RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 DUSP18Q8NEJ0 188 aa6.34□□□□□ -1.39
LSG1-202ENST00000427461 GGHQ92820 318 aa6.34□□□□□ -1.39
LSG1-202ENST00000427461 MRPL48Q96GC5 212 aaKnown RBP6.34□□□□□ -1.39
LSG1-202ENST00000427461 UHRF2Q96PU4 802 aa6.34□□□□□ -1.39
LSG1-202ENST00000427461 RAB40CQ96S21 281 aa6.34□□□□□ -1.39
LSG1-202ENST00000427461 NEU1Q99519 415 aa6.34□□□□□ -1.39
LSG1-202ENST00000427461 CIB1Q99828 191 aa6.34□□□□□ -1.39
LSG1-202ENST00000427461 YTHDF2Q9Y5A9 579 aaKnown RBP6.34□□□□□ -1.39
LSG1-202ENST00000427461 TRAV2A0A0B4J234 112 aa6.33□□□□□ -1.4
LSG1-202ENST00000427461 TRBV5-5A0A0J9YX44 114 aa6.33□□□□□ -1.4
LSG1-202ENST00000427461 A0A1W2PPQ1 181 aa6.33□□□□□ -1.4
LSG1-202ENST00000427461 TRDCB7Z8K6 153 aa6.33□□□□□ -1.4
LSG1-202ENST00000427461 PLA2G1BP04054 148 aaKnown RBP6.33□□□□□ -1.4
LSG1-202ENST00000427461 HLA-GP17693 338 aa6.33□□□□□ -1.4
LSG1-202ENST00000427461 SRMP19623 302 aa6.33□□□□□ -1.4
LSG1-202ENST00000427461 GCSHP23434 173 aa6.33□□□□□ -1.4
LSG1-202ENST00000427461 FXYD7P58549 80 aa6.33□□□□□ -1.4
LSG1-202ENST00000427461 RPL8P62917 257 aaKnown RBP6.33□□□□□ -1.4
LSG1-202ENST00000427461 UNC119Q13432 240 aa6.33□□□□□ -1.4
LSG1-202ENST00000427461 RPL22L1Q6P5R6 122 aaKnown RBP6.33□□□□□ -1.4
LSG1-202ENST00000427461 CBR4Q8N4T8 237 aa6.33□□□□□ -1.4
LSG1-202ENST00000427461 STXBP6Q8NFX7 210 aa6.33□□□□□ -1.4
LSG1-202ENST00000427461 VSTM2AQ8TAG5 236 aa6.33□□□□□ -1.4
LSG1-202ENST00000427461 C1QTNF4Q9BXJ3 329 aa6.33□□□□□ -1.4
LSG1-202ENST00000427461 VSIRQ9H7M9 311 aa6.33□□□□□ -1.4
LSG1-202ENST00000427461 CKLFQ9UBR5 152 aa6.33□□□□□ -1.4
LSG1-202ENST00000427461 RFNGQ9Y644 331 aa6.33□□□□□ -1.4
LSG1-202ENST00000427461 TRAV3A0A0B4J244 114 aa6.32□□□□□ -1.4
LSG1-202ENST00000427461 TEX48A0A1B0GUV7 120 aa6.32□□□□□ -1.4
LSG1-202ENST00000427461 SMIM9A6NGZ8 99 aa6.32□□□□□ -1.4
LSG1-202ENST00000427461 G3V2T6 193 aa6.32□□□□□ -1.4
LSG1-202ENST00000427461 K7EIM0 57 aa6.32□□□□□ -1.4
LSG1-202ENST00000427461 OXTP01178 125 aa6.32□□□□□ -1.4
LSG1-202ENST00000427461 EIF4EP06730 217 aaKnown RBP6.32□□□□□ -1.4
LSG1-202ENST00000427461 P0C879 139 aa6.32□□□□□ -1.4
LSG1-202ENST00000427461 GNB3P16520 340 aa6.32□□□□□ -1.4
LSG1-202ENST00000427461 SERPINB10P48595 397 aa6.32□□□□□ -1.4
LSG1-202ENST00000427461 BRWD1-AS2P59051 145 aa6.32□□□□□ -1.4
LSG1-202ENST00000427461 ERVFC1-1P60608 527 aa6.32□□□□□ -1.4
LSG1-202ENST00000427461 RPS11P62280 158 aaKnown RBP eCLIP6.32□□□□□ -1.4
LSG1-202ENST00000427461 KCTD9Q7L273 389 aa6.32□□□□□ -1.4
LSG1-202ENST00000427461 OR10J5Q8NHC4 309 aa6.32□□□□□ -1.4
LSG1-202ENST00000427461 RNF141Q8WVD5 230 aa6.32□□□□□ -1.4
LSG1-202ENST00000427461 TM2D1Q9BX74 207 aa6.32□□□□□ -1.4
LSG1-202ENST00000427461 TMEM59Q9BXS4 323 aa6.32□□□□□ -1.4
LSG1-202ENST00000427461 AMBNQ9NP70 447 aa6.32□□□□□ -1.4
LSG1-202ENST00000427461 MGAT4AQ9UM21 535 aa6.32□□□□□ -1.4
LSG1-202ENST00000427461 TNFRSF18Q9Y5U5 241 aa6.32□□□□□ -1.4
LSG1-202ENST00000427461 TRBV6-7A0A0A0MS04 114 aa6.31□□□□□ -1.4
LSG1-202ENST00000427461 AQP12BA6NM10 295 aa6.31□□□□□ -1.4
LSG1-202ENST00000427461 F5H768 121 aa6.31□□□□□ -1.4
LSG1-202ENST00000427461 FABP7O15540 132 aa6.31□□□□□ -1.4
LSG1-202ENST00000427461 DCTN3O75935 186 aa6.31□□□□□ -1.4
LSG1-202ENST00000427461 CD5P06127 495 aa6.31□□□□□ -1.4
LSG1-202ENST00000427461 CELP19835 753 aa6.31□□□□□ -1.4
LSG1-202ENST00000427461 RELQ04864 619 aaPredicted RBP6.31□□□□□ -1.4
LSG1-202ENST00000427461 CLINT1Q14677 625 aa6.31□□□□□ -1.4
LSG1-202ENST00000427461 Q499Y3 187 aa6.31□□□□□ -1.4
LSG1-202ENST00000427461 TMEM69Q5SWH9 247 aa6.31□□□□□ -1.4
LSG1-202ENST00000427461 SPATA24Q86W54 205 aa6.31□□□□□ -1.4
LSG1-202ENST00000427461 AQP12AQ8IXF9 295 aa6.31□□□□□ -1.4
LSG1-202ENST00000427461 CDH26Q8IXH8 852 aa6.31□□□□□ -1.4
LSG1-202ENST00000427461 GDPD1Q8N9F7 314 aa6.31□□□□□ -1.4
LSG1-202ENST00000427461 OR4A4PQ8NGN8 299 aa6.31□□□□□ -1.4
LSG1-202ENST00000427461 MAFIPQ8WZ33 124 aa6.31□□□□□ -1.4
LSG1-202ENST00000427461 GRAMD2BQ96HH9 432 aa6.31□□□□□ -1.4
LSG1-202ENST00000427461 GPHA2Q96T91 129 aa6.31□□□□□ -1.4
LSG1-202ENST00000427461 CMSS1Q9BQ75 279 aaKnown RBP6.31□□□□□ -1.4
LSG1-202ENST00000427461 C12orf4Q9NQ89 552 aa6.31□□□□□ -1.4
LSG1-202ENST00000427461 FAM30AQ9NZY2 134 aa6.31□□□□□ -1.4
LSG1-202ENST00000427461 GHRLQ9UBU3 117 aa6.31□□□□□ -1.4
LSG1-202ENST00000427461 PUS1Q9Y606 427 aaKnown RBP eCLIP6.31□□□□□ -1.4
LSG1-202ENST00000427461 A0A087WTM6 91 aa6.3□□□□□ -1.4
LSG1-202ENST00000427461 LOC102723971A0A1B0GUV8 181 aa6.3□□□□□ -1.4
LSG1-202ENST00000427461 OGG1O15527 345 aa6.3□□□□□ -1.4
LSG1-202ENST00000427461 LALBAP00709 142 aa6.3□□□□□ -1.4
LSG1-202ENST00000427461 SERPINE2P07093 398 aa6.3□□□□□ -1.4
LSG1-202ENST00000427461 LIMS3P0CW19 117 aa6.3□□□□□ -1.4
LSG1-202ENST00000427461 LIMS4P0CW20 117 aa6.3□□□□□ -1.4
LSG1-202ENST00000427461 OR13C7P0DN81 318 aa6.3□□□□□ -1.4
LSG1-202ENST00000427461 FGF9P31371 208 aaPredicted RBP6.3□□□□□ -1.4
LSG1-202ENST00000427461 TMEM50BP56557 158 aa6.3□□□□□ -1.4
LSG1-202ENST00000427461 NUTF2P61970 127 aaKnown RBP6.3□□□□□ -1.4
LSG1-202ENST00000427461 WT1-ASQ06250 92 aa6.3□□□□□ -1.4
LSG1-202ENST00000427461 CCDC58Q4VC31 144 aa6.3□□□□□ -1.4
LSG1-202ENST00000427461 RNASE12Q5GAN4 147 aaKnown RBP6.3□□□□□ -1.4
LSG1-202ENST00000427461 PSMG4Q5JS54 123 aa6.3□□□□□ -1.4
LSG1-202ENST00000427461 TOMM20LQ6UXN7 152 aa6.3□□□□□ -1.4
LSG1-202ENST00000427461 ARHGAP24Q8N264 748 aa6.3□□□□□ -1.4
LSG1-202ENST00000427461 ZFP41Q8N8Y5 198 aa6.3□□□□□ -1.4
LSG1-202ENST00000427461 OR52I1Q8NGK6 324 aa6.3□□□□□ -1.4
LSG1-202ENST00000427461 DCANP1Q8TF63 244 aa6.3□□□□□ -1.4
LSG1-202ENST00000427461 SMIM19Q96E16 107 aa6.3□□□□□ -1.4
LSG1-202ENST00000427461 CABLES2Q9BTV7 478 aa6.3□□□□□ -1.4
LSG1-202ENST00000427461 GABARAPL3Q9BY60 117 aa6.3□□□□□ -1.4
LSG1-202ENST00000427461 LPAR5Q9H1C0 372 aa6.3□□□□□ -1.4
LSG1-202ENST00000427461 FNDC4Q9H6D8 234 aaPredicted RBP6.3□□□□□ -1.4
LSG1-202ENST00000427461 MRPS7Q9Y2R9 242 aaKnown RBP6.3□□□□□ -1.4
LSG1-202ENST00000427461 PRELID3BQ9Y3B1 194 aa6.3□□□□□ -1.4
LSG1-202ENST00000427461 H3BMM0 161 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms