RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 GCN1Q92616 2671 aaKnown RBP13.92□□□□□ -0.18
FN1-208ENST00000426059 PAX1P15863 534 aa13.92□□□□□ -0.18
FN1-208ENST00000426059 HES1Q14469 280 aa13.92□□□□□ -0.18
FN1-208ENST00000426059 PXDC1Q5TGL8 231 aa13.92□□□□□ -0.18
FN1-208ENST00000426059 ETV3LQ6ZN32 361 aa13.92□□□□□ -0.18
FN1-208ENST00000426059 SLC24A4Q8NFF2 622 aa13.92□□□□□ -0.18
FN1-208ENST00000426059 NDUFA4L2Q9NRX3 87 aa13.92□□□□□ -0.18
FN1-208ENST00000426059 FKBP11Q9NYL4 201 aa13.92□□□□□ -0.18
FN1-208ENST00000426059 METTL1Q9UBP6 276 aaKnown RBP13.92□□□□□ -0.18
FN1-208ENST00000426059 ABCA1O95477 2261 aa13.92□□□□□ -0.18
FN1-208ENST00000426059 IFNA4P05014 189 aa13.91□□□□□ -0.18
FN1-208ENST00000426059 GNB1P62873 340 aa13.91□□□□□ -0.18
FN1-208ENST00000426059 Q6ZRG5 221 aa13.91□□□□□ -0.18
FN1-208ENST00000426059 OR5B3Q8NH48 314 aa13.91□□□□□ -0.18
FN1-208ENST00000426059 SCGB1C1Q8TD33 95 aa13.91□□□□□ -0.18
FN1-208ENST00000426059 POLR3KQ9Y2Y1 108 aaPredicted RBP13.91□□□□□ -0.18
FN1-208ENST00000426059 FCN1O00602 326 aa13.91□□□□□ -0.18
FN1-208ENST00000426059 PRH1P02810 166 aa13.91□□□□□ -0.18
FN1-208ENST00000426059 NPY1RP25929 384 aa13.91□□□□□ -0.18
FN1-208ENST00000426059 SAA4P35542 130 aa13.91□□□□□ -0.18
FN1-208ENST00000426059 UBE2E1P51965 193 aa13.91□□□□□ -0.18
FN1-208ENST00000426059 LRRC75BQ2VPJ9 315 aa13.91□□□□□ -0.18
FN1-208ENST00000426059 PIP4P2Q8N4L2 257 aa13.91□□□□□ -0.18
FN1-208ENST00000426059 WDR61Q9GZS3 305 aaKnown RBP13.91□□□□□ -0.18
FN1-208ENST00000426059 CACFD1Q9UGQ2 172 aa13.91□□□□□ -0.18
FN1-208ENST00000426059 SIGLEC9Q9Y336 463 aa13.91□□□□□ -0.18
FN1-208ENST00000426059 CENPVL3A0A0U1RRI6 287 aa13.9□□□□□ -0.18
FN1-208ENST00000426059 A0A1B0GV50 99 aa13.9□□□□□ -0.18
FN1-208ENST00000426059 CRYGBP07316 175 aa13.9□□□□□ -0.18
FN1-208ENST00000426059 SNRNP70P08621 437 aaKnown RBP13.9□□□□□ -0.18
FN1-208ENST00000426059 PAX8Q06710 450 aa13.9□□□□□ -0.18
FN1-208ENST00000426059 MMDQ15546 238 aa13.9□□□□□ -0.18
FN1-208ENST00000426059 TNXAQ16473 311 aa13.9□□□□□ -0.18
FN1-208ENST00000426059 RUSC1-AS1Q66K80 236 aa13.9□□□□□ -0.18
FN1-208ENST00000426059 OR1L8Q8NGR8 309 aa13.9□□□□□ -0.18
FN1-208ENST00000426059 OR4A5Q8NH83 315 aa13.9□□□□□ -0.18
FN1-208ENST00000426059 PINX1Q96BK5 328 aaKnown RBP13.9□□□□□ -0.18
FN1-208ENST00000426059 AJUBAQ96IF1 538 aa13.9□□□□□ -0.18
FN1-208ENST00000426059 PSMG3-AS1Q96PY0 264 aa13.9□□□□□ -0.18
FN1-208ENST00000426059 SMCO3A2RU48 225 aa13.9□□□□□ -0.18
FN1-208ENST00000426059 MFSD2BA6NFX1 497 aa13.9□□□□□ -0.18
FN1-208ENST00000426059 REG1AP05451 166 aa13.9□□□□□ -0.18
FN1-208ENST00000426059 RPP30P78346 268 aaKnown RBP13.9□□□□□ -0.18
FN1-208ENST00000426059 ZNF616Q08AN1 781 aa13.9□□□□□ -0.18
FN1-208ENST00000426059 AANATQ16613 207 aa13.9□□□□□ -0.18
FN1-208ENST00000426059 UQCC1Q9NVA1 299 aa13.9□□□□□ -0.18
FN1-208ENST00000426059 PRSS46E5RG02 174 aa13.89□□□□□ -0.19
FN1-208ENST00000426059 CD1BP29016 333 aa13.89□□□□□ -0.19
FN1-208ENST00000426059 WT1-ASQ06250 92 aa13.89□□□□□ -0.19
FN1-208ENST00000426059 PLGLAQ15195 96 aa13.89□□□□□ -0.19
FN1-208ENST00000426059 PRSS8Q16651 343 aa13.89□□□□□ -0.19
FN1-208ENST00000426059 TUSC1Q2TAM9 212 aa13.89□□□□□ -0.19
FN1-208ENST00000426059 TEX45Q8NA69 505 aa13.89□□□□□ -0.19
FN1-208ENST00000426059 FAM213BQ8TBF2 198 aa13.89□□□□□ -0.19
FN1-208ENST00000426059 TAF15Q92804 592 aaKnown RBP eCLIP13.89□□□□□ -0.191e-6■■■■□ 21.7
FN1-208ENST00000426059 EAF1Q96JC9 268 aaPredicted RBP13.89□□□□□ -0.19
FN1-208ENST00000426059 TMEM147Q9BVK8 224 aa13.89□□□□□ -0.19
FN1-208ENST00000426059 VSIRQ9H7M9 311 aa13.89□□□□□ -0.19
FN1-208ENST00000426059 AGPAT2O15120 278 aa13.89□□□□□ -0.19
FN1-208ENST00000426059 CAMLGP49069 296 aa13.89□□□□□ -0.19
FN1-208ENST00000426059 DSCR9P59020 149 aa13.89□□□□□ -0.19
FN1-208ENST00000426059 BRD3OSQ6XYD6 125 aa13.89□□□□□ -0.19
FN1-208ENST00000426059 PPP1R27Q86WC6 154 aa13.89□□□□□ -0.19
FN1-208ENST00000426059 GNPNAT1Q96EK6 184 aaPredicted RBP13.89□□□□□ -0.19
FN1-208ENST00000426059 MSMBP08118 114 aa13.88□□□□□ -0.19
FN1-208ENST00000426059 HABP2Q14520 560 aaPredicted RBP13.88□□□□□ -0.19
FN1-208ENST00000426059 FAM120AOSQ5T036 256 aa13.88□□□□□ -0.19
FN1-208ENST00000426059 MINOS1Q5TGZ0 78 aa13.88□□□□□ -0.19
FN1-208ENST00000426059 C19orf35Q6ZS72 473 aa13.88□□□□□ -0.19
FN1-208ENST00000426059 MINOS1-NBL1R4GNA1 71 aa13.88□□□□□ -0.19
FN1-208ENST00000426059 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.88□□□□□ -0.191e-33■■■■■ 38
FN1-208ENST00000426059 TRAV40A0A0B4J280 105 aa13.88□□□□□ -0.19
FN1-208ENST00000426059 MOSP00540 346 aa13.88□□□□□ -0.19
FN1-208ENST00000426059 FGF7P21781 194 aa13.88□□□□□ -0.19
FN1-208ENST00000426059 RAB11AP62491 216 aa13.88□□□□□ -0.19
FN1-208ENST00000426059 AKR1C1Q04828 323 aa13.88□□□□□ -0.19
FN1-208ENST00000426059 MLANAQ16655 118 aa13.88□□□□□ -0.19
FN1-208ENST00000426059 DEFB113Q30KQ7 82 aa13.88□□□□□ -0.19
FN1-208ENST00000426059 SAT2Q96F10 170 aaPredicted RBP13.88□□□□□ -0.19
FN1-208ENST00000426059 MED9Q9NWA0 146 aa13.88□□□□□ -0.19
FN1-208ENST00000426059 NPFFO15130 113 aa13.87□□□□□ -0.19
FN1-208ENST00000426059 EIF3GO75821 320 aaKnown RBP eCLIP13.87□□□□□ -0.19
FN1-208ENST00000426059 ACTL6BO94805 426 aa13.87□□□□□ -0.19
FN1-208ENST00000426059 OR13C7P0DN81 318 aa13.87□□□□□ -0.19
FN1-208ENST00000426059 SNCAP37840 140 aa13.87□□□□□ -0.19
FN1-208ENST00000426059 ATP6V1FQ16864 119 aa13.87□□□□□ -0.19
FN1-208ENST00000426059 HIF1ANQ9NWT6 349 aa13.87□□□□□ -0.19
FN1-208ENST00000426059 SOX21Q9Y651 276 aaPredicted RBP13.87□□□□□ -0.19
FN1-208ENST00000426059 RNF223E7ERA6 249 aa13.87□□□□□ -0.19
FN1-208ENST00000426059 LY86O95711 162 aa13.87□□□□□ -0.19
FN1-208ENST00000426059 RNASE2P10153 161 aaKnown RBP13.87□□□□□ -0.19
FN1-208ENST00000426059 ELLP55199 621 aaPredicted RBP13.87□□□□□ -0.19
FN1-208ENST00000426059 SSBP2P81877 361 aaPredicted RBP13.87□□□□□ -0.19
FN1-208ENST00000426059 CCDC144NLQ6NUI1 221 aa13.87□□□□□ -0.19
FN1-208ENST00000426059 MMD2Q8IY49 270 aa13.87□□□□□ -0.19
FN1-208ENST00000426059 C7orf69Q9H7B7 122 aa13.87□□□□□ -0.19
FN1-208ENST00000426059 A0A096LNT2 108 aa13.86□□□□□ -0.19
FN1-208ENST00000426059 SLC25A16P16260 332 aa13.86□□□□□ -0.19
FN1-208ENST00000426059 SRSF3P84103 164 aaKnown RBP13.86□□□□□ -0.19
FN1-208ENST00000426059 ARSJQ5FYB0 599 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms