RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 HOXB5P09067 269 aa11.88□□□□□ -0.51
VARS2-203ENST00000428017 CD28P10747 220 aa11.88□□□□□ -0.51
VARS2-203ENST00000428017 HSPE1P61604 102 aaKnown RBP11.88□□□□□ -0.51
VARS2-203ENST00000428017 CFHR3Q02985 330 aa11.88□□□□□ -0.51
VARS2-203ENST00000428017 C10orf99Q6UWK7 81 aa11.88□□□□□ -0.51
VARS2-203ENST00000428017 ZNF429Q86V71 674 aa11.88□□□□□ -0.51
VARS2-203ENST00000428017 MINDY2Q8NBR6 621 aa11.88□□□□□ -0.51
VARS2-203ENST00000428017 OR5T1Q8NG75 326 aa11.88□□□□□ -0.51
VARS2-203ENST00000428017 MITD1Q8WV92 249 aa11.88□□□□□ -0.51
VARS2-203ENST00000428017 COA4Q9NYJ1 87 aa11.88□□□□□ -0.51
VARS2-203ENST00000428017 A0A1B0GU03 582 aa11.87□□□□□ -0.51
VARS2-203ENST00000428017 TCRBV4S1A1TA0A5B7 111 aa11.87□□□□□ -0.51
VARS2-203ENST00000428017 DBX1A6NMT0 343 aa11.87□□□□□ -0.51
VARS2-203ENST00000428017 TEX22C9J3V5 150 aa11.87□□□□□ -0.51
VARS2-203ENST00000428017 PPIFP30405 207 aaKnown RBP11.87□□□□□ -0.51
VARS2-203ENST00000428017 SMCO1Q147U7 214 aa11.87□□□□□ -0.51
VARS2-203ENST00000428017 C19orf54Q5BKX5 351 aa11.87□□□□□ -0.51
VARS2-203ENST00000428017 NMSQ5H8A3 153 aa11.87□□□□□ -0.51
VARS2-203ENST00000428017 C12orf45Q8N5I9 185 aaPredicted RBP11.87□□□□□ -0.51
VARS2-203ENST00000428017 OR1S1Q8NH92 325 aa11.87□□□□□ -0.51
VARS2-203ENST00000428017 FAM110DQ8TAY7 271 aaPredicted RBP11.87□□□□□ -0.51
VARS2-203ENST00000428017 WIPF2Q8TF74 440 aaPredicted RBP11.87□□□□□ -0.51
VARS2-203ENST00000428017 MARVELD1Q9BSK0 173 aa11.87□□□□□ -0.51
VARS2-203ENST00000428017 PLEKHA3Q9HB20 300 aa11.87□□□□□ -0.51
VARS2-203ENST00000428017 ENY2Q9NPA8 101 aa11.87□□□□□ -0.51
VARS2-203ENST00000428017 NDUFA4L2Q9NRX3 87 aa11.87□□□□□ -0.51
VARS2-203ENST00000428017 FBN1P35555 2871 aaKnown RBP11.86□□□□□ -0.51
VARS2-203ENST00000428017 ST8SIA3O43173 380 aa11.86□□□□□ -0.51
VARS2-203ENST00000428017 OR13C7P0DN81 318 aa11.86□□□□□ -0.51
VARS2-203ENST00000428017 DEFA4P12838 97 aa11.86□□□□□ -0.51
VARS2-203ENST00000428017 SPNP16150 400 aa11.86□□□□□ -0.51
VARS2-203ENST00000428017 KRTAP10-3P60369 221 aa11.86□□□□□ -0.51
VARS2-203ENST00000428017 PRCDQ00LT1 54 aa11.86□□□□□ -0.51
VARS2-203ENST00000428017 SRSF4Q08170 494 aaKnown RBP11.86□□□□□ -0.51
VARS2-203ENST00000428017 ASPHD1Q5U4P2 390 aa11.86□□□□□ -0.51
VARS2-203ENST00000428017 GGNBP1Q5YKI7 109 aa11.86□□□□□ -0.51
VARS2-203ENST00000428017 Q6ZRM9 215 aa11.86□□□□□ -0.51
VARS2-203ENST00000428017 TTC9CQ8N5M4 171 aa11.86□□□□□ -0.51
VARS2-203ENST00000428017 SPATA3Q8NHX4 192 aa11.86□□□□□ -0.51
VARS2-203ENST00000428017 MS4A10Q96PG2 267 aa11.86□□□□□ -0.51
VARS2-203ENST00000428017 CITED1Q99966 193 aa11.86□□□□□ -0.51
VARS2-203ENST00000428017 CITED2Q99967 270 aaPredicted RBP11.86□□□□□ -0.51
VARS2-203ENST00000428017 SLA2Q9H6Q3 261 aa11.86□□□□□ -0.51
VARS2-203ENST00000428017 NPIPB5A8MRT5 1133 aa11.85□□□□□ -0.51
VARS2-203ENST00000428017 E7EUB6 86 aa11.85□□□□□ -0.51
VARS2-203ENST00000428017 H3BUA1 57 aa11.85□□□□□ -0.51
VARS2-203ENST00000428017 CYB5BO43169 146 aa11.85□□□□□ -0.51
VARS2-203ENST00000428017 ADAP1O75689 374 aa11.85□□□□□ -0.51
VARS2-203ENST00000428017 IGLV1-40P01703 118 aa11.85□□□□□ -0.51
VARS2-203ENST00000428017 SLC25A6P12236 298 aa11.85□□□□□ -0.51
VARS2-203ENST00000428017 AREGP15514 252 aa11.85□□□□□ -0.51
VARS2-203ENST00000428017 PSMB8P28062 276 aa11.85□□□□□ -0.51
VARS2-203ENST00000428017 PSMB6P28072 239 aa11.85□□□□□ -0.51
VARS2-203ENST00000428017 HOXA1P49639 335 aaPredicted RBP11.85□□□□□ -0.51
VARS2-203ENST00000428017 SPCS3P61009 180 aa11.85□□□□□ -0.51
VARS2-203ENST00000428017 OR10W1Q8NGF6 305 aa11.85□□□□□ -0.51
VARS2-203ENST00000428017 OR52E5Q8NH55 327 aa11.85□□□□□ -0.51
VARS2-203ENST00000428017 ZFP57Q9NU63 452 aa11.85□□□□□ -0.51
VARS2-203ENST00000428017 TSSC4Q9Y5U2 329 aaPredicted RBP11.85□□□□□ -0.51
VARS2-203ENST00000428017 A0A1B0GW64 132 aa11.84□□□□□ -0.51
VARS2-203ENST00000428017 IGLC7A0M8Q6 106 aa11.84□□□□□ -0.51
VARS2-203ENST00000428017 CGB1A6NKQ9 187 aa11.84□□□□□ -0.51
VARS2-203ENST00000428017 CEBPZOSA8MTT3 80 aa11.84□□□□□ -0.51
VARS2-203ENST00000428017 SNRPGP15A8MWD9 76 aa11.84□□□□□ -0.51
VARS2-203ENST00000428017 SOX15O60248 233 aa11.84□□□□□ -0.51
VARS2-203ENST00000428017 TRGV3P03979 118 aa11.84□□□□□ -0.51
VARS2-203ENST00000428017 RPLP1P05386 114 aaKnown RBP11.84□□□□□ -0.51
VARS2-203ENST00000428017 REG1AP05451 166 aa11.84□□□□□ -0.51
VARS2-203ENST00000428017 RAB9AP51151 201 aa11.84□□□□□ -0.51
VARS2-203ENST00000428017 TPPP2P59282 170 aa11.84□□□□□ -0.51
VARS2-203ENST00000428017 ERHP84090 104 aaKnown RBP11.84□□□□□ -0.51
VARS2-203ENST00000428017 CD83Q01151 205 aa11.84□□□□□ -0.51
VARS2-203ENST00000428017 SPINK9Q5DT21 86 aa11.84□□□□□ -0.51
VARS2-203ENST00000428017 TCTEX1D4Q5JR98 221 aa11.84□□□□□ -0.51
VARS2-203ENST00000428017 LCNL1Q6ZST4 164 aa11.84□□□□□ -0.51
VARS2-203ENST00000428017 NDUFA11Q86Y39 141 aa11.84□□□□□ -0.51
VARS2-203ENST00000428017 COL6A5A8TX70 2615 aa11.83□□□□□ -0.52
VARS2-203ENST00000428017 C13orf42A0A1B0GVH6 325 aa11.83□□□□□ -0.52
VARS2-203ENST00000428017 A0A1W2PRX2 142 aa11.83□□□□□ -0.52
VARS2-203ENST00000428017 NUDT19A8MXV4 375 aa11.83□□□□□ -0.52
VARS2-203ENST00000428017 FAM25EA8MYX2 175 aa11.83□□□□□ -0.52
VARS2-203ENST00000428017 SSNA1O43805 119 aa11.83□□□□□ -0.52
VARS2-203ENST00000428017 NXPH3O95157 252 aa11.83□□□□□ -0.52
VARS2-203ENST00000428017 NSUN5P1Q3KNT7 163 aa11.83□□□□□ -0.52
VARS2-203ENST00000428017 AARDQ4LEZ3 155 aa11.83□□□□□ -0.52
VARS2-203ENST00000428017 RNF152Q8N8N0 203 aa11.83□□□□□ -0.52
VARS2-203ENST00000428017 KLK15Q9H2R5 256 aa11.83□□□□□ -0.52
VARS2-203ENST00000428017 C5orf51A6NDU8 294 aa11.82□□□□□ -0.52
VARS2-203ENST00000428017 PRH1P02810 166 aa11.82□□□□□ -0.52
VARS2-203ENST00000428017 CRYGCP07315 174 aa11.82□□□□□ -0.52
VARS2-203ENST00000428017 HIST1H1BP16401 226 aaKnown RBP11.82□□□□□ -0.52
VARS2-203ENST00000428017 CTRB1P17538 263 aa11.82□□□□□ -0.52
VARS2-203ENST00000428017 SNCAP37840 140 aa11.82□□□□□ -0.52
VARS2-203ENST00000428017 RPL23AP62750 156 aaKnown RBP11.82□□□□□ -0.52
VARS2-203ENST00000428017 WT1-ASQ06250 92 aa11.82□□□□□ -0.52
VARS2-203ENST00000428017 TATDN3Q17R31 274 aa11.82□□□□□ -0.52
VARS2-203ENST00000428017 IAH1Q2TAA2 248 aaPredicted RBP11.82□□□□□ -0.52
VARS2-203ENST00000428017 HIST2H2BDQ6DRA6 164 aa11.82□□□□□ -0.52
VARS2-203ENST00000428017 CTRB2Q6GPI1 263 aa11.82□□□□□ -0.52
VARS2-203ENST00000428017 OR1L6Q8NGR2 347 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms