RNA–Protein interactions for RNA: ENST00000428650.5

STRC-201, Transcript of stereocilin, humanhuman

TSL 5

Gene STRC, Length 5,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-201ENST00000428650 PNKDQ8N490 385 aa12.12□□□□□ -0.47
STRC-201ENST00000428650 UPK2O00526 184 aa12.12□□□□□ -0.47
STRC-201ENST00000428650 RRHO14718 337 aa12.12□□□□□ -0.47
STRC-201ENST00000428650 GAS1P54826 345 aa12.12□□□□□ -0.47
STRC-201ENST00000428650 KLRB1Q12918 225 aa12.12□□□□□ -0.47
STRC-201ENST00000428650 LOC107984156A0A0G2JMH3 177 aa12.12□□□□□ -0.47
STRC-201ENST00000428650 SIGLEC5O15389 551 aa12.12□□□□□ -0.47
STRC-201ENST00000428650 CBLN1P23435 193 aa12.12□□□□□ -0.47
STRC-201ENST00000428650 ICAM4Q14773 271 aa12.12□□□□□ -0.47
STRC-201ENST00000428650 TGIF1Q15583 401 aa12.12□□□□□ -0.47
STRC-201ENST00000428650 RPL39P5Q59GN2 51 aa12.12□□□□□ -0.47
STRC-201ENST00000428650 FAM159AQ6UWV7 190 aa12.12□□□□□ -0.47
STRC-201ENST00000428650 ARL17AQ8IVW1 177 aa12.12□□□□□ -0.47
STRC-201ENST00000428650 TNFRSF14Q92956 283 aa12.12□□□□□ -0.47
STRC-201ENST00000428650 ASCC3Q8N3C0 2202 aaKnown RBP12.12□□□□□ -0.47
STRC-201ENST00000428650 BRWD3Q6RI45 1802 aa12.12□□□□□ -0.47
STRC-201ENST00000428650 IGKV3-7A0A075B6H7 116 aa12.12□□□□□ -0.47
STRC-201ENST00000428650 RAMP1O60894 148 aa12.12□□□□□ -0.47
STRC-201ENST00000428650 CFHR1Q03591 330 aa12.12□□□□□ -0.47
STRC-201ENST00000428650 NR2C2APQ86WQ0 139 aa12.12□□□□□ -0.47
STRC-201ENST00000428650 FAM57AQ8TBR7 257 aa12.12□□□□□ -0.47
STRC-201ENST00000428650 SGK494Q96LW2 274 aa12.12□□□□□ -0.47
STRC-201ENST00000428650 MOB4Q9Y3A3 225 aa12.12□□□□□ -0.47
STRC-201ENST00000428650 TRBV20OR9-2A0A075B6H5 130 aa12.11□□□□□ -0.47
STRC-201ENST00000428650 C15orf61A6NNL5 157 aa12.11□□□□□ -0.47
STRC-201ENST00000428650 CRXO43186 299 aaPredicted RBP12.11□□□□□ -0.47
STRC-201ENST00000428650 STAG3L3P0CL85 134 aa12.11□□□□□ -0.47
STRC-201ENST00000428650 CSRP2Q16527 193 aa12.11□□□□□ -0.47
STRC-201ENST00000428650 CBLN4Q9NTU7 201 aa12.11□□□□□ -0.47
STRC-201ENST00000428650 ASIPP42127 132 aa12.11□□□□□ -0.47
STRC-201ENST00000428650 UQCRFS1P47985 274 aa12.11□□□□□ -0.47
STRC-201ENST00000428650 RPL23P62829 140 aaKnown RBP12.11□□□□□ -0.47
STRC-201ENST00000428650 OR13A1Q8NGR1 328 aa12.11□□□□□ -0.47
STRC-201ENST00000428650 WBP1Q96G27 269 aa12.11□□□□□ -0.47
STRC-201ENST00000428650 ALKBH7Q9BT30 221 aaPredicted RBP12.11□□□□□ -0.47
STRC-201ENST00000428650 RFPL3SP0C7P2 107 aa12.11□□□□□ -0.47
STRC-201ENST00000428650 IGFBP2P18065 325 aa12.11□□□□□ -0.47
STRC-201ENST00000428650 HTN1P15515 57 aa12.11□□□□□ -0.47
STRC-201ENST00000428650 TFF3Q07654 80 aa12.11□□□□□ -0.47
STRC-201ENST00000428650 OR10J3Q5JRS4 329 aa12.11□□□□□ -0.47
STRC-201ENST00000428650 TTC9CQ8N5M4 171 aa12.11□□□□□ -0.47
STRC-201ENST00000428650 CGAP01215 116 aa12.1□□□□□ -0.47
STRC-201ENST00000428650 ACSF3Q4G176 576 aaPredicted RBP12.1□□□□□ -0.47
STRC-201ENST00000428650 C1QL4Q86Z23 238 aa12.1□□□□□ -0.47
STRC-201ENST00000428650 SLC50A1Q9BRV3 221 aa12.1□□□□□ -0.47
STRC-201ENST00000428650 FOXJ2Q9P0K8 574 aa12.1□□□□□ -0.47
STRC-201ENST00000428650 CEACAM1P13688 526 aa12.1□□□□□ -0.47
STRC-201ENST00000428650 NEU1Q99519 415 aa12.1□□□□□ -0.47
STRC-201ENST00000428650 RTN4RQ9BZR6 473 aa12.1□□□□□ -0.47
STRC-201ENST00000428650 GSN-AS1Q9NRJ2 163 aa12.1□□□□□ -0.47
STRC-201ENST00000428650 TBL2Q9Y4P3 447 aaKnown RBP12.1□□□□□ -0.47
STRC-201ENST00000428650 IGKV3D-15A0A087WSY6 115 aa12.1□□□□□ -0.47
STRC-201ENST00000428650 GRIFINA4D1Z8 144 aa12.1□□□□□ -0.47
STRC-201ENST00000428650 GPHA2Q96T91 129 aa12.1□□□□□ -0.47
STRC-201ENST00000428650 VKORC1L1Q8N0U8 176 aa12.1□□□□□ -0.47
STRC-201ENST00000428650 ATG2BQ96BY7 2078 aa12.1□□□□□ -0.47
STRC-201ENST00000428650 XIRP1Q702N8 1843 aaKnown RBP12.1□□□□□ -0.47
STRC-201ENST00000428650 PSG7Q13046 419 aa12.1□□□□□ -0.47
STRC-201ENST00000428650 ATP5L2Q7Z4Y8 100 aa12.1□□□□□ -0.47
STRC-201ENST00000428650 C21orf62Q9NYP8 219 aa12.1□□□□□ -0.47
STRC-201ENST00000428650 LHX2P50458 406 aa12.09□□□□□ -0.47
STRC-201ENST00000428650 SIGLEC12Q96PQ1 595 aa12.09□□□□□ -0.47
STRC-201ENST00000428650 SCO2A0A1W2PP80 73 aa12.09□□□□□ -0.47
STRC-201ENST00000428650 UBE2CO00762 179 aa12.09□□□□□ -0.47
STRC-201ENST00000428650 LHFPL1Q86WI0 220 aa12.09□□□□□ -0.47
STRC-201ENST00000428650 CRIPAKQ8N1N5 446 aa12.09□□□□□ -0.47
STRC-201ENST00000428650 EFEMP2O95967 443 aa12.09□□□□□ -0.47
STRC-201ENST00000428650 MOSP00540 346 aa12.09□□□□□ -0.47
STRC-201ENST00000428650 SRSF4Q08170 494 aaKnown RBP12.09□□□□□ -0.47
STRC-201ENST00000428650 ZNF324BQ6AW86 544 aaPredicted RBP12.09□□□□□ -0.47
STRC-201ENST00000428650 ZNRF1Q8ND25 227 aa12.09□□□□□ -0.47
STRC-201ENST00000428650 ASCL2Q99929 193 aa12.09□□□□□ -0.47
STRC-201ENST00000428650 GNB1LQ9BYB4 327 aa12.09□□□□□ -0.47
STRC-201ENST00000428650 PRDM13Q9H4Q3 707 aa12.09□□□□□ -0.47
STRC-201ENST00000428650 PPBPP02775 128 aa12.09□□□□□ -0.47
STRC-201ENST00000428650 MBNL2Q5VZF2 373 aaKnown RBP12.09□□□□□ -0.47
STRC-201ENST00000428650 ORMDL3Q8N138 153 aa12.09□□□□□ -0.47
STRC-201ENST00000428650 VWCEQ96DN2 955 aa12.09□□□□□ -0.47
STRC-201ENST00000428650 CRYGSP22914 178 aa12.08□□□□□ -0.48
STRC-201ENST00000428650 IGHV1-2P23083 117 aa12.08□□□□□ -0.48
STRC-201ENST00000428650 PRSS8Q16651 343 aa12.08□□□□□ -0.48
STRC-201ENST00000428650 KIAA1644Q3SXP7 199 aa12.08□□□□□ -0.48
STRC-201ENST00000428650 GEMIN7Q9H840 131 aaKnown RBP12.08□□□□□ -0.48
STRC-201ENST00000428650 TMEM74BQ9NUR3 256 aa12.08□□□□□ -0.48
STRC-201ENST00000428650 C7orf71A4D174 169 aa12.08□□□□□ -0.48
STRC-201ENST00000428650 CD5P06127 495 aa12.08□□□□□ -0.48
STRC-201ENST00000428650 RASL11AQ6T310 242 aa12.08□□□□□ -0.48
STRC-201ENST00000428650 LEAP2Q969E1 77 aa12.08□□□□□ -0.48
STRC-201ENST00000428650 SEC16AO15027 2179 aa12.08□□□□□ -0.48
STRC-201ENST00000428650 TRBV24-1A0A075B6N3 115 aa12.08□□□□□ -0.48
STRC-201ENST00000428650 ARPC1AQ92747 370 aa12.08□□□□□ -0.48
STRC-201ENST00000428650 SSBP3Q9BWW4 388 aaPredicted RBP12.08□□□□□ -0.48
STRC-201ENST00000428650 PDCD11Q14690 1871 aaKnown RBP12.08□□□□□ -0.48
STRC-201ENST00000428650 NPFFO15130 113 aa12.07□□□□□ -0.48
STRC-201ENST00000428650 LDLRAD4O15165 306 aa12.07□□□□□ -0.48
STRC-201ENST00000428650 LYZL4Q96KX0 146 aa12.07□□□□□ -0.48
STRC-201ENST00000428650 IGKV1-9A0A0C4DH69 117 aa12.07□□□□□ -0.48
STRC-201ENST00000428650 RNF224P0DH78 156 aa12.07□□□□□ -0.48
STRC-201ENST00000428650 PAQR4Q8N4S7 273 aaPredicted RBP12.07□□□□□ -0.48
STRC-201ENST00000428650 WDR83OSQ9Y284 106 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms