350 aaPredicted RBP10.51□□□□□ -0.73
CPNE4-201ENST00000429747 SMIM15Q7Z3B0 74 aa10.51□□□□□ -0.73
CPNE4-201ENST00000429747 WDR31Q8NA23 367 aa10.51□□□□□ -0.73
CPNE4-201ENST00000429747 SFXN3Q9BWM7 321 aa10.51□□□□□ -0.73
CPNE4-201ENST00000429747 ZNF430Q9H8G1 570 aaPredicted RBP10.51□□□□□ -0.73
CPNE4-201ENST00000429747 WASHC3Q9Y3C0 194 aa10.51□□□□□ -0.73
CPNE4-201ENST00000429747 TMSB15BA0A087X1C1 80 aa10.51□□□□□ -0.73
CPNE4-201ENST00000429747 AHRRA9YTQ3 701 aa10.51□□□□□ -0.73
CPNE4-201ENST00000429747 DLL1O00548 723 aa10.51□□□□□ -0.73
CPNE4-201ENST00000429747 STXBP6Q8NFX7 210 aa10.51□□□□□ -0.73
CPNE4-201ENST00000429747 EAF1Q96JC9 268 aaPredicted RBP10.51□□□□□ -0.73
CPNE4-201ENST00000429747 ONECUT1Q9UBC0 465 aa10.51□□□□□ -0.73
CPNE4-201ENST00000429747 INSIG2Q9Y5U4 225 aa10.51□□□□□ -0.73
CPNE4-201ENST00000429747 ABCA4P78363 2273 aa10.51□□□□□ -0.73
CPNE4-201ENST00000429747 INTS1Q8N201 2190 aaKnown RBP10.51□□□□□ -0.73
CPNE4-201ENST00000429747 TRGV8A0A0C4DH27 118 aa10.51□□□□□ -0.73
CPNE4-201ENST00000429747 KRTCAP3Q53RY4 240 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms