RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 PDCD5O14737 125 aa10.71□□□□□ -0.69
PDAP1-202ENST00000426447 RAB6AP20340 208 aa10.71□□□□□ -0.69
PDAP1-202ENST00000426447 EIF4EBP1Q13541 118 aaPredicted RBP10.71□□□□□ -0.69
PDAP1-202ENST00000426447 Q56UQ5 140 aa10.71□□□□□ -0.69
PDAP1-202ENST00000426447 CNIH2Q6PI25 160 aa10.71□□□□□ -0.69
PDAP1-202ENST00000426447 SPAG16Q8N0X2 631 aa10.71□□□□□ -0.69
PDAP1-202ENST00000426447 OR10W1Q8NGF6 305 aa10.71□□□□□ -0.69
PDAP1-202ENST00000426447 CHRDL1Q9BU40 450 aa10.71□□□□□ -0.69
PDAP1-202ENST00000426447 RHPN1-AS1Q9BWJ2 59 aa10.71□□□□□ -0.69
PDAP1-202ENST00000426447 C21orf62Q9NYP8 219 aa10.71□□□□□ -0.69
PDAP1-202ENST00000426447 ETV7Q9Y603 341 aa10.71□□□□□ -0.69
PDAP1-202ENST00000426447 TRAV3A0A0B4J244 114 aa10.7□□□□□ -0.7
PDAP1-202ENST00000426447 C15orf62A8K5M9 175 aa10.7□□□□□ -0.7
PDAP1-202ENST00000426447 UPK2O00526 184 aa10.7□□□□□ -0.7
PDAP1-202ENST00000426447 YIF1AO95070 293 aa10.7□□□□□ -0.7
PDAP1-202ENST00000426447 OR13C7P0DN81 318 aa10.7□□□□□ -0.7
PDAP1-202ENST00000426447 PAFAH1B2P68402 229 aa10.7□□□□□ -0.7
PDAP1-202ENST00000426447 FABP5Q01469 135 aa10.7□□□□□ -0.7
PDAP1-202ENST00000426447 GBGT1Q8N5D6 347 aa10.7□□□□□ -0.7
PDAP1-202ENST00000426447 GDPD1Q8N9F7 314 aa10.7□□□□□ -0.7
PDAP1-202ENST00000426447 TMEM116Q8NCL8 245 aa10.7□□□□□ -0.7
PDAP1-202ENST00000426447 QTRT1Q9BXR0 403 aaKnown RBP10.7□□□□□ -0.7
PDAP1-202ENST00000426447 DCSTAMPQ9H295 470 aa10.7□□□□□ -0.7
PDAP1-202ENST00000426447 ACOT13Q9NPJ3 140 aa10.7□□□□□ -0.7
PDAP1-202ENST00000426447 IGHV4-4A0A075B6R2 117 aa10.69□□□□□ -0.7
PDAP1-202ENST00000426447 IGHV3-49A0A0A0MS15 119 aa10.69□□□□□ -0.7
PDAP1-202ENST00000426447 IGHV7-4-1A0A0J9YVY3 117 aa10.69□□□□□ -0.7
PDAP1-202ENST00000426447 IFITM5A6NNB3 132 aa10.69□□□□□ -0.7
PDAP1-202ENST00000426447 CHEK1O14757 476 aa10.69□□□□□ -0.7
PDAP1-202ENST00000426447 SERPINE2P07093 398 aa10.69□□□□□ -0.7
PDAP1-202ENST00000426447 TRAPPC2P0DI81 140 aa10.69□□□□□ -0.7
PDAP1-202ENST00000426447 TRAPPC2BP0DI82 140 aa10.69□□□□□ -0.7
PDAP1-202ENST00000426447 NQO2P16083 231 aa10.69□□□□□ -0.7
PDAP1-202ENST00000426447 OR10A3P58181 314 aa10.69□□□□□ -0.7
PDAP1-202ENST00000426447 TAS2R31P59538 309 aa10.69□□□□□ -0.7
PDAP1-202ENST00000426447 DMBX1Q8NFW5 382 aa10.69□□□□□ -0.7
PDAP1-202ENST00000426447 SCARB1Q8WTV0 552 aa10.69□□□□□ -0.7
PDAP1-202ENST00000426447 SECTM1Q8WVN6 248 aa10.69□□□□□ -0.7
PDAP1-202ENST00000426447 HINT2Q9BX68 163 aa10.69□□□□□ -0.7
PDAP1-202ENST00000426447 HRH4Q9H3N8 390 aa10.69□□□□□ -0.7
PDAP1-202ENST00000426447 CCL28Q9NRJ3 127 aa10.69□□□□□ -0.7
PDAP1-202ENST00000426447 TRAV10A0A0B4J240 114 aa10.68□□□□□ -0.7
PDAP1-202ENST00000426447 M0R2N4 97 aa10.68□□□□□ -0.7
PDAP1-202ENST00000426447 SULT1C2O00338 296 aa10.68□□□□□ -0.7
PDAP1-202ENST00000426447 HPRT1P00492 218 aa10.68□□□□□ -0.7
PDAP1-202ENST00000426447 HLA-DMBP28068 263 aa10.68□□□□□ -0.7
PDAP1-202ENST00000426447 HACD4Q5VWC8 232 aa10.68□□□□□ -0.7
PDAP1-202ENST00000426447 THOC7Q6I9Y2 204 aaKnown RBP10.68□□□□□ -0.7
PDAP1-202ENST00000426447 HSD17B13Q7Z5P4 300 aaPredicted RBP10.68□□□□□ -0.7
PDAP1-202ENST00000426447 ATP6V0BQ99437 205 aa10.68□□□□□ -0.7
PDAP1-202ENST00000426447 CCDC90BQ9GZT6 254 aa10.68□□□□□ -0.7
PDAP1-202ENST00000426447 TRAV14DV4A0A0A6YYC5 116 aa10.67□□□□□ -0.7
PDAP1-202ENST00000426447 TEX50A0A1B0GTY4 177 aa10.67□□□□□ -0.7
PDAP1-202ENST00000426447 C15orf61A6NNL5 157 aa10.67□□□□□ -0.7
PDAP1-202ENST00000426447 DNASE2O00115 360 aaPredicted RBP10.67□□□□□ -0.7
PDAP1-202ENST00000426447 GNG2P59768 71 aa10.67□□□□□ -0.7
PDAP1-202ENST00000426447 RELQ04864 619 aaPredicted RBP10.67□□□□□ -0.7
PDAP1-202ENST00000426447 MLLT11Q13015 90 aaPredicted RBP10.67□□□□□ -0.7
PDAP1-202ENST00000426447 CATR1Q13166 79 aa10.67□□□□□ -0.7
PDAP1-202ENST00000426447 PVRIGQ6DKI7 326 aa10.67□□□□□ -0.7
PDAP1-202ENST00000426447 NUDCD2Q8WVJ2 157 aa10.67□□□□□ -0.7
PDAP1-202ENST00000426447 TMEM140Q9NV12 185 aa10.67□□□□□ -0.7
PDAP1-202ENST00000426447 ANXA10Q9UJ72 324 aa10.67□□□□□ -0.7
PDAP1-202ENST00000426447 IGHV3OR16-13A0A075B7E8 117 aa10.66□□□□□ -0.7
PDAP1-202ENST00000426447 IGHV3-74A0A0B4J1X5 117 aa10.66□□□□□ -0.7
PDAP1-202ENST00000426447 NUPL2O15504 423 aaKnown RBP10.66□□□□□ -0.7
PDAP1-202ENST00000426447 RBFOX2O43251 390 aaKnown RBP eCLIP10.66□□□□□ -0.71e-8■■■■□ 23.8
PDAP1-202ENST00000426447 EIF4EP06730 217 aaKnown RBP10.66□□□□□ -0.7
PDAP1-202ENST00000426447 MYL9P24844 172 aa10.66□□□□□ -0.7
PDAP1-202ENST00000426447 FCGR2CP31995 323 aa10.66□□□□□ -0.7
PDAP1-202ENST00000426447 ARPC4P59998 168 aa10.66□□□□□ -0.7
PDAP1-202ENST00000426447 WT1-ASQ06250 92 aa10.66□□□□□ -0.7
PDAP1-202ENST00000426447 LEMD1Q68G75 181 aa10.66□□□□□ -0.7
PDAP1-202ENST00000426447 Q6ZTC4 211 aa10.66□□□□□ -0.7
PDAP1-202ENST00000426447 STHQ8IWL8 128 aa10.66□□□□□ -0.7
PDAP1-202ENST00000426447 Q8NAQ8 132 aa10.66□□□□□ -0.7
PDAP1-202ENST00000426447 ZBTB34Q8NCN2 500 aa10.66□□□□□ -0.7
PDAP1-202ENST00000426447 OR1L8Q8NGR8 309 aa10.66□□□□□ -0.7
PDAP1-202ENST00000426447 TPRKBQ9Y3C4 175 aa10.66□□□□□ -0.7
PDAP1-202ENST00000426447 F11RQ9Y624 299 aaKnown RBP10.66□□□□□ -0.7
PDAP1-202ENST00000426447 TRAV1-2A0A0B4J238 106 aa10.65□□□□□ -0.7
PDAP1-202ENST00000426447 IGHV4-28A0A0C4DH34 117 aa10.65□□□□□ -0.7
PDAP1-202ENST00000426447 CASQ2O14958 399 aaPredicted RBP10.65□□□□□ -0.7
PDAP1-202ENST00000426447 CTSGP08311 255 aa10.65□□□□□ -0.7
PDAP1-202ENST00000426447 RBMY1A1P0DJD3 496 aaKnown RBP10.65□□□□□ -0.7
PDAP1-202ENST00000426447 RBMY1CP0DJD4 496 aa10.65□□□□□ -0.7
PDAP1-202ENST00000426447 P0DMU3 169 aa10.65□□□□□ -0.7
PDAP1-202ENST00000426447 FAM231AP0DMU4 169 aa10.65□□□□□ -0.7
PDAP1-202ENST00000426447 FAM231CP0DMU5 169 aa10.65□□□□□ -0.7
PDAP1-202ENST00000426447 RAB3BP20337 219 aa10.65□□□□□ -0.7
PDAP1-202ENST00000426447 DEFB131AP59861 70 aa10.65□□□□□ -0.7
PDAP1-202ENST00000426447 RPL11P62913 178 aaKnown RBP10.65□□□□□ -0.7
PDAP1-202ENST00000426447 RBMY1FQ15415 496 aaKnown RBP10.65□□□□□ -0.7
PDAP1-202ENST00000426447 POU2AF1Q16633 256 aa10.65□□□□□ -0.7
PDAP1-202ENST00000426447 TCF24Q7RTU0 167 aa10.65□□□□□ -0.7
PDAP1-202ENST00000426447 POM121L12Q8N7R1 296 aa10.65□□□□□ -0.7
PDAP1-202ENST00000426447 OR13F1Q8NGS4 319 aa10.65□□□□□ -0.7
PDAP1-202ENST00000426447 GIMAP1Q8WWP7 306 aa10.65□□□□□ -0.7
PDAP1-202ENST00000426447 LSM10Q969L4 123 aaKnown RBP10.65□□□□□ -0.7
PDAP1-202ENST00000426447 MGLLQ99685 303 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms